RNA–Protein interactions for RNA: ENST00000488558.2

CUL4A-209, Transcript of cullin 4A, humanhuman

TSL 3 BASIC

Gene CUL4A, Length 1,111 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-209ENST00000488558 CWH43Q9H720 699 aa25.84■■□□□ 1.73
CUL4A-209ENST00000488558 TYW1Q9NV66 732 aaKnown RBP25.84■■□□□ 1.73
CUL4A-209ENST00000488558 MYO7AQ13402 2215 aa25.84■■□□□ 1.73
CUL4A-209ENST00000488558 LYPLA2O95372 231 aa25.83■■□□□ 1.73
CUL4A-209ENST00000488558 FGFR4P22455 802 aa25.83■■□□□ 1.73
CUL4A-209ENST00000488558 PTCRAQ6ISU1 281 aaPredicted RBP25.83■■□□□ 1.73
CUL4A-209ENST00000488558 CCDC83Q8IWF9 413 aa25.83■■□□□ 1.73
CUL4A-209ENST00000488558 ABI1Q8IZP0 508 aa25.83■■□□□ 1.73
CUL4A-209ENST00000488558 COLGALT1Q8NBJ5 622 aa25.83■■□□□ 1.73
CUL4A-209ENST00000488558 CASD1Q96PB1 797 aa25.83■■□□□ 1.73
CUL4A-209ENST00000488558 KIF2CQ99661 725 aa25.83■■□□□ 1.73
CUL4A-209ENST00000488558 SH2B1Q9NRF2 756 aaPredicted RBP25.83■■□□□ 1.73
CUL4A-209ENST00000488558 CLDND1Q9NY35 253 aa25.83■■□□□ 1.73
CUL4A-209ENST00000488558 RGL1Q9NZL6 768 aa25.83■■□□□ 1.73
CUL4A-209ENST00000488558 COL4A3BPQ9Y5P4 624 aa25.83■■□□□ 1.73
CUL4A-209ENST00000488558 GRXCR2A6NFK2 248 aa25.82■■□□□ 1.72
CUL4A-209ENST00000488558 FOSBP53539 338 aa25.82■■□□□ 1.72
CUL4A-209ENST00000488558 HMGN5P82970 282 aaKnown RBP25.82■■□□□ 1.72
CUL4A-209ENST00000488558 ZNF579Q8NAF0 562 aaKnown RBP25.82■■□□□ 1.72
CUL4A-209ENST00000488558 PSPC1Q8WXF1 523 aaKnown RBP25.82■■□□□ 1.72
CUL4A-209ENST00000488558 C8orf76Q96K31 380 aa25.82■■□□□ 1.72
CUL4A-209ENST00000488558 NLRP4Q96MN2 994 aa25.82■■□□□ 1.72
CUL4A-209ENST00000488558 MTMR9Q96QG7 549 aa25.82■■□□□ 1.72
CUL4A-209ENST00000488558 HSD17B14Q9BPX1 270 aa25.82■■□□□ 1.72
CUL4A-209ENST00000488558 TTC12Q9H892 705 aaPredicted RBP25.82■■□□□ 1.72
CUL4A-209ENST00000488558 FAM50BQ9Y247 325 aa25.82■■□□□ 1.72
CUL4A-209ENST00000488558 H3BQ06 376 aaPredicted RBP25.81■■□□□ 1.72
CUL4A-209ENST00000488558 WNT7AO00755 349 aa25.81■■□□□ 1.72
CUL4A-209ENST00000488558 CSDE1O75534 798 aaKnown RBP25.81■■□□□ 1.72
CUL4A-209ENST00000488558 SLITRK3O94933 977 aa25.81■■□□□ 1.72
CUL4A-209ENST00000488558 ATF7P17544 494 aaPredicted RBP25.81■■□□□ 1.72
CUL4A-209ENST00000488558 LTBRP36941 435 aa25.81■■□□□ 1.72
CUL4A-209ENST00000488558 CYP4A11Q02928 519 aa25.81■■□□□ 1.72
CUL4A-209ENST00000488558 ORC2Q13416 577 aaPredicted RBP25.81■■□□□ 1.72
CUL4A-209ENST00000488558 TCP11Q8WWU5 503 aa25.81■■□□□ 1.72
CUL4A-209ENST00000488558 EIF2AK1Q9BQI3 630 aaKnown RBP25.81■■□□□ 1.72
CUL4A-209ENST00000488558 IFT122Q9HBG6 1241 aa25.81■■□□□ 1.72
CUL4A-209ENST00000488558 LZTS1Q9Y250 596 aa25.81■■□□□ 1.72
CUL4A-209ENST00000488558 FGF18O76093 207 aa25.8■■□□□ 1.72
CUL4A-209ENST00000488558 SKIP12755 728 aa25.8■■□□□ 1.72
CUL4A-209ENST00000488558 RBM25P49756 843 aaKnown RBP25.8■■□□□ 1.72
CUL4A-209ENST00000488558 CTTNQ14247 550 aaKnown RBP25.8■■□□□ 1.72
CUL4A-209ENST00000488558 EMC2Q15006 297 aa25.8■■□□□ 1.72
CUL4A-209ENST00000488558 CLLU1OSQ5K130 101 aa25.8■■□□□ 1.72
CUL4A-209ENST00000488558 KSR1Q8IVT5 923 aa25.8■■□□□ 1.72
CUL4A-209ENST00000488558 FAM178BQ8IXR5 827 aa25.8■■□□□ 1.72
CUL4A-209ENST00000488558 THNSL1Q8IYQ7 743 aa25.8■■□□□ 1.72
CUL4A-209ENST00000488558 PRPF31Q8WWY3 499 aaKnown RBP25.8■■□□□ 1.72
CUL4A-209ENST00000488558 MRPL9Q9BYD2 267 aaKnown RBP25.8■■□□□ 1.72
CUL4A-209ENST00000488558 HCSTQ9UBK5 93 aa25.8■■□□□ 1.72
CUL4A-209ENST00000488558 ASAP2O43150 1006 aa25.79■■□□□ 1.72
CUL4A-209ENST00000488558 IL9P15248 144 aa25.79■■□□□ 1.72
CUL4A-209ENST00000488558 IRS1P35568 1242 aa25.79■■□□□ 1.72
CUL4A-209ENST00000488558 PPM1AP35813 382 aa25.79■■□□□ 1.72
CUL4A-209ENST00000488558 PHKA2P46019 1235 aa25.79■■□□□ 1.72
CUL4A-209ENST00000488558 RAB27AP51159 221 aa25.79■■□□□ 1.72
CUL4A-209ENST00000488558 PLCB3Q01970 1234 aa25.79■■□□□ 1.72
CUL4A-209ENST00000488558 XKR9Q5GH70 373 aa25.79■■□□□ 1.72
CUL4A-209ENST00000488558 PDE12Q6L8Q7 609 aaKnown RBP25.79■■□□□ 1.72
CUL4A-209ENST00000488558 LRRC55Q6ZSA7 311 aa25.79■■□□□ 1.72
CUL4A-209ENST00000488558 CATSPER4Q7RTX7 472 aa25.79■■□□□ 1.72
CUL4A-209ENST00000488558 SRGAP1Q7Z6B7 1085 aa25.79■■□□□ 1.72
CUL4A-209ENST00000488558 FOXP1Q9H334 677 aaPredicted RBP25.79■■□□□ 1.72
CUL4A-209ENST00000488558 TLR9Q9NR96 1032 aa25.79■■□□□ 1.72
CUL4A-209ENST00000488558 ANKEF1Q9NU02 776 aa25.79■■□□□ 1.72
CUL4A-209ENST00000488558 AGPAT5Q9NUQ2 364 aa25.79■■□□□ 1.72
CUL4A-209ENST00000488558 PIN4Q9Y237 131 aaKnown RBP25.79■■□□□ 1.72
CUL4A-209ENST00000488558 FSD2A1L4K1 749 aa25.78■■□□□ 1.72
CUL4A-209ENST00000488558 TXKP42681 527 aa25.78■■□□□ 1.72
CUL4A-209ENST00000488558 TWF2Q6IBS0 349 aaKnown RBP25.78■■□□□ 1.72
CUL4A-209ENST00000488558 EP400NLQ6ZTU2 488 aa25.78■■□□□ 1.72
CUL4A-209ENST00000488558 TPH2Q8IWU9 490 aa25.78■■□□□ 1.72
CUL4A-209ENST00000488558 EFHBQ8N7U6 833 aa25.78■■□□□ 1.72
CUL4A-209ENST00000488558 RNF169Q8NCN4 708 aa25.78■■□□□ 1.72
CUL4A-209ENST00000488558 FBXO18Q8NFZ0 1043 aa25.78■■□□□ 1.72
CUL4A-209ENST00000488558 TMEM143Q96AN5 459 aa25.78■■□□□ 1.72
CUL4A-209ENST00000488558 MTRQ99707 1265 aa25.78■■□□□ 1.72
CUL4A-209ENST00000488558 TBX10O75333 385 aa25.77■■□□□ 1.72
CUL4A-209ENST00000488558 CSPG5O95196 566 aa25.77■■□□□ 1.72
CUL4A-209ENST00000488558 GUCY1B3Q02153 619 aa25.77■■□□□ 1.72
CUL4A-209ENST00000488558 LAMTOR4Q0VGL1 99 aa25.77■■□□□ 1.72
CUL4A-209ENST00000488558 ADAM15Q13444 863 aa25.77■■□□□ 1.72
CUL4A-209ENST00000488558 PCBP1Q15365 356 aaKnown RBP eCLIP25.77■■□□□ 1.72
CUL4A-209ENST00000488558 KCNT2Q6UVM3 1135 aa25.77■■□□□ 1.72
CUL4A-209ENST00000488558 FERMT3Q86UX7 667 aa25.77■■□□□ 1.72
CUL4A-209ENST00000488558 ZNF558Q96NG5 402 aa25.77■■□□□ 1.72
CUL4A-209ENST00000488558 PRKAG3Q9UGI9 489 aa25.77■■□□□ 1.72
CUL4A-209ENST00000488558 ZNF623O75123 536 aa25.76■■□□□ 1.71
CUL4A-209ENST00000488558 GTF2F1P35269 517 aaKnown RBP eCLIP25.76■■□□□ 1.718e-7■□□□□ 10.9
CUL4A-209ENST00000488558 ADGRD2Q7Z7M1 963 aa25.76■■□□□ 1.71
CUL4A-209ENST00000488558 HELQQ8TDG4 1101 aa25.76■■□□□ 1.71
CUL4A-209ENST00000488558 MRPS27Q92552 414 aaKnown RBP25.76■■□□□ 1.71
CUL4A-209ENST00000488558 TMEM60Q9H2L4 133 aa25.76■■□□□ 1.71
CUL4A-209ENST00000488558 IGFLR1Q9H665 355 aa25.76■■□□□ 1.71
CUL4A-209ENST00000488558 XPNPEP1Q9NQW7 623 aa25.76■■□□□ 1.71
CUL4A-209ENST00000488558 FAM105AQ9NUU6 356 aa25.76■■□□□ 1.71
CUL4A-209ENST00000488558 CARNS1A5YM72 827 aa25.75■■□□□ 1.71
CUL4A-209ENST00000488558 FSCN2O14926 492 aa25.75■■□□□ 1.71
CUL4A-209ENST00000488558 ZBTB39O15060 712 aa25.75■■□□□ 1.71
CUL4A-209ENST00000488558 DGAT1O75907 488 aa25.75■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms