RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 APBB2Q92870 758 aa17.43■□□□□ 0.38
C9orf3-219ENST00000488186 FDXACB1Q9BRP7 624 aaPredicted RBP17.43■□□□□ 0.38
C9orf3-219ENST00000488186 RUSC1Q9BVN2 902 aa17.43■□□□□ 0.38
C9orf3-219ENST00000488186 CUEDC2Q9H467 287 aa17.43■□□□□ 0.38
C9orf3-219ENST00000488186 POLD4Q9HCU8 107 aa17.43■□□□□ 0.38
C9orf3-219ENST00000488186 BLOC1S4Q9NUP1 217 aa17.43■□□□□ 0.38
C9orf3-219ENST00000488186 KCNG1Q9UIX4 513 aa17.43■□□□□ 0.38
C9orf3-219ENST00000488186 SCN5AQ14524 2016 aa17.42■□□□□ 0.38
C9orf3-219ENST00000488186 A0A1W2PQ27 194 aa17.42■□□□□ 0.38
C9orf3-219ENST00000488186 A0A1W2PQ64 194 aa17.42■□□□□ 0.38
C9orf3-219ENST00000488186 A0A1W2PQD8 194 aa17.42■□□□□ 0.38
C9orf3-219ENST00000488186 LRRIQ4A6NIV6 560 aa17.42■□□□□ 0.38
C9orf3-219ENST00000488186 EIF4BP23588 611 aaKnown RBP17.42■□□□□ 0.38
C9orf3-219ENST00000488186 GUCY2CP25092 1073 aa17.42■□□□□ 0.38
C9orf3-219ENST00000488186 CD52P31358 61 aa17.42■□□□□ 0.38
C9orf3-219ENST00000488186 PHKA2P46019 1235 aa17.42■□□□□ 0.38
C9orf3-219ENST00000488186 EPHB4P54760 987 aa17.42■□□□□ 0.38
C9orf3-219ENST00000488186 MBTPS1Q14703 1052 aa17.42■□□□□ 0.38
C9orf3-219ENST00000488186 OTOP2Q7RTS6 562 aa17.42■□□□□ 0.38
C9orf3-219ENST00000488186 ZBTB8OSQ8IWT0 167 aa17.42■□□□□ 0.38
C9orf3-219ENST00000488186 DBF4BQ8NFT6 615 aa17.42■□□□□ 0.38
C9orf3-219ENST00000488186 ASAP3Q8TDY4 903 aa17.42■□□□□ 0.38
C9orf3-219ENST00000488186 HERVK_113Q902F9 699 aa17.42■□□□□ 0.38
C9orf3-219ENST00000488186 MRPS27Q92552 414 aaKnown RBP17.42■□□□□ 0.38
C9orf3-219ENST00000488186 VWCEQ96DN2 955 aa17.42■□□□□ 0.38
C9orf3-219ENST00000488186 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.42■□□□□ 0.38
C9orf3-219ENST00000488186 ZHX3Q9H4I2 956 aa17.42■□□□□ 0.38
C9orf3-219ENST00000488186 NOC2LQ9Y3T9 749 aaKnown RBP17.42■□□□□ 0.38
C9orf3-219ENST00000488186 TCHHQ07283 1943 aa17.41■□□□□ 0.38
C9orf3-219ENST00000488186 A0A087X0B3 334 aa17.41■□□□□ 0.38
C9orf3-219ENST00000488186 CCDC169A6NNP5 214 aa17.41■□□□□ 0.38
C9orf3-219ENST00000488186 EFCAB14O75071 495 aa17.41■□□□□ 0.38
C9orf3-219ENST00000488186 TBCAO75347 108 aaKnown RBP17.41■□□□□ 0.38
C9orf3-219ENST00000488186 DARSP14868 501 aaKnown RBP17.41■□□□□ 0.38
C9orf3-219ENST00000488186 PFKFB1P16118 471 aa17.41■□□□□ 0.38
C9orf3-219ENST00000488186 SFPQP23246 707 aaKnown RBP eCLIP17.41■□□□□ 0.38
C9orf3-219ENST00000488186 GLRA2P23416 452 aa17.41■□□□□ 0.38
C9orf3-219ENST00000488186 NCBP1Q09161 790 aaKnown RBP17.41■□□□□ 0.38
C9orf3-219ENST00000488186 GPNMBQ14956 572 aa17.41■□□□□ 0.38
C9orf3-219ENST00000488186 SHHQ15465 462 aa17.41■□□□□ 0.38
C9orf3-219ENST00000488186 PLEKHG4Q58EX7 1191 aa17.41■□□□□ 0.38
C9orf3-219ENST00000488186 SRGAP1Q7Z6B7 1085 aa17.41■□□□□ 0.38
C9orf3-219ENST00000488186 DEPTORQ8TB45 409 aa17.41■□□□□ 0.38
C9orf3-219ENST00000488186 RNPC3Q96LT9 517 aaKnown RBP17.41■□□□□ 0.38
C9orf3-219ENST00000488186 PADI3Q9ULW8 664 aa17.41■□□□□ 0.38
C9orf3-219ENST00000488186 ST3GAL5Q9UNP4 418 aa17.41■□□□□ 0.38
C9orf3-219ENST00000488186 LOXHD1Q8IVV2 1947 aa17.41■□□□□ 0.38
C9orf3-219ENST00000488186 LAMA2P24043 3122 aaKnown RBP17.41■□□□□ 0.38
C9orf3-219ENST00000488186 NPHP3-ACAD11A0A0J9YXS1 232 aa17.4■□□□□ 0.38
C9orf3-219ENST00000488186 ABHD14A-ACY1A0A1B0GW23 586 aa17.4■□□□□ 0.38
C9orf3-219ENST00000488186 SFI1A8K8P3 1242 aa17.4■□□□□ 0.38
C9orf3-219ENST00000488186 INO80B-WBP1J3KQ70 363 aa17.4■□□□□ 0.38
C9orf3-219ENST00000488186 CSDE1O75534 798 aaKnown RBP17.4■□□□□ 0.38
C9orf3-219ENST00000488186 FAM13AO94988 1023 aa17.4■□□□□ 0.38
C9orf3-219ENST00000488186 SYKP43405 635 aa17.4■□□□□ 0.38
C9orf3-219ENST00000488186 KCNJ6P48051 423 aa17.4■□□□□ 0.38
C9orf3-219ENST00000488186 SMTNP53814 917 aa17.4■□□□□ 0.38
C9orf3-219ENST00000488186 POU5F1BQ06416 359 aa17.4■□□□□ 0.38
C9orf3-219ENST00000488186 DMP1Q13316 513 aaPredicted RBP17.4■□□□□ 0.38
C9orf3-219ENST00000488186 NAALADL2Q58DX5 795 aa17.4■□□□□ 0.38
C9orf3-219ENST00000488186 DYMQ7RTS9 669 aa17.4■□□□□ 0.38
C9orf3-219ENST00000488186 CATSPER4Q7RTX7 472 aa17.4■□□□□ 0.38
C9orf3-219ENST00000488186 CCDC34Q96HJ3 373 aa17.4■□□□□ 0.38
C9orf3-219ENST00000488186 GBP4Q96PP9 640 aa17.4■□□□□ 0.38
C9orf3-219ENST00000488186 FTHL17Q9BXU8 183 aa17.4■□□□□ 0.38
C9orf3-219ENST00000488186 C2orf40Q9H1Z8 148 aa17.4■□□□□ 0.38
C9orf3-219ENST00000488186 AGO3Q9H9G7 860 aaKnown RBP17.4■□□□□ 0.38
C9orf3-219ENST00000488186 C17orf75Q9HAS0 396 aa17.4■□□□□ 0.38
C9orf3-219ENST00000488186 MAGEF1Q9HAY2 307 aa17.4■□□□□ 0.38
C9orf3-219ENST00000488186 LARSQ9P2J5 1176 aaKnown RBP17.4■□□□□ 0.38
C9orf3-219ENST00000488186 ODF2LQ9ULJ1 636 aa17.4■□□□□ 0.38
C9orf3-219ENST00000488186 ARID2Q68CP9 1835 aa17.4■□□□□ 0.38
C9orf3-219ENST00000488186 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.39■□□□□ 0.37
C9orf3-219ENST00000488186 DENND3A2RUS2 1198 aa17.39■□□□□ 0.37
C9orf3-219ENST00000488186 BAIAP3O94812 1187 aa17.39■□□□□ 0.37
C9orf3-219ENST00000488186 ZSCAN20P17040 1043 aaPredicted RBP17.39■□□□□ 0.37
C9orf3-219ENST00000488186 NAMPTP43490 491 aa17.39■□□□□ 0.37
C9orf3-219ENST00000488186 PEX3P56589 373 aa17.39■□□□□ 0.37
C9orf3-219ENST00000488186 CACNB1Q02641 598 aaPredicted RBP17.39■□□□□ 0.37
C9orf3-219ENST00000488186 CAPSQ13938 189 aa17.39■□□□□ 0.37
C9orf3-219ENST00000488186 ARSHQ5FYA8 562 aa17.39■□□□□ 0.37
C9orf3-219ENST00000488186 C9orf50Q5SZB4 431 aa17.39■□□□□ 0.37
C9orf3-219ENST00000488186 MYCT1Q8N699 235 aa17.39■□□□□ 0.37
C9orf3-219ENST00000488186 LRRC15Q8TF66 581 aa17.39■□□□□ 0.37
C9orf3-219ENST00000488186 TMEM40Q8WWA1 233 aa17.39■□□□□ 0.37
C9orf3-219ENST00000488186 OSBPL7Q9BZF2 842 aa17.39■□□□□ 0.37
C9orf3-219ENST00000488186 TNMDQ9H2S6 317 aa17.39■□□□□ 0.37
C9orf3-219ENST00000488186 USP25Q9UHP3 1055 aa17.39■□□□□ 0.37
C9orf3-219ENST00000488186 SLC4A7Q9Y6M7 1214 aa17.39■□□□□ 0.37
C9orf3-219ENST00000488186 ERLIN2O94905 339 aa17.38■□□□□ 0.37
C9orf3-219ENST00000488186 PLS3P13797 630 aa17.38■□□□□ 0.37
C9orf3-219ENST00000488186 IDEP14735 1019 aa17.38■□□□□ 0.37
C9orf3-219ENST00000488186 LIG1P18858 919 aa17.38■□□□□ 0.37
C9orf3-219ENST00000488186 FGFR4P22455 802 aa17.38■□□□□ 0.37
C9orf3-219ENST00000488186 NDUFA8P51970 172 aa17.38■□□□□ 0.37
C9orf3-219ENST00000488186 PTENP60484 403 aa17.38■□□□□ 0.37
C9orf3-219ENST00000488186 SMAD3P84022 425 aaKnown RBP17.38■□□□□ 0.37
C9orf3-219ENST00000488186 GIT2Q14161 759 aa17.38■□□□□ 0.37
C9orf3-219ENST00000488186 E2F4Q16254 413 aa17.38■□□□□ 0.37
C9orf3-219ENST00000488186 TMEM132AQ24JP5 1023 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms