RNA–Protein interactions for RNA: ENST00000490999.5

SCAMP3-208, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 2

Gene SCAMP3, Length 1,011 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-208ENST00000490999 USTQ9Y2C2 406 aa17.35■□□□□ 0.37
SCAMP3-208ENST00000490999 EVPLQ92817 2033 aa17.35■□□□□ 0.37
SCAMP3-208ENST00000490999 A0A0U1RQF3 1178 aa17.34■□□□□ 0.37
SCAMP3-208ENST00000490999 B4GALT3O60512 393 aa17.34■□□□□ 0.37
SCAMP3-208ENST00000490999 SSBP05455 408 aaKnown RBP eCLIP17.34■□□□□ 0.37
SCAMP3-208ENST00000490999 PSAPP07602 524 aa17.34■□□□□ 0.37
SCAMP3-208ENST00000490999 PRKCEQ02156 737 aa17.34■□□□□ 0.37
SCAMP3-208ENST00000490999 FUT2Q10981 343 aa17.34■□□□□ 0.37
SCAMP3-208ENST00000490999 DRP2Q13474 957 aa17.34■□□□□ 0.37
SCAMP3-208ENST00000490999 TDGQ13569 410 aa17.34■□□□□ 0.37
SCAMP3-208ENST00000490999 PTPN14Q15678 1187 aa17.34■□□□□ 0.37
SCAMP3-208ENST00000490999 UGCGQ16739 394 aa17.34■□□□□ 0.37
SCAMP3-208ENST00000490999 ZNF746Q6NUN9 644 aaPredicted RBP17.34■□□□□ 0.37
SCAMP3-208ENST00000490999 APOA5Q6Q788 366 aa17.34■□□□□ 0.37
SCAMP3-208ENST00000490999 PLCD3Q8N3E9 789 aa17.34■□□□□ 0.37
SCAMP3-208ENST00000490999 KCNG4Q8TDN1 519 aa17.34■□□□□ 0.37
SCAMP3-208ENST00000490999 RMDN1Q96DB5 314 aa17.34■□□□□ 0.37
SCAMP3-208ENST00000490999 LSG1Q9H089 658 aaKnown RBP17.34■□□□□ 0.37
SCAMP3-208ENST00000490999 SFXN1Q9H9B4 322 aa17.34■□□□□ 0.37
SCAMP3-208ENST00000490999 BARHL2Q9NY43 387 aa17.34■□□□□ 0.37
SCAMP3-208ENST00000490999 DUSP12Q9UNI6 340 aa17.34■□□□□ 0.37
SCAMP3-208ENST00000490999 CEP131Q9UPN4 1083 aa17.34■□□□□ 0.37
SCAMP3-208ENST00000490999 SAMM50Q9Y512 469 aa17.34■□□□□ 0.37
SCAMP3-208ENST00000490999 R4GN57 208 aa17.34■□□□□ 0.37
SCAMP3-208ENST00000490999 V9GY48 417 aaPredicted RBP17.34■□□□□ 0.37
SCAMP3-208ENST00000490999 ZFHX4Q86UP3 3567 aa17.34■□□□□ 0.37
SCAMP3-208ENST00000490999 ZNF862O60290 1169 aa17.33■□□□□ 0.36
SCAMP3-208ENST00000490999 OATP04181 439 aa17.33■□□□□ 0.36
SCAMP3-208ENST00000490999 CFHP08603 1231 aa17.33■□□□□ 0.36
SCAMP3-208ENST00000490999 CTSAP10619 480 aa17.33■□□□□ 0.36
SCAMP3-208ENST00000490999 BMS1Q14692 1282 aaKnown RBP17.33■□□□□ 0.36
SCAMP3-208ENST00000490999 RTN1Q16799 776 aa17.33■□□□□ 0.36
SCAMP3-208ENST00000490999 SGMS1Q86VZ5 419 aa17.33■□□□□ 0.36
SCAMP3-208ENST00000490999 RSAD2Q8WXG1 361 aa17.33■□□□□ 0.36
SCAMP3-208ENST00000490999 RIN2Q8WYP3 895 aaPredicted RBP17.33■□□□□ 0.36
SCAMP3-208ENST00000490999 ACSF2Q96CM8 615 aaPredicted RBP17.33■□□□□ 0.36
SCAMP3-208ENST00000490999 IGSF21Q96ID5 467 aa17.33■□□□□ 0.36
SCAMP3-208ENST00000490999 KCNK12Q9HB15 430 aa17.33■□□□□ 0.36
SCAMP3-208ENST00000490999 TBC1D13Q9NVG8 400 aa17.33■□□□□ 0.36
SCAMP3-208ENST00000490999 DNAJB4Q9UDY4 337 aa17.33■□□□□ 0.36
SCAMP3-208ENST00000490999 MYO10Q9HD67 2058 aa17.33■□□□□ 0.36
SCAMP3-208ENST00000490999 EPG5Q9HCE0 2579 aa17.32■□□□□ 0.36
SCAMP3-208ENST00000490999 MAGEB2O15479 319 aa17.32■□□□□ 0.36
SCAMP3-208ENST00000490999 CHMP2AO43633 222 aa17.32■□□□□ 0.36
SCAMP3-208ENST00000490999 N4BP1O75113 896 aaKnown RBP17.32■□□□□ 0.36
SCAMP3-208ENST00000490999 MYBP10242 640 aa17.32■□□□□ 0.36
SCAMP3-208ENST00000490999 TMOD1P28289 359 aa17.32■□□□□ 0.36
SCAMP3-208ENST00000490999 PRR16Q569H4 304 aa17.32■□□□□ 0.36
SCAMP3-208ENST00000490999 CREB3L3Q68CJ9 461 aa17.32■□□□□ 0.36
SCAMP3-208ENST00000490999 OTOP3Q7RTS5 596 aa17.32■□□□□ 0.36
SCAMP3-208ENST00000490999 GPR149Q86SP6 731 aa17.32■□□□□ 0.36
SCAMP3-208ENST00000490999 DDX53Q86TM3 631 aaKnown RBP17.32■□□□□ 0.36
SCAMP3-208ENST00000490999 SMAP1Q8IYB5 467 aaPredicted RBP17.32■□□□□ 0.36
SCAMP3-208ENST00000490999 KIAA2013Q8IYS2 634 aa17.32■□□□□ 0.36
SCAMP3-208ENST00000490999 CRYGNQ8WXF5 182 aa17.32■□□□□ 0.36
SCAMP3-208ENST00000490999 FAM167AQ96KS9 214 aa17.32■□□□□ 0.36
SCAMP3-208ENST00000490999 NRDE2Q9H7Z3 1164 aa17.32■□□□□ 0.36
SCAMP3-208ENST00000490999 RBM28Q9NW13 759 aaKnown RBP17.32■□□□□ 0.36
SCAMP3-208ENST00000490999 BRPF3Q9ULD4 1205 aa17.32■□□□□ 0.36
SCAMP3-208ENST00000490999 PCDHA10Q9Y5I2 948 aa17.32■□□□□ 0.36
SCAMP3-208ENST00000490999 TMEM150BA6NC51 233 aa17.31■□□□□ 0.36
SCAMP3-208ENST00000490999 GOLGA8AA7E2F4 631 aa17.31■□□□□ 0.36
SCAMP3-208ENST00000490999 GOLGA8BA8MQT2 603 aa17.31■□□□□ 0.36
SCAMP3-208ENST00000490999 PHKA2P46019 1235 aa17.31■□□□□ 0.36
SCAMP3-208ENST00000490999 SLC11A1P49279 550 aa17.31■□□□□ 0.36
SCAMP3-208ENST00000490999 SETQ01105 290 aaPredicted RBP17.31■□□□□ 0.36
SCAMP3-208ENST00000490999 TWF2Q6IBS0 349 aaKnown RBP17.31■□□□□ 0.36
SCAMP3-208ENST00000490999 SYNE3Q6ZMZ3 975 aa17.31■□□□□ 0.36
SCAMP3-208ENST00000490999 SH2D3AQ9BRG2 576 aa17.31■□□□□ 0.36
SCAMP3-208ENST00000490999 TBC1D22BQ9NU19 505 aa17.31■□□□□ 0.36
SCAMP3-208ENST00000490999 DACT1Q9NYF0 836 aa17.31■□□□□ 0.36
SCAMP3-208ENST00000490999 CA14Q9ULX7 337 aa17.31■□□□□ 0.36
SCAMP3-208ENST00000490999 PIN4Q9Y237 131 aaKnown RBP17.31■□□□□ 0.36
SCAMP3-208ENST00000490999 IRAK3Q9Y616 596 aa17.31■□□□□ 0.36
SCAMP3-208ENST00000490999 WDR64B1ANS9 1081 aa17.3■□□□□ 0.36
SCAMP3-208ENST00000490999 STK25O00506 426 aa17.3■□□□□ 0.36
SCAMP3-208ENST00000490999 ZBTB43O43298 467 aa17.3■□□□□ 0.36
SCAMP3-208ENST00000490999 GALTP07902 379 aa17.3■□□□□ 0.36
SCAMP3-208ENST00000490999 RFX1P22670 979 aa17.3■□□□□ 0.36
SCAMP3-208ENST00000490999 CLCN4P51793 760 aa17.3■□□□□ 0.36
SCAMP3-208ENST00000490999 POLGP54098 1239 aaPredicted RBP17.3■□□□□ 0.36
SCAMP3-208ENST00000490999 RNASELQ05823 741 aaKnown RBP17.3■□□□□ 0.36
SCAMP3-208ENST00000490999 SPECC1Q5M775 1068 aa17.3■□□□□ 0.36
SCAMP3-208ENST00000490999 GLB1LQ6UWU2 654 aa17.3■□□□□ 0.36
SCAMP3-208ENST00000490999 GJA10Q969M2 543 aa17.3■□□□□ 0.36
SCAMP3-208ENST00000490999 RTP3Q9BQQ7 232 aa17.3■□□□□ 0.36
SCAMP3-208ENST00000490999 CEP250Q9BV73 2442 aa17.3■□□□□ 0.36
SCAMP3-208ENST00000490999 KRBA1A5PL33 1030 aa17.29■□□□□ 0.36
SCAMP3-208ENST00000490999 hCG_1984214I3L0E3 225 aa17.29■□□□□ 0.36
SCAMP3-208ENST00000490999 C2CD2LO14523 706 aa17.29■□□□□ 0.36
SCAMP3-208ENST00000490999 LMNAP02545 664 aaKnown RBP17.29■□□□□ 0.36
SCAMP3-208ENST00000490999 CYP3A4P08684 503 aa17.29■□□□□ 0.36
SCAMP3-208ENST00000490999 CNPP09543 421 aaKnown RBP17.29■□□□□ 0.36
SCAMP3-208ENST00000490999 KLRC2P26717 231 aa17.29■□□□□ 0.36
SCAMP3-208ENST00000490999 CDC27P30260 824 aa17.29■□□□□ 0.36
SCAMP3-208ENST00000490999 TBC1D8BQ0IIM8 1120 aa17.29■□□□□ 0.36
SCAMP3-208ENST00000490999 LETM2Q2VYF4 491 aa17.29■□□□□ 0.36
SCAMP3-208ENST00000490999 NOMO2Q5JPE7 1267 aa17.29■□□□□ 0.36
SCAMP3-208ENST00000490999 DGLUCYQ7Z3D6 616 aa17.29■□□□□ 0.36
SCAMP3-208ENST00000490999 ZNF280BQ86YH2 543 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms