RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 NRBP2Q9NSY0 501 aa10.01□□□□□ -0.81
HDAC3-211ENST00000491581 TMEM161AQ9NX61 479 aa10.01□□□□□ -0.81
HDAC3-211ENST00000491581 PPP4R2Q9NY27 417 aa10.01□□□□□ -0.81
HDAC3-211ENST00000491581 SUCLA2Q9P2R7 463 aaPredicted RBP10.01□□□□□ -0.81
HDAC3-211ENST00000491581 DNAJB4Q9UDY4 337 aa10.01□□□□□ -0.81
HDAC3-211ENST00000491581 INPP5FQ9Y2H2 1132 aa10.01□□□□□ -0.81
HDAC3-211ENST00000491581 PLXNA3P51805 1871 aa10.01□□□□□ -0.81
HDAC3-211ENST00000491581 IGKV6-21A0A0C4DH24 114 aa10□□□□□ -0.81
HDAC3-211ENST00000491581 CCDC194A0A1B0GVG4 234 aa10□□□□□ -0.81
HDAC3-211ENST00000491581 F8W810 466 aa10□□□□□ -0.81
HDAC3-211ENST00000491581 MAGEB2O15479 319 aa10□□□□□ -0.81
HDAC3-211ENST00000491581 SRGAP2CP0DJJ0 459 aa10□□□□□ -0.81
HDAC3-211ENST00000491581 MYBP10242 640 aa10□□□□□ -0.81
HDAC3-211ENST00000491581 ATP2B1P20020 1258 aa10□□□□□ -0.81
HDAC3-211ENST00000491581 SFNP31947 248 aa10□□□□□ -0.81
HDAC3-211ENST00000491581 SMAD2Q15796 467 aaKnown RBP10□□□□□ -0.81
HDAC3-211ENST00000491581 XKR3Q5GH77 459 aa10□□□□□ -0.81
HDAC3-211ENST00000491581 TMEM31Q5JXX7 168 aa10□□□□□ -0.81
HDAC3-211ENST00000491581 MCTP2Q6DN12 878 aa10□□□□□ -0.81
HDAC3-211ENST00000491581 KCNT2Q6UVM3 1135 aa10□□□□□ -0.81
HDAC3-211ENST00000491581 KRT25Q7Z3Z0 450 aa10□□□□□ -0.81
HDAC3-211ENST00000491581 NEK8Q86SG6 692 aa10□□□□□ -0.81
HDAC3-211ENST00000491581 CDR2LQ86X02 465 aaPredicted RBP10□□□□□ -0.81
HDAC3-211ENST00000491581 TNPO1Q92973 898 aaKnown RBP10□□□□□ -0.81
HDAC3-211ENST00000491581 PLVAPQ9BX97 442 aa10□□□□□ -0.81
HDAC3-211ENST00000491581 VN1R3Q9BXE9 311 aa10□□□□□ -0.81
HDAC3-211ENST00000491581 LMAN2LQ9H0V9 348 aa10□□□□□ -0.81
HDAC3-211ENST00000491581 SMOC2Q9H3U7 446 aa10□□□□□ -0.81
HDAC3-211ENST00000491581 TLE6Q9H808 572 aa10□□□□□ -0.81
HDAC3-211ENST00000491581 IFT122Q9HBG6 1241 aa10□□□□□ -0.81
HDAC3-211ENST00000491581 POLD4Q9HCU8 107 aa10□□□□□ -0.81
HDAC3-211ENST00000491581 C1orf112Q9NSG2 853 aa10□□□□□ -0.81
HDAC3-211ENST00000491581 CACNG4Q9UBN1 327 aa10□□□□□ -0.81
HDAC3-211ENST00000491581 CD207Q9UJ71 328 aa10□□□□□ -0.81
HDAC3-211ENST00000491581 CEP131Q9UPN4 1083 aa10□□□□□ -0.81
HDAC3-211ENST00000491581 USP20Q9Y2K6 914 aa10□□□□□ -0.81
HDAC3-211ENST00000491581 SSUH2Q9Y2M2 353 aa10□□□□□ -0.81
HDAC3-211ENST00000491581 STK36Q9NRP7 1315 aa10□□□□□ -0.81
HDAC3-211ENST00000491581 BDP1A6H8Y1 2624 aa9.99□□□□□ -0.81
HDAC3-211ENST00000491581 FSCN2O14926 492 aa9.99□□□□□ -0.81
HDAC3-211ENST00000491581 MAFO75444 373 aaPredicted RBP9.99□□□□□ -0.81
HDAC3-211ENST00000491581 CA8P35219 290 aa9.99□□□□□ -0.81
HDAC3-211ENST00000491581 NEK4P51957 841 aa9.99□□□□□ -0.81
HDAC3-211ENST00000491581 BCAR1P56945 870 aa9.99□□□□□ -0.81
HDAC3-211ENST00000491581 PPP2R5CQ13362 524 aa9.99□□□□□ -0.81
HDAC3-211ENST00000491581 NBR1Q14596 966 aa9.99□□□□□ -0.81
HDAC3-211ENST00000491581 UBXN11Q5T124 520 aa9.99□□□□□ -0.81
HDAC3-211ENST00000491581 ZNF280BQ86YH2 543 aa9.99□□□□□ -0.81
HDAC3-211ENST00000491581 TEX2Q8IWB9 1127 aa9.99□□□□□ -0.81
HDAC3-211ENST00000491581 EFHBQ8N7U6 833 aa9.99□□□□□ -0.81
HDAC3-211ENST00000491581 C12orf76Q8N812 135 aaPredicted RBP9.99□□□□□ -0.81
HDAC3-211ENST00000491581 PRPF31Q8WWY3 499 aaKnown RBP9.99□□□□□ -0.81
HDAC3-211ENST00000491581 RABGGTAQ92696 567 aa9.99□□□□□ -0.81
HDAC3-211ENST00000491581 GTF3C6Q969F1 213 aa9.99□□□□□ -0.81
HDAC3-211ENST00000491581 CPB2Q96IY4 423 aa9.99□□□□□ -0.81
HDAC3-211ENST00000491581 CEP170P1Q96L14 293 aa9.99□□□□□ -0.81
HDAC3-211ENST00000491581 TCF25Q9BQ70 676 aa9.99□□□□□ -0.81
HDAC3-211ENST00000491581 LXNQ9BS40 222 aa9.99□□□□□ -0.81
HDAC3-211ENST00000491581 TMEM117Q9H0C3 514 aa9.99□□□□□ -0.81
HDAC3-211ENST00000491581 GBP3Q9H0R5 595 aa9.99□□□□□ -0.81
HDAC3-211ENST00000491581 TMEM60Q9H2L4 133 aa9.99□□□□□ -0.81
HDAC3-211ENST00000491581 XPNPEP1Q9NQW7 623 aa9.99□□□□□ -0.81
HDAC3-211ENST00000491581 CYP26B1Q9NR63 512 aa9.99□□□□□ -0.81
HDAC3-211ENST00000491581 TLR9Q9NR96 1032 aa9.99□□□□□ -0.81
HDAC3-211ENST00000491581 PIN4Q9Y237 131 aaKnown RBP9.99□□□□□ -0.81
HDAC3-211ENST00000491581 RWDD3Q9Y3V2 267 aa9.99□□□□□ -0.81
HDAC3-211ENST00000491581 USP15Q9Y4E8 981 aaPredicted RBP9.99□□□□□ -0.81
HDAC3-211ENST00000491581 PCDHB12Q9Y5F1 795 aa9.99□□□□□ -0.81
HDAC3-211ENST00000491581 C2orf16Q68DN1 1984 aa9.99□□□□□ -0.81
HDAC3-211ENST00000491581 TDRD15B5MCY1 1934 aaKnown RBP9.98□□□□□ -0.81
HDAC3-211ENST00000491581 POTEMA6NI47 508 aa9.98□□□□□ -0.81
HDAC3-211ENST00000491581 ZC3H11AO75152 810 aaKnown RBP eCLIP9.98□□□□□ -0.81
HDAC3-211ENST00000491581 DDHD2O94830 711 aa9.98□□□□□ -0.81
HDAC3-211ENST00000491581 RPLP2P05387 115 aaKnown RBP9.98□□□□□ -0.81
HDAC3-211ENST00000491581 ZSCAN20P17040 1043 aaPredicted RBP9.98□□□□□ -0.81
HDAC3-211ENST00000491581 TMOD1P28289 359 aa9.98□□□□□ -0.81
HDAC3-211ENST00000491581 KRT2P35908 639 aa9.98□□□□□ -0.81
HDAC3-211ENST00000491581 PHKA2P46019 1235 aa9.98□□□□□ -0.81
HDAC3-211ENST00000491581 QARSP47897 775 aaKnown RBP9.98□□□□□ -0.81
HDAC3-211ENST00000491581 PSMC5P62195 406 aa9.98□□□□□ -0.81
HDAC3-211ENST00000491581 SMAD4Q13485 552 aaKnown RBP9.98□□□□□ -0.81
HDAC3-211ENST00000491581 KCNC3Q14003 757 aa9.98□□□□□ -0.81
HDAC3-211ENST00000491581 DUSP6Q16828 381 aa9.98□□□□□ -0.81
HDAC3-211ENST00000491581 TWF2Q6IBS0 349 aaKnown RBP9.98□□□□□ -0.81
HDAC3-211ENST00000491581 SYCE2Q6PIF2 218 aa9.98□□□□□ -0.81
HDAC3-211ENST00000491581 CPLX2Q6PUV4 134 aaKnown RBP9.98□□□□□ -0.81
HDAC3-211ENST00000491581 MAEAQ7L5Y9 396 aa9.98□□□□□ -0.81
HDAC3-211ENST00000491581 RNF135Q8IUD6 432 aa9.98□□□□□ -0.81
HDAC3-211ENST00000491581 CCDC83Q8IWF9 413 aa9.98□□□□□ -0.81
HDAC3-211ENST00000491581 TPH2Q8IWU9 490 aa9.98□□□□□ -0.81
HDAC3-211ENST00000491581 ADHFE1Q8IWW8 467 aa9.98□□□□□ -0.81
HDAC3-211ENST00000491581 SLC39A11Q8N1S5 342 aa9.98□□□□□ -0.81
HDAC3-211ENST00000491581 SMRP1Q8NCR6 262 aa9.98□□□□□ -0.81
HDAC3-211ENST00000491581 ASAP3Q8TDY4 903 aa9.98□□□□□ -0.81
HDAC3-211ENST00000491581 PIGOQ8TEQ8 1089 aa9.98□□□□□ -0.81
HDAC3-211ENST00000491581 MRPS27Q92552 414 aaKnown RBP9.98□□□□□ -0.81
HDAC3-211ENST00000491581 RPGRIP1Q96KN7 1286 aa9.98□□□□□ -0.81
HDAC3-211ENST00000491581 C1QTNF1Q9BXJ1 281 aa9.98□□□□□ -0.81
HDAC3-211ENST00000491581 EIF2AQ9BY44 585 aaKnown RBP9.98□□□□□ -0.81
HDAC3-211ENST00000491581 CXCL16Q9H2A7 254 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms