RNA–Protein interactions for RNA: ENST00000490869.1

UBA1-209, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

TSL 2

Gene UBA1, Length 917 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-209ENST00000490869 TRIM29Q14134 588 aa12.21□□□□□ -0.45
UBA1-209ENST00000490869 LRRC55Q6ZSA7 311 aa12.21□□□□□ -0.45
UBA1-209ENST00000490869 RBM23Q86U06 439 aaKnown RBP12.21□□□□□ -0.45
UBA1-209ENST00000490869 KSR1Q8IVT5 923 aa12.21□□□□□ -0.45
UBA1-209ENST00000490869 C4orf19Q8IY42 314 aa12.21□□□□□ -0.45
UBA1-209ENST00000490869 LRRC43Q8N309 656 aa12.21□□□□□ -0.45
UBA1-209ENST00000490869 ZNF579Q8NAF0 562 aaKnown RBP12.21□□□□□ -0.45
UBA1-209ENST00000490869 MICAL1Q8TDZ2 1067 aa12.21□□□□□ -0.45
UBA1-209ENST00000490869 SLC7A3Q8WY07 619 aa12.21□□□□□ -0.45
UBA1-209ENST00000490869 DYDC2Q96IM9 177 aa12.21□□□□□ -0.45
UBA1-209ENST00000490869 CEP170P1Q96L14 293 aa12.21□□□□□ -0.45
UBA1-209ENST00000490869 NLRP4Q96MN2 994 aa12.21□□□□□ -0.45
UBA1-209ENST00000490869 LXNQ9BS40 222 aa12.21□□□□□ -0.45
UBA1-209ENST00000490869 INO80BQ9C086 356 aaPredicted RBP12.21□□□□□ -0.45
UBA1-209ENST00000490869 TLR9Q9NR96 1032 aa12.21□□□□□ -0.45
UBA1-209ENST00000490869 CHST12Q9NRB3 414 aa12.21□□□□□ -0.45
UBA1-209ENST00000490869 RGL1Q9NZL6 768 aa12.21□□□□□ -0.45
UBA1-209ENST00000490869 PPME1Q9Y570 386 aa12.21□□□□□ -0.45
UBA1-209ENST00000490869 PCDHGC5Q9Y5F6 944 aa12.21□□□□□ -0.45
UBA1-209ENST00000490869 BTBD18B2RXH4 712 aa12.2□□□□□ -0.46
UBA1-209ENST00000490869 MBTPS2O43462 519 aa12.2□□□□□ -0.46
UBA1-209ENST00000490869 EOMESO95936 686 aa12.2□□□□□ -0.46
UBA1-209ENST00000490869 YWHABP31946 246 aaKnown RBP12.2□□□□□ -0.46
UBA1-209ENST00000490869 RFC5P40937 340 aa12.2□□□□□ -0.46
UBA1-209ENST00000490869 POLGP54098 1239 aaPredicted RBP12.2□□□□□ -0.46
UBA1-209ENST00000490869 SPIRE1Q08AE8 756 aa12.2□□□□□ -0.46
UBA1-209ENST00000490869 ST3GAL1Q11201 340 aa12.2□□□□□ -0.46
UBA1-209ENST00000490869 CTTNQ14247 550 aaKnown RBP12.2□□□□□ -0.46
UBA1-209ENST00000490869 CLLU1OSQ5K130 101 aa12.2□□□□□ -0.46
UBA1-209ENST00000490869 ZNF598Q86UK7 904 aaKnown RBP12.2□□□□□ -0.46
UBA1-209ENST00000490869 DIS3L2Q8IYB7 885 aaKnown RBP12.2□□□□□ -0.46
UBA1-209ENST00000490869 EXOC8Q8IYI6 725 aa12.2□□□□□ -0.46
UBA1-209ENST00000490869 EFHBQ8N7U6 833 aa12.2□□□□□ -0.46
UBA1-209ENST00000490869 HELQQ8TDG4 1101 aa12.2□□□□□ -0.46
UBA1-209ENST00000490869 BMP2KQ9NSY1 1161 aaPredicted RBP12.2□□□□□ -0.46
UBA1-209ENST00000490869 PRKAG3Q9UGI9 489 aa12.2□□□□□ -0.46
UBA1-209ENST00000490869 CD207Q9UJ71 328 aa12.2□□□□□ -0.46
UBA1-209ENST00000490869 PIN4Q9Y237 131 aaKnown RBP12.2□□□□□ -0.46
UBA1-209ENST00000490869 COL4A3BPQ9Y5P4 624 aa12.2□□□□□ -0.46
UBA1-209ENST00000490869 PI4K2BG5E9Z4 385 aa12.19□□□□□ -0.46
UBA1-209ENST00000490869 ATF7P17544 494 aaPredicted RBP12.19□□□□□ -0.46
UBA1-209ENST00000490869 PPM1AP35813 382 aa12.19□□□□□ -0.46
UBA1-209ENST00000490869 PBX3P40426 434 aa12.19□□□□□ -0.46
UBA1-209ENST00000490869 ERVFC1P60507 584 aa12.19□□□□□ -0.46
UBA1-209ENST00000490869 PLCB3Q01970 1234 aa12.19□□□□□ -0.46
UBA1-209ENST00000490869 CYP4A11Q02928 519 aa12.19□□□□□ -0.46
UBA1-209ENST00000490869 ZP2Q05996 745 aa12.19□□□□□ -0.46
UBA1-209ENST00000490869 SMAD4Q13485 552 aaKnown RBP12.19□□□□□ -0.46
UBA1-209ENST00000490869 SMAD2Q15796 467 aaKnown RBP12.19□□□□□ -0.46
UBA1-209ENST00000490869 CALCRLQ16602 461 aa12.19□□□□□ -0.46
UBA1-209ENST00000490869 TWF2Q6IBS0 349 aaKnown RBP12.19□□□□□ -0.46
UBA1-209ENST00000490869 PDE12Q6L8Q7 609 aaKnown RBP12.19□□□□□ -0.46
UBA1-209ENST00000490869 KCNT2Q6UVM3 1135 aa12.19□□□□□ -0.46
UBA1-209ENST00000490869 OTUD6AQ7L8S5 288 aa12.19□□□□□ -0.46
UBA1-209ENST00000490869 CATSPER4Q7RTX7 472 aa12.19□□□□□ -0.46
UBA1-209ENST00000490869 ADHFE1Q8IWW8 467 aa12.19□□□□□ -0.46
UBA1-209ENST00000490869 PSPC1Q8WXF1 523 aaKnown RBP12.19□□□□□ -0.46
UBA1-209ENST00000490869 MRPS27Q92552 414 aaKnown RBP12.19□□□□□ -0.46
UBA1-209ENST00000490869 TMEM143Q96AN5 459 aa12.19□□□□□ -0.46
UBA1-209ENST00000490869 MSLNLQ96KJ4 702 aa12.19□□□□□ -0.46
UBA1-209ENST00000490869 ZNF558Q96NG5 402 aa12.19□□□□□ -0.46
UBA1-209ENST00000490869 DHX33Q9H6R0 707 aaKnown RBP12.19□□□□□ -0.46
UBA1-209ENST00000490869 ZSWIM4Q9H7M6 989 aa12.19□□□□□ -0.46
UBA1-209ENST00000490869 TLE6Q9H808 572 aa12.19□□□□□ -0.46
UBA1-209ENST00000490869 IFT122Q9HBG6 1241 aa12.19□□□□□ -0.46
UBA1-209ENST00000490869 PCDHA12Q9UN75 941 aa12.19□□□□□ -0.46
UBA1-209ENST00000490869 LZTS1Q9Y250 596 aa12.19□□□□□ -0.46
UBA1-209ENST00000490869 WNT7AO00755 349 aa12.18□□□□□ -0.46
UBA1-209ENST00000490869 FSCN2O14926 492 aa12.18□□□□□ -0.46
UBA1-209ENST00000490869 PER2O15055 1255 aa12.18□□□□□ -0.46
UBA1-209ENST00000490869 NEMFO60524 1076 aa12.18□□□□□ -0.46
UBA1-209ENST00000490869 SLITRK3O94933 977 aa12.18□□□□□ -0.46
UBA1-209ENST00000490869 GLP2RO95838 553 aa12.18□□□□□ -0.46
UBA1-209ENST00000490869 SKIP12755 728 aa12.18□□□□□ -0.46
UBA1-209ENST00000490869 PHKA2P46019 1235 aa12.18□□□□□ -0.46
UBA1-209ENST00000490869 EMC2Q15006 297 aa12.18□□□□□ -0.46
UBA1-209ENST00000490869 XKR9Q5GH70 373 aa12.18□□□□□ -0.46
UBA1-209ENST00000490869 TMEM31Q5JXX7 168 aa12.18□□□□□ -0.46
UBA1-209ENST00000490869 PLPP4Q5VZY2 271 aa12.18□□□□□ -0.46
UBA1-209ENST00000490869 TPH2Q8IWU9 490 aa12.18□□□□□ -0.46
UBA1-209ENST00000490869 TCP11Q8WWU5 503 aa12.18□□□□□ -0.46
UBA1-209ENST00000490869 PRPF31Q8WWY3 499 aaKnown RBP12.18□□□□□ -0.46
UBA1-209ENST00000490869 CDCA3Q99618 268 aaPredicted RBP12.18□□□□□ -0.46
UBA1-209ENST00000490869 TCF25Q9BQ70 676 aa12.18□□□□□ -0.46
UBA1-209ENST00000490869 EIF2AK1Q9BQI3 630 aaKnown RBP12.18□□□□□ -0.46
UBA1-209ENST00000490869 TRAIPQ9BWF2 469 aa12.18□□□□□ -0.46
UBA1-209ENST00000490869 MRPL9Q9BYD2 267 aaKnown RBP12.18□□□□□ -0.46
UBA1-209ENST00000490869 TTC12Q9H892 705 aaPredicted RBP12.18□□□□□ -0.46
UBA1-209ENST00000490869 ENTPD7Q9NQZ7 604 aa12.18□□□□□ -0.46
UBA1-209ENST00000490869 FAM105AQ9NUU6 356 aa12.18□□□□□ -0.46
UBA1-209ENST00000490869 CLEC1BQ9P126 229 aa12.18□□□□□ -0.46
UBA1-209ENST00000490869 RAPGEFL1Q9UHV5 662 aa12.18□□□□□ -0.46
UBA1-209ENST00000490869 PUF60Q9UHX1 559 aaKnown RBP12.18□□□□□ -0.46
UBA1-209ENST00000490869 BARX2Q9UMQ3 279 aaPredicted RBP12.18□□□□□ -0.46
UBA1-209ENST00000490869 LIMCH1Q9UPQ0 1083 aa12.18□□□□□ -0.46
UBA1-209ENST00000490869 MUC3AQ02505 3323 aa12.17□□□□□ -0.46
UBA1-209ENST00000490869 TTC28Q96AY4 2481 aa12.17□□□□□ -0.46
UBA1-209ENST00000490869 ARID2Q68CP9 1835 aa12.17□□□□□ -0.46
UBA1-209ENST00000490869 FSD2A1L4K1 749 aa12.17□□□□□ -0.46
UBA1-209ENST00000490869 C19orf67A6NJJ6 358 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms