RNA–Protein interactions for RNA: ENST00000488353.2

RER1-207, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RER1, Length 2,469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-207ENST00000488353 FKBP3Q00688 224 aaKnown RBP15.38■□□□□ 0.05
RER1-207ENST00000488353 PSMD2Q13200 908 aa15.38■□□□□ 0.05
RER1-207ENST00000488353 RAPGEF1Q13905 1077 aa15.38■□□□□ 0.05
RER1-207ENST00000488353 FAM26FQ5R3K3 315 aa15.38■□□□□ 0.05
RER1-207ENST00000488353 RASGEF1CQ8N431 466 aa15.38■□□□□ 0.05
RER1-207ENST00000488353 SPDYE1Q8NFV5 336 aaPredicted RBP15.38■□□□□ 0.05
RER1-207ENST00000488353 TXLNGYQ9BZA5 131 aa15.38■□□□□ 0.05
RER1-207ENST00000488353 KIAA1024Q9UPX6 916 aa15.38■□□□□ 0.05
RER1-207ENST00000488353 USP17L10C9JJH3 530 aa15.37■□□□□ 0.05
RER1-207ENST00000488353 SNUPNO95149 360 aaKnown RBP15.37■□□□□ 0.05
RER1-207ENST00000488353 RARAP10276 462 aa15.37■□□□□ 0.05
RER1-207ENST00000488353 PECAM1P16284 738 aaPredicted RBP15.37■□□□□ 0.05
RER1-207ENST00000488353 CCNG1P51959 295 aa15.37■□□□□ 0.05
RER1-207ENST00000488353 ZNF543Q08ER8 600 aa15.37■□□□□ 0.05
RER1-207ENST00000488353 MKRN4PQ13434 485 aaPredicted RBP15.37■□□□□ 0.05
RER1-207ENST00000488353 STRIP1Q5VSL9 837 aa15.37■□□□□ 0.05
RER1-207ENST00000488353 LRRC57Q8N9N7 239 aa15.37■□□□□ 0.05
RER1-207ENST00000488353 PARD3BQ8TEW8 1205 aa15.37■□□□□ 0.05
RER1-207ENST00000488353 ANKRD27Q96NW4 1050 aa15.37■□□□□ 0.05
RER1-207ENST00000488353 ADAM7Q9H2U9 754 aa15.37■□□□□ 0.05
RER1-207ENST00000488353 ABCF3Q9NUQ8 709 aa15.37■□□□□ 0.05
RER1-207ENST00000488353 FAM198AQ9UFP1 575 aa15.37■□□□□ 0.05
RER1-207ENST00000488353 PNMA6FA0A0J9YX94 578 aa15.37■□□□□ 0.05
RER1-207ENST00000488353 UBOX5O94941 541 aa15.37■□□□□ 0.05
RER1-207ENST00000488353 PDE6CP51160 858 aa15.37■□□□□ 0.05
RER1-207ENST00000488353 ASIC2Q16515 512 aa15.37■□□□□ 0.05
RER1-207ENST00000488353 STYK1Q6J9G0 422 aa15.37■□□□□ 0.05
RER1-207ENST00000488353 CHADLQ6NUI6 762 aa15.37■□□□□ 0.05
RER1-207ENST00000488353 ZBTB10Q96DT7 871 aa15.37■□□□□ 0.05
RER1-207ENST00000488353 PRMT1Q99873 361 aaKnown RBP15.37■□□□□ 0.05
RER1-207ENST00000488353 LRRC27Q9C0I9 530 aa15.37■□□□□ 0.05
RER1-207ENST00000488353 RAB17Q9H0T7 212 aa15.37■□□□□ 0.05
RER1-207ENST00000488353 DPH5Q9H2P9 285 aa15.37■□□□□ 0.05
RER1-207ENST00000488353 ECT2Q9H8V3 914 aa15.37■□□□□ 0.05
RER1-207ENST00000488353 A6NHS1 94 aa15.36■□□□□ 0.05
RER1-207ENST00000488353 USP17L15C9J2P7 530 aa15.36■□□□□ 0.05
RER1-207ENST00000488353 USP17L13C9JLJ4 530 aa15.36■□□□□ 0.05
RER1-207ENST00000488353 USP17L11C9JVI0 530 aa15.36■□□□□ 0.05
RER1-207ENST00000488353 USP17L18D6R9N7 530 aa15.36■□□□□ 0.05
RER1-207ENST00000488353 USP17L22D6RA61 530 aa15.36■□□□□ 0.05
RER1-207ENST00000488353 USP17L17D6RBQ6 530 aa15.36■□□□□ 0.05
RER1-207ENST00000488353 USP17L19D6RCP7 530 aa15.36■□□□□ 0.05
RER1-207ENST00000488353 USP17L20D6RJB6 530 aa15.36■□□□□ 0.05
RER1-207ENST00000488353 hCG_1984214I3L0E3 225 aa15.36■□□□□ 0.05
RER1-207ENST00000488353 ZBTB48P10074 688 aaPredicted RBP15.36■□□□□ 0.05
RER1-207ENST00000488353 ITGA4P13612 1032 aa15.36■□□□□ 0.05
RER1-207ENST00000488353 ATP2A2P16615 1042 aaKnown RBP15.36■□□□□ 0.05
RER1-207ENST00000488353 CDC25CP30307 473 aa15.36■□□□□ 0.05
RER1-207ENST00000488353 USP17L24Q0WX57 530 aa15.36■□□□□ 0.05
RER1-207ENST00000488353 SF3A3Q12874 501 aaKnown RBP eCLIP15.36■□□□□ 0.054e-9■■■■□ 20.9
RER1-207ENST00000488353 SLC15A2Q16348 729 aa15.36■□□□□ 0.05
RER1-207ENST00000488353 ZCWPW2Q504Y3 356 aa15.36■□□□□ 0.05
RER1-207ENST00000488353 HERC4Q5GLZ8 1057 aaPredicted RBP15.36■□□□□ 0.05
RER1-207ENST00000488353 USP17L6PQ6QN14 398 aa15.36■□□□□ 0.05
RER1-207ENST00000488353 SH3BP5LQ7L8J4 393 aa15.36■□□□□ 0.05
RER1-207ENST00000488353 CROCCP2Q86T23 111 aa15.36■□□□□ 0.05
RER1-207ENST00000488353 ZNF713Q8N859 430 aaPredicted RBP15.36■□□□□ 0.05
RER1-207ENST00000488353 FAM133AQ8N9E0 248 aa15.36■□□□□ 0.05
RER1-207ENST00000488353 KLHL29Q96CT2 875 aa15.36■□□□□ 0.05
RER1-207ENST00000488353 IFT74Q96LB3 600 aa15.36■□□□□ 0.05
RER1-207ENST00000488353 PABPC3Q9H361 631 aaKnown RBP15.36■□□□□ 0.05
RER1-207ENST00000488353 GOLPH3Q9H4A6 298 aa15.36■□□□□ 0.05
RER1-207ENST00000488353 BMP2KQ9NSY1 1161 aaPredicted RBP15.36■□□□□ 0.05
RER1-207ENST00000488353 CPSF2Q9P2I0 782 aaKnown RBP15.36■□□□□ 0.05
RER1-207ENST00000488353 UTRNP46939 3433 aa15.36■□□□□ 0.05
RER1-207ENST00000488353 POTEB3A0JP26 581 aa15.36■□□□□ 0.05
RER1-207ENST00000488353 POTECB2RU33 542 aa15.36■□□□□ 0.05
RER1-207ENST00000488353 IGF2BP3O00425 579 aaKnown RBP eCLIP15.36■□□□□ 0.05
RER1-207ENST00000488353 RGS16O15492 202 aaPredicted RBP15.36■□□□□ 0.05
RER1-207ENST00000488353 SNX3O60493 162 aa15.36■□□□□ 0.05
RER1-207ENST00000488353 FESP07332 822 aa15.36■□□□□ 0.05
RER1-207ENST00000488353 STAT3P40763 770 aa15.36■□□□□ 0.05
RER1-207ENST00000488353 GALNTL6Q49A17 601 aa15.36■□□□□ 0.05
RER1-207ENST00000488353 ANKRD20A2Q5SQ80 823 aa15.36■□□□□ 0.05
RER1-207ENST00000488353 ANKRD20A1Q5TYW2 823 aa15.36■□□□□ 0.05
RER1-207ENST00000488353 ANKRD20A3Q5VUR7 823 aa15.36■□□□□ 0.05
RER1-207ENST00000488353 POTEBQ6S5H4 581 aa15.36■□□□□ 0.05
RER1-207ENST00000488353 PEX26Q7Z412 305 aa15.36■□□□□ 0.05
RER1-207ENST00000488353 CELF4Q9BZC1 486 aaKnown RBP15.36■□□□□ 0.05
RER1-207ENST00000488353 YIPF3Q9GZM5 350 aa15.36■□□□□ 0.05
RER1-207ENST00000488353 PSTPIP2Q9H939 334 aa15.36■□□□□ 0.05
RER1-207ENST00000488353 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.36■□□□□ 0.05
RER1-207ENST00000488353 AHCYL1O43865 530 aa15.35■□□□□ 0.05
RER1-207ENST00000488353 DENND2CQ68D51 928 aa15.35■□□□□ 0.05
RER1-207ENST00000488353 GPBP1Q86WP2 473 aa15.35■□□□□ 0.05
RER1-207ENST00000488353 TEX9Q8N6V9 391 aa15.35■□□□□ 0.05
RER1-207ENST00000488353 NEK9Q8TD19 979 aa15.35■□□□□ 0.05
RER1-207ENST00000488353 TDRD3Q9H7E2 651 aaKnown RBP15.35■□□□□ 0.05
RER1-207ENST00000488353 TLDC2A0PJX2 215 aa15.35■□□□□ 0.05
RER1-207ENST00000488353 AGTP01019 485 aa15.35■□□□□ 0.05
RER1-207ENST00000488353 SHBGP04278 402 aa15.35■□□□□ 0.05
RER1-207ENST00000488353 KRT18P05783 430 aaKnown RBP15.35■□□□□ 0.05
RER1-207ENST00000488353 PLA2G4BP0C869 781 aa15.35■□□□□ 0.05
RER1-207ENST00000488353 PMS2P54278 862 aa15.35■□□□□ 0.05
RER1-207ENST00000488353 COPS2P61201 443 aa15.35■□□□□ 0.05
RER1-207ENST00000488353 LACTBP83111 547 aaPredicted RBP15.35■□□□□ 0.05
RER1-207ENST00000488353 ATP11AP98196 1134 aa15.35■□□□□ 0.05
RER1-207ENST00000488353 C6orf118Q5T5N4 469 aa15.35■□□□□ 0.05
RER1-207ENST00000488353 ERICH1Q86X53 443 aa15.35■□□□□ 0.05
RER1-207ENST00000488353 DNAAF5Q86Y56 855 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms