RNA–Protein interactions for RNA: ENST00000491094.6

VPS72-205, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 5

Gene VPS72, Length 4,267 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-205ENST00000491094 SUCLA2Q9P2R7 463 aaPredicted RBP12.06□□□□□ -0.48
VPS72-205ENST00000491094 ANKRD36CQ5JPF3 1778 aa12.06□□□□□ -0.48
VPS72-205ENST00000491094 GH2P01242 217 aa12.06□□□□□ -0.48
VPS72-205ENST00000491094 JAMLQ86YT9 394 aa12.06□□□□□ -0.48
VPS72-205ENST00000491094 GDAP1Q8TB36 358 aa12.06□□□□□ -0.48
VPS72-205ENST00000491094 NEK9Q8TD19 979 aa12.06□□□□□ -0.48
VPS72-205ENST00000491094 RFFLQ8WZ73 363 aa12.06□□□□□ -0.48
VPS72-205ENST00000491094 SLC12A6Q9UHW9 1150 aa12.06□□□□□ -0.48
VPS72-205ENST00000491094 TRAF3IP3Q9Y228 551 aa12.06□□□□□ -0.48
VPS72-205ENST00000491094 IRS2Q9Y4H2 1338 aa12.06□□□□□ -0.48
VPS72-205ENST00000491094 EIF4E1BA6NMX2 242 aaKnown RBP12.06□□□□□ -0.48
VPS72-205ENST00000491094 GAS7O60861 476 aa12.06□□□□□ -0.48
VPS72-205ENST00000491094 SNHG28P0DPA3 235 aa12.06□□□□□ -0.48
VPS72-205ENST00000491094 DLG4P78352 724 aa12.06□□□□□ -0.48
VPS72-205ENST00000491094 MYL7Q01449 175 aa12.06□□□□□ -0.48
VPS72-205ENST00000491094 EPC2Q52LR7 807 aa12.06□□□□□ -0.48
VPS72-205ENST00000491094 LRRC34Q8IZ02 419 aa12.06□□□□□ -0.48
VPS72-205ENST00000491094 XPO6Q96QU8 1125 aaKnown RBP12.06□□□□□ -0.48
VPS72-205ENST00000491094 ERP44Q9BS26 406 aa12.06□□□□□ -0.48
VPS72-205ENST00000491094 INTS2Q9H0H0 1204 aaKnown RBP12.06□□□□□ -0.48
VPS72-205ENST00000491094 PARVGQ9HBI0 331 aa12.06□□□□□ -0.48
VPS72-205ENST00000491094 A0A1B0GUL6 1792 aa12.05□□□□□ -0.48
VPS72-205ENST00000491094 TCRBV7S2A1N4TA0A589 114 aa12.05□□□□□ -0.48
VPS72-205ENST00000491094 FSBPO95073 299 aa12.05□□□□□ -0.48
VPS72-205ENST00000491094 IL1R1P14778 569 aa12.05□□□□□ -0.48
VPS72-205ENST00000491094 LMNB1P20700 586 aa12.05□□□□□ -0.48
VPS72-205ENST00000491094 DCAF12L1Q5VU92 463 aa12.05□□□□□ -0.48
VPS72-205ENST00000491094 LRIG3Q6UXM1 1119 aa12.05□□□□□ -0.48
VPS72-205ENST00000491094 SPATS2Q86XZ4 545 aaKnown RBP12.05□□□□□ -0.48
VPS72-205ENST00000491094 SLC30A5Q8TAD4 765 aa12.05□□□□□ -0.48
VPS72-205ENST00000491094 C1orf54Q8WWF1 131 aa12.05□□□□□ -0.48
VPS72-205ENST00000491094 MTFR1LQ9H019 292 aa12.05□□□□□ -0.48
VPS72-205ENST00000491094 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.05□□□□□ -0.48
VPS72-205ENST00000491094 ATF5Q9Y2D1 282 aaPredicted RBP12.05□□□□□ -0.48
VPS72-205ENST00000491094 STK38LQ9Y2H1 464 aa12.05□□□□□ -0.48
VPS72-205ENST00000491094 SSTR3P32745 418 aaPredicted RBP12.05□□□□□ -0.48
VPS72-205ENST00000491094 NF2P35240 595 aa12.05□□□□□ -0.48
VPS72-205ENST00000491094 MAP2K1Q02750 393 aaPredicted RBP12.05□□□□□ -0.48
VPS72-205ENST00000491094 SNCBQ16143 134 aa12.05□□□□□ -0.48
VPS72-205ENST00000491094 LONRF1Q17RB8 773 aa12.05□□□□□ -0.48
VPS72-205ENST00000491094 KIAA1755Q5JYT7 1200 aa12.05□□□□□ -0.48
VPS72-205ENST00000491094 CCDC197Q8NCU1 140 aa12.05□□□□□ -0.48
VPS72-205ENST00000491094 CHMP6Q96FZ7 201 aa12.05□□□□□ -0.48
VPS72-205ENST00000491094 SLITRK6Q9H5Y7 841 aa12.05□□□□□ -0.48
VPS72-205ENST00000491094 CHUKO15111 745 aa12.05□□□□□ -0.48
VPS72-205ENST00000491094 SCTRP47872 440 aa12.05□□□□□ -0.48
VPS72-205ENST00000491094 CYB5D1Q6P9G0 228 aa12.05□□□□□ -0.48
VPS72-205ENST00000491094 RPUSD2Q8IZ73 545 aaKnown RBP12.05□□□□□ -0.48
VPS72-205ENST00000491094 ZKSCAN4Q969J2 545 aaPredicted RBP12.05□□□□□ -0.48
VPS72-205ENST00000491094 TACO1Q9BSH4 297 aaKnown RBP12.05□□□□□ -0.48
VPS72-205ENST00000491094 SAMD15Q9P1V8 674 aa12.05□□□□□ -0.48
VPS72-205ENST00000491094 COG5Q9UP83 839 aa12.05□□□□□ -0.48
VPS72-205ENST00000491094 SCAF8Q9UPN6 1271 aaKnown RBP12.05□□□□□ -0.48
VPS72-205ENST00000491094 NDUFB10O96000 172 aa12.04□□□□□ -0.48
VPS72-205ENST00000491094 PHLDB3Q6NSJ2 640 aa12.04□□□□□ -0.48
VPS72-205ENST00000491094 CAPN12Q6ZSI9 719 aa12.04□□□□□ -0.48
VPS72-205ENST00000491094 PARP9Q8IXQ6 854 aa12.04□□□□□ -0.48
VPS72-205ENST00000491094 RNF25Q96BH1 459 aaPredicted RBP12.04□□□□□ -0.48
VPS72-205ENST00000491094 CALR3Q96L12 384 aaKnown RBP12.04□□□□□ -0.48
VPS72-205ENST00000491094 ASIC3Q9UHC3 531 aa12.04□□□□□ -0.48
VPS72-205ENST00000491094 ODF2LQ9ULJ1 636 aa12.04□□□□□ -0.48
VPS72-205ENST00000491094 ARHGEF35A5YM69 484 aa12.04□□□□□ -0.48
VPS72-205ENST00000491094 TMEM150BA6NC51 233 aa12.04□□□□□ -0.48
VPS72-205ENST00000491094 K7ENM7 598 aa12.04□□□□□ -0.48
VPS72-205ENST00000491094 CCDC137Q6PK04 289 aaKnown RBP12.04□□□□□ -0.48
VPS72-205ENST00000491094 HOOK3Q86VS8 718 aa12.04□□□□□ -0.48
VPS72-205ENST00000491094 ZSWIM2Q8NEG5 633 aa12.04□□□□□ -0.48
VPS72-205ENST00000491094 ETNPPLQ8TBG4 499 aa12.04□□□□□ -0.48
VPS72-205ENST00000491094 CXorf56Q9H5V9 222 aa12.04□□□□□ -0.48
VPS72-205ENST00000491094 TDRD3Q9H7E2 651 aaKnown RBP12.04□□□□□ -0.48
VPS72-205ENST00000491094 RASAL2Q9UJF2 1139 aa12.04□□□□□ -0.48
VPS72-205ENST00000491094 EMSYQ7Z589 1322 aa12.04□□□□□ -0.48
VPS72-205ENST00000491094 PITPNM2Q9BZ72 1349 aa12.04□□□□□ -0.48
VPS72-205ENST00000491094 BBOX1O75936 387 aa12.04□□□□□ -0.48
VPS72-205ENST00000491094 MARSP56192 900 aaKnown RBP12.04□□□□□ -0.48
VPS72-205ENST00000491094 HP1BP3Q5SSJ5 553 aaPredicted RBP12.04□□□□□ -0.48
VPS72-205ENST00000491094 ANKS4BQ8N8V4 417 aa12.04□□□□□ -0.48
VPS72-205ENST00000491094 N4BP2L2Q92802 583 aaPredicted RBP12.04□□□□□ -0.48
VPS72-205ENST00000491094 STK33Q9BYT3 514 aa12.04□□□□□ -0.48
VPS72-205ENST00000491094 CCDC172P0C7W6 258 aa12.03□□□□□ -0.48
VPS72-205ENST00000491094 CREB1P16220 341 aa12.03□□□□□ -0.48
VPS72-205ENST00000491094 COMTP21964 271 aa12.03□□□□□ -0.48
VPS72-205ENST00000491094 CRKP46108 304 aa12.03□□□□□ -0.48
VPS72-205ENST00000491094 TNIP1Q15025 636 aa12.03□□□□□ -0.48
VPS72-205ENST00000491094 ABCB5Q2M3G0 1257 aa12.03□□□□□ -0.48
VPS72-205ENST00000491094 ANKRD20A8PQ5CZ79 823 aa12.03□□□□□ -0.48
VPS72-205ENST00000491094 SYDE2Q5VT97 1194 aa12.03□□□□□ -0.48
VPS72-205ENST00000491094 SEPT14Q6ZU15 432 aa12.03□□□□□ -0.48
VPS72-205ENST00000491094 FUKQ8N0W3 1084 aa12.03□□□□□ -0.48
VPS72-205ENST00000491094 FAM212AQ96EL1 285 aa12.03□□□□□ -0.48
VPS72-205ENST00000491094 PWWP2AQ96N64 755 aa12.03□□□□□ -0.48
VPS72-205ENST00000491094 DNAJC18Q9H819 358 aa12.03□□□□□ -0.48
VPS72-205ENST00000491094 MTRF1LQ9UGC7 380 aaKnown RBP12.03□□□□□ -0.48
VPS72-205ENST00000491094 SWAP70Q9UH65 585 aa12.03□□□□□ -0.48
VPS72-205ENST00000491094 PPEF1O14829 653 aaPredicted RBP12.03□□□□□ -0.48
VPS72-205ENST00000491094 SORBS3O60504 671 aa12.03□□□□□ -0.48
VPS72-205ENST00000491094 GBP2P32456 591 aaPredicted RBP12.03□□□□□ -0.48
VPS72-205ENST00000491094 ECE1P42892 770 aa12.03□□□□□ -0.48
VPS72-205ENST00000491094 RPL21P46778 160 aaKnown RBP12.03□□□□□ -0.48
VPS72-205ENST00000491094 SMTNP53814 917 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms