RNA–Protein interactions for RNA: ENST00000487645.1

COL4A6-207, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 3

Gene COL4A6, Length 812 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-207ENST00000487645 LBHD1Q9BQE6 289 aaPredicted RBP14.74□□□□□ -0.05
COL4A6-207ENST00000487645 REEP2Q9BRK0 252 aa14.74□□□□□ -0.05
COL4A6-207ENST00000487645 NFKBIZQ9BYH8 718 aa14.74□□□□□ -0.05
COL4A6-207ENST00000487645 GCOM2Q9BZD3 368 aaPredicted RBP14.74□□□□□ -0.05
COL4A6-207ENST00000487645 INO80BQ9C086 356 aaPredicted RBP14.74□□□□□ -0.05
COL4A6-207ENST00000487645 CDHR5Q9HBB8 845 aa14.74□□□□□ -0.05
COL4A6-207ENST00000487645 GPRC5CQ9NQ84 441 aa14.74□□□□□ -0.05
COL4A6-207ENST00000487645 ZMYND8Q9ULU4 1186 aaPredicted RBP14.74□□□□□ -0.05
COL4A6-207ENST00000487645 A0A087WZ62 844 aa14.73□□□□□ -0.05
COL4A6-207ENST00000487645 NPHP3-ACAD11A0A0J9YXS1 232 aa14.73□□□□□ -0.05
COL4A6-207ENST00000487645 CTSHP09668 335 aa14.73□□□□□ -0.05
COL4A6-207ENST00000487645 SYN1P17600 705 aa14.73□□□□□ -0.05
COL4A6-207ENST00000487645 NAMPTP43490 491 aa14.73□□□□□ -0.05
COL4A6-207ENST00000487645 ZNF131P52739 623 aa14.73□□□□□ -0.05
COL4A6-207ENST00000487645 RAD51AP2Q09MP3 1159 aa14.73□□□□□ -0.05
COL4A6-207ENST00000487645 GPNMBQ14956 572 aa14.73□□□□□ -0.05
COL4A6-207ENST00000487645 FBXO47Q5MNV8 452 aa14.73□□□□□ -0.05
COL4A6-207ENST00000487645 ODR4Q5SWX8 454 aa14.73□□□□□ -0.05
COL4A6-207ENST00000487645 SRGAP1Q7Z6B7 1085 aa14.73□□□□□ -0.05
COL4A6-207ENST00000487645 ELOA2Q8IYF1 753 aaPredicted RBP14.73□□□□□ -0.05
COL4A6-207ENST00000487645 ASAP3Q8TDY4 903 aa14.73□□□□□ -0.05
COL4A6-207ENST00000487645 SCLYQ96I15 445 aa14.73□□□□□ -0.05
COL4A6-207ENST00000487645 FDXACB1Q9BRP7 624 aaPredicted RBP14.73□□□□□ -0.05
COL4A6-207ENST00000487645 TRIM9Q9C026 710 aa14.73□□□□□ -0.05
COL4A6-207ENST00000487645 IFT122Q9HBG6 1241 aa14.73□□□□□ -0.05
COL4A6-207ENST00000487645 LARSQ9P2J5 1176 aaKnown RBP14.73□□□□□ -0.05
COL4A6-207ENST00000487645 CEP290O15078 2479 aa14.73□□□□□ -0.05
COL4A6-207ENST00000487645 NBNO60934 754 aa14.72□□□□□ -0.05
COL4A6-207ENST00000487645 NR1I2O75469 434 aa14.72□□□□□ -0.05
COL4A6-207ENST00000487645 CXCL10P02778 98 aa14.72□□□□□ -0.05
COL4A6-207ENST00000487645 PFKMP08237 780 aa14.72□□□□□ -0.05
COL4A6-207ENST00000487645 PLS3P13797 630 aa14.72□□□□□ -0.05
COL4A6-207ENST00000487645 DARSP14868 501 aaKnown RBP14.72□□□□□ -0.05
COL4A6-207ENST00000487645 CSF2RAP15509 400 aa14.72□□□□□ -0.05
COL4A6-207ENST00000487645 LIG1P18858 919 aa14.72□□□□□ -0.05
COL4A6-207ENST00000487645 SCP2P22307 547 aa14.72□□□□□ -0.05
COL4A6-207ENST00000487645 AFMP43652 599 aa14.72□□□□□ -0.05
COL4A6-207ENST00000487645 PHKA2P46019 1235 aa14.72□□□□□ -0.05
COL4A6-207ENST00000487645 PTENP60484 403 aa14.72□□□□□ -0.05
COL4A6-207ENST00000487645 FPGSQ05932 587 aa14.72□□□□□ -0.05
COL4A6-207ENST00000487645 PPIGQ13427 754 aaKnown RBP eCLIP14.72□□□□□ -0.05
COL4A6-207ENST00000487645 CAPSQ13938 189 aa14.72□□□□□ -0.05
COL4A6-207ENST00000487645 MBTPS1Q14703 1052 aa14.72□□□□□ -0.05
COL4A6-207ENST00000487645 DYMQ7RTS9 669 aa14.72□□□□□ -0.05
COL4A6-207ENST00000487645 RNF149Q8NC42 400 aa14.72□□□□□ -0.05
COL4A6-207ENST00000487645 SPIRE2Q8WWL2 714 aa14.72□□□□□ -0.05
COL4A6-207ENST00000487645 STAMQ92783 540 aa14.72□□□□□ -0.05
COL4A6-207ENST00000487645 NLRP4Q96MN2 994 aa14.72□□□□□ -0.05
COL4A6-207ENST00000487645 SCLT1Q96NL6 688 aa14.72□□□□□ -0.05
COL4A6-207ENST00000487645 OSMRQ99650 979 aa14.72□□□□□ -0.05
COL4A6-207ENST00000487645 C2orf40Q9H1Z8 148 aa14.72□□□□□ -0.05
COL4A6-207ENST00000487645 PARVGQ9HBI0 331 aa14.72□□□□□ -0.05
COL4A6-207ENST00000487645 POLD4Q9HCU8 107 aa14.72□□□□□ -0.05
COL4A6-207ENST00000487645 SEL1LQ9UBV2 794 aa14.72□□□□□ -0.05
COL4A6-207ENST00000487645 GINS2Q9Y248 185 aa14.72□□□□□ -0.05
COL4A6-207ENST00000487645 PVALEFA0A1B0GWK0 134 aa14.71□□□□□ -0.05
COL4A6-207ENST00000487645 FRMD3A2A2Y4 597 aa14.71□□□□□ -0.05
COL4A6-207ENST00000487645 SFI1A8K8P3 1242 aa14.71□□□□□ -0.05
COL4A6-207ENST00000487645 H0YGN5 161 aa14.71□□□□□ -0.05
COL4A6-207ENST00000487645 GPR182O15218 404 aa14.71□□□□□ -0.05
COL4A6-207ENST00000487645 TBCAO75347 108 aaKnown RBP14.71□□□□□ -0.05
COL4A6-207ENST00000487645 FAM13AO94988 1023 aa14.71□□□□□ -0.05
COL4A6-207ENST00000487645 GAP43P17677 238 aa14.71□□□□□ -0.05
COL4A6-207ENST00000487645 NPTX2P47972 431 aa14.71□□□□□ -0.05
COL4A6-207ENST00000487645 EFNA5P52803 228 aa14.71□□□□□ -0.05
COL4A6-207ENST00000487645 SMTNP53814 917 aa14.71□□□□□ -0.05
COL4A6-207ENST00000487645 PEX3P56589 373 aa14.71□□□□□ -0.05
COL4A6-207ENST00000487645 MDM2Q00987 491 aaPredicted RBP14.71□□□□□ -0.05
COL4A6-207ENST00000487645 DMP1Q13316 513 aaPredicted RBP14.71□□□□□ -0.05
COL4A6-207ENST00000487645 LPIN1Q14693 890 aa14.71□□□□□ -0.05
COL4A6-207ENST00000487645 PCBP1Q15365 356 aaKnown RBP eCLIP14.71□□□□□ -0.05
COL4A6-207ENST00000487645 PLEKHG4Q58EX7 1191 aa14.71□□□□□ -0.05
COL4A6-207ENST00000487645 TSHZ1Q6ZSZ6 1077 aa14.71□□□□□ -0.05
COL4A6-207ENST00000487645 CCDC65Q8IXS2 484 aa14.71□□□□□ -0.05
COL4A6-207ENST00000487645 MYCT1Q8N699 235 aa14.71□□□□□ -0.05
COL4A6-207ENST00000487645 DEPTORQ8TB45 409 aa14.71□□□□□ -0.05
COL4A6-207ENST00000487645 BSNDQ8WZ55 320 aa14.71□□□□□ -0.05
COL4A6-207ENST00000487645 IL23AQ9NPF7 189 aa14.71□□□□□ -0.05
COL4A6-207ENST00000487645 HOOK1Q9UJC3 728 aaKnown RBP14.71□□□□□ -0.05
COL4A6-207ENST00000487645 PHLPP2Q6ZVD8 1323 aa14.7□□□□□ -0.06
COL4A6-207ENST00000487645 LRRIQ4A6NIV6 560 aa14.7□□□□□ -0.06
COL4A6-207ENST00000487645 CCDC169A6NNP5 214 aa14.7□□□□□ -0.06
COL4A6-207ENST00000487645 H0YCG3 227 aa14.7□□□□□ -0.06
COL4A6-207ENST00000487645 GTPBP6O43824 516 aaPredicted RBP14.7□□□□□ -0.06
COL4A6-207ENST00000487645 KINO60870 393 aaKnown RBP14.7□□□□□ -0.06
COL4A6-207ENST00000487645 RPS6KA5O75582 802 aa14.7□□□□□ -0.06
COL4A6-207ENST00000487645 MAPTP10636 758 aaKnown RBP14.7□□□□□ -0.06
COL4A6-207ENST00000487645 GHRP10912 638 aa14.7□□□□□ -0.06
COL4A6-207ENST00000487645 ABCD1P33897 745 aa14.7□□□□□ -0.06
COL4A6-207ENST00000487645 MCM4P33991 863 aa14.7□□□□□ -0.06
COL4A6-207ENST00000487645 CDCA2Q69YH5 1023 aaPredicted RBP14.7□□□□□ -0.06
COL4A6-207ENST00000487645 ZBTB8OSQ8IWT0 167 aa14.7□□□□□ -0.06
COL4A6-207ENST00000487645 SLC17A8Q8NDX2 589 aa14.7□□□□□ -0.06
COL4A6-207ENST00000487645 TMEM40Q8WWA1 233 aa14.7□□□□□ -0.06
COL4A6-207ENST00000487645 SEPT8Q92599 483 aa14.7□□□□□ -0.06
COL4A6-207ENST00000487645 APBB2Q92870 758 aa14.7□□□□□ -0.06
COL4A6-207ENST00000487645 KCNN1Q92952 543 aa14.7□□□□□ -0.06
COL4A6-207ENST00000487645 VWCEQ96DN2 955 aa14.7□□□□□ -0.06
COL4A6-207ENST00000487645 ZNF668Q96K58 619 aaPredicted RBP14.7□□□□□ -0.06
COL4A6-207ENST00000487645 PPP1R16BQ96T49 567 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms