RNA–Protein interactions for RNA: ENST00000488912.5

COL21A1-211, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL21A1, Length 2,327 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-211ENST00000488912 ASAP3Q8TDY4 903 aa12.01□□□□□ -0.49
COL21A1-211ENST00000488912 SPIRE2Q8WWL2 714 aa12.01□□□□□ -0.49
COL21A1-211ENST00000488912 NTPCRQ9BSD7 190 aaKnown RBP12.01□□□□□ -0.49
COL21A1-211ENST00000488912 TUT1Q9H6E5 874 aaKnown RBP12.01□□□□□ -0.49
COL21A1-211ENST00000488912 KMT5AQ9NQR1 393 aa12.01□□□□□ -0.49
COL21A1-211ENST00000488912 ZNF215Q9UL58 517 aaPredicted RBP12.01□□□□□ -0.49
COL21A1-211ENST00000488912 GPR25O00155 361 aa12□□□□□ -0.49
COL21A1-211ENST00000488912 N4BP3O15049 544 aa12□□□□□ -0.49
COL21A1-211ENST00000488912 FGFR1OPO95684 399 aaKnown RBP12□□□□□ -0.49
COL21A1-211ENST00000488912 AKR1A1P14550 325 aa12□□□□□ -0.49
COL21A1-211ENST00000488912 GLRA2P23416 452 aa12□□□□□ -0.49
COL21A1-211ENST00000488912 ARL2P36404 184 aa12□□□□□ -0.49
COL21A1-211ENST00000488912 ADAM9Q13443 819 aa12□□□□□ -0.49
COL21A1-211ENST00000488912 TMC6Q7Z403 805 aa12□□□□□ -0.49
COL21A1-211ENST00000488912 VSTM4Q8IW00 320 aa12□□□□□ -0.49
COL21A1-211ENST00000488912 SLC17A8Q8NDX2 589 aa12□□□□□ -0.49
COL21A1-211ENST00000488912 ZBTB10Q96DT7 871 aa12□□□□□ -0.49
COL21A1-211ENST00000488912 IFT74Q96LB3 600 aa12□□□□□ -0.49
COL21A1-211ENST00000488912 CEP63Q96MT8 703 aa12□□□□□ -0.49
COL21A1-211ENST00000488912 TUBGCP2Q9BSJ2 902 aa12□□□□□ -0.49
COL21A1-211ENST00000488912 BRCA2P51587 3418 aa12□□□□□ -0.49
COL21A1-211ENST00000488912 IGKV6-21A0A0C4DH24 114 aa12□□□□□ -0.49
COL21A1-211ENST00000488912 CLIC2O15247 247 aa12□□□□□ -0.49
COL21A1-211ENST00000488912 NR3C1P04150 777 aa12□□□□□ -0.49
COL21A1-211ENST00000488912 INSRRP14616 1297 aa12□□□□□ -0.49
COL21A1-211ENST00000488912 ELNP15502 786 aa12□□□□□ -0.49
COL21A1-211ENST00000488912 MTIF2P46199 727 aaKnown RBP12□□□□□ -0.49
COL21A1-211ENST00000488912 MKRN4PQ13434 485 aaPredicted RBP12□□□□□ -0.49
COL21A1-211ENST00000488912 FILIP1LQ4L180 1135 aa12□□□□□ -0.49
COL21A1-211ENST00000488912 FILIP1Q7Z7B0 1213 aa12□□□□□ -0.49
COL21A1-211ENST00000488912 SYCP3Q8IZU3 236 aa12□□□□□ -0.49
COL21A1-211ENST00000488912 LRRC71Q8N4P6 559 aa12□□□□□ -0.49
COL21A1-211ENST00000488912 IPO4Q8TEX9 1081 aaKnown RBP12□□□□□ -0.49
COL21A1-211ENST00000488912 CCDC94Q9BW85 323 aaPredicted RBP12□□□□□ -0.49
COL21A1-211ENST00000488912 GBP3Q9H0R5 595 aa12□□□□□ -0.49
COL21A1-211ENST00000488912 SUGCTQ9HAC7 445 aa12□□□□□ -0.49
COL21A1-211ENST00000488912 AGPAT3Q9NRZ7 376 aa12□□□□□ -0.49
COL21A1-211ENST00000488912 SRRDQ9UH36 339 aa12□□□□□ -0.49
COL21A1-211ENST00000488912 DENND3A2RUS2 1198 aa11.99□□□□□ -0.49
COL21A1-211ENST00000488912 GOLGA6L6A8MZA4 724 aa11.99□□□□□ -0.49
COL21A1-211ENST00000488912 TISP43B9A030 160 aa11.99□□□□□ -0.49
COL21A1-211ENST00000488912 IGBP1P78318 339 aa11.99□□□□□ -0.49
COL21A1-211ENST00000488912 HS2ST1Q7LGA3 356 aa11.99□□□□□ -0.49
COL21A1-211ENST00000488912 ACCSQ96QU6 501 aa11.99□□□□□ -0.49
COL21A1-211ENST00000488912 TMEM206Q9H813 350 aa11.99□□□□□ -0.49
COL21A1-211ENST00000488912 ARHGAP28Q9P2N2 729 aa11.99□□□□□ -0.49
COL21A1-211ENST00000488912 TBX20Q9UMR3 447 aa11.99□□□□□ -0.49
COL21A1-211ENST00000488912 CEP350Q5VT06 3117 aa11.99□□□□□ -0.49
COL21A1-211ENST00000488912 UQCRHLA0A096LP55 91 aa11.99□□□□□ -0.49
COL21A1-211ENST00000488912 CETN3O15182 167 aa11.99□□□□□ -0.49
COL21A1-211ENST00000488912 C22orf31O95567 290 aa11.99□□□□□ -0.49
COL21A1-211ENST00000488912 UQCRHP07919 91 aa11.99□□□□□ -0.49
COL21A1-211ENST00000488912 NAMPTP43490 491 aa11.99□□□□□ -0.49
COL21A1-211ENST00000488912 CPT1AP50416 773 aa11.99□□□□□ -0.49
COL21A1-211ENST00000488912 BEX3Q00994 111 aa11.99□□□□□ -0.49
COL21A1-211ENST00000488912 CACNB2Q08289 660 aaPredicted RBP11.99□□□□□ -0.49
COL21A1-211ENST00000488912 ZNF484Q5JVG2 852 aa11.99□□□□□ -0.49
COL21A1-211ENST00000488912 MIIPQ5JXC2 388 aa11.99□□□□□ -0.49
COL21A1-211ENST00000488912 CCDC186Q7Z3E2 898 aa11.99□□□□□ -0.49
COL21A1-211ENST00000488912 AP5M1Q9H0R1 490 aa11.99□□□□□ -0.49
COL21A1-211ENST00000488912 Q9Y3F1 56 aa11.99□□□□□ -0.49
COL21A1-211ENST00000488912 LRRIQ4A6NIV6 560 aa11.98□□□□□ -0.49
COL21A1-211ENST00000488912 LGALS16A8MUM7 142 aa11.98□□□□□ -0.49
COL21A1-211ENST00000488912 PES1O00541 588 aaKnown RBP11.98□□□□□ -0.49
COL21A1-211ENST00000488912 GAS2O43903 313 aaKnown RBP11.98□□□□□ -0.49
COL21A1-211ENST00000488912 F2P00734 622 aa11.98□□□□□ -0.49
COL21A1-211ENST00000488912 RPL13P26373 211 aaKnown RBP11.98□□□□□ -0.49
COL21A1-211ENST00000488912 CNGA1P29973 690 aa11.98□□□□□ -0.49
COL21A1-211ENST00000488912 PBX1P40424 430 aa11.98□□□□□ -0.49
COL21A1-211ENST00000488912 CLCN3P51790 818 aa11.98□□□□□ -0.49
COL21A1-211ENST00000488912 CAPSQ13938 189 aa11.98□□□□□ -0.49
COL21A1-211ENST00000488912 PPP2R5AQ15172 486 aa11.98□□□□□ -0.49
COL21A1-211ENST00000488912 NFIL3Q16649 462 aa11.98□□□□□ -0.49
COL21A1-211ENST00000488912 CCDC40Q4G0X9 1142 aa11.98□□□□□ -0.49
COL21A1-211ENST00000488912 TAS1R3Q7RTX0 852 aa11.98□□□□□ -0.49
COL21A1-211ENST00000488912 MAP4K3Q8IVH8 894 aa11.98□□□□□ -0.49
COL21A1-211ENST00000488912 EXOC8Q8IYI6 725 aa11.98□□□□□ -0.49
COL21A1-211ENST00000488912 PRPF31Q8WWY3 499 aaKnown RBP11.98□□□□□ -0.49
COL21A1-211ENST00000488912 KAT2BQ92831 832 aa11.98□□□□□ -0.49
COL21A1-211ENST00000488912 HVCN1Q96D96 273 aa11.98□□□□□ -0.49
COL21A1-211ENST00000488912 NOC4LQ9BVI4 516 aaKnown RBP11.98□□□□□ -0.49
COL21A1-211ENST00000488912 TRIP12Q14669 1992 aaPredicted RBP11.98□□□□□ -0.49
COL21A1-211ENST00000488912 MYADML2A6NDP7 307 aa11.98□□□□□ -0.49
COL21A1-211ENST00000488912 DUSP11O75319 330 aaKnown RBP11.98□□□□□ -0.49
COL21A1-211ENST00000488912 AKAP3O75969 853 aa11.98□□□□□ -0.49
COL21A1-211ENST00000488912 GNA14O95837 355 aa11.98□□□□□ -0.49
COL21A1-211ENST00000488912 PRKAR2AP13861 404 aaKnown RBP11.98□□□□□ -0.49
COL21A1-211ENST00000488912 HOXD10P28358 340 aa11.98□□□□□ -0.49
COL21A1-211ENST00000488912 CASP4P49662 377 aa11.98□□□□□ -0.49
COL21A1-211ENST00000488912 MARSP56192 900 aaKnown RBP11.98□□□□□ -0.49
COL21A1-211ENST00000488912 UBXN1Q04323 297 aa11.98□□□□□ -0.49
COL21A1-211ENST00000488912 PPFIA1Q13136 1202 aa11.98□□□□□ -0.49
COL21A1-211ENST00000488912 FSCN1Q16658 493 aaKnown RBP11.98□□□□□ -0.49
COL21A1-211ENST00000488912 IER5Q5VY09 327 aa11.98□□□□□ -0.49
COL21A1-211ENST00000488912 CEP135Q66GS9 1140 aa11.98□□□□□ -0.49
COL21A1-211ENST00000488912 SPECC1LQ69YQ0 1117 aa11.98□□□□□ -0.49
COL21A1-211ENST00000488912 EFCAB12Q6NXP0 572 aa11.98□□□□□ -0.49
COL21A1-211ENST00000488912 METTL13Q8N6R0 699 aa11.98□□□□□ -0.49
COL21A1-211ENST00000488912 GOLGA5Q8TBA6 731 aa11.98□□□□□ -0.49
COL21A1-211ENST00000488912 ZNF296Q8WUU4 475 aaPredicted RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms