RNA–Protein interactions for RNA: ENST00000487222.5

EPHB4-206, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 5,058 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-206ENST00000487222 FIS1Q9Y3D6 152 aa15.72■□□□□ 0.11
EPHB4-206ENST00000487222 CPDO75976 1380 aa15.72■□□□□ 0.11
EPHB4-206ENST00000487222 PLEKHG2Q9H7P9 1386 aa15.72■□□□□ 0.11
EPHB4-206ENST00000487222 A0A1B0GTH6 734 aa15.71■□□□□ 0.11
EPHB4-206ENST00000487222 ARL13BQ3SXY8 428 aa15.71■□□□□ 0.11
EPHB4-206ENST00000487222 E4F1Q66K89 784 aaPredicted RBP15.71■□□□□ 0.11
EPHB4-206ENST00000487222 RCSD1Q6JBY9 416 aa15.71■□□□□ 0.11
EPHB4-206ENST00000487222 VPS39Q96JC1 886 aa15.71■□□□□ 0.11
EPHB4-206ENST00000487222 CCDC138Q96M89 665 aa15.71■□□□□ 0.11
EPHB4-206ENST00000487222 TTC1Q99614 292 aa15.71■□□□□ 0.11
EPHB4-206ENST00000487222 UPF3AQ9H1J1 476 aaKnown RBP15.71■□□□□ 0.11
EPHB4-206ENST00000487222 STRIP2Q9ULQ0 834 aa15.71■□□□□ 0.11
EPHB4-206ENST00000487222 PFASO15067 1338 aa15.71■□□□□ 0.11
EPHB4-206ENST00000487222 ADGRB3O60242 1522 aa15.71■□□□□ 0.11
EPHB4-206ENST00000487222 USP17L10C9JJH3 530 aa15.71■□□□□ 0.11
EPHB4-206ENST00000487222 ZNF18P17022 549 aa15.71■□□□□ 0.11
EPHB4-206ENST00000487222 CRKP46108 304 aa15.71■□□□□ 0.11
EPHB4-206ENST00000487222 POLE2P56282 527 aa15.71■□□□□ 0.11
EPHB4-206ENST00000487222 CCZ1BP86790 482 aa15.71■□□□□ 0.11
EPHB4-206ENST00000487222 CCZ1P86791 482 aaPredicted RBP15.71■□□□□ 0.11
EPHB4-206ENST00000487222 IL1RL1Q01638 556 aa15.71■□□□□ 0.11
EPHB4-206ENST00000487222 MTF1Q14872 753 aa15.71■□□□□ 0.11
EPHB4-206ENST00000487222 KCNF1Q9H3M0 494 aa15.71■□□□□ 0.11
EPHB4-206ENST00000487222 INTUQ9ULD6 942 aa15.71■□□□□ 0.11
EPHB4-206ENST00000487222 CDC42BPBQ9Y5S2 1711 aa15.71■□□□□ 0.11
EPHB4-206ENST00000487222 HSPA4LO95757 839 aa15.71■□□□□ 0.11
EPHB4-206ENST00000487222 VAMP7P51809 220 aa15.71■□□□□ 0.11
EPHB4-206ENST00000487222 MDM2Q00987 491 aaPredicted RBP15.71■□□□□ 0.11
EPHB4-206ENST00000487222 ZNF211Q13398 564 aaPredicted RBP15.71■□□□□ 0.11
EPHB4-206ENST00000487222 GRAMD1BQ3KR37 738 aa15.71■□□□□ 0.11
EPHB4-206ENST00000487222 RFFLQ8WZ73 363 aa15.71■□□□□ 0.11
EPHB4-206ENST00000487222 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.71■□□□□ 0.112e-6■■■■■ 54.9
EPHB4-206ENST00000487222 AP5M1Q9H0R1 490 aa15.71■□□□□ 0.11
EPHB4-206ENST00000487222 MADDQ8WXG6 1647 aa15.71■□□□□ 0.11
EPHB4-206ENST00000487222 CLDN3O15551 220 aa15.71■□□□□ 0.1
EPHB4-206ENST00000487222 SPAG7O75391 227 aa15.71■□□□□ 0.1
EPHB4-206ENST00000487222 BRAFP15056 766 aa15.71■□□□□ 0.1
EPHB4-206ENST00000487222 CDO1Q16878 200 aa15.71■□□□□ 0.1
EPHB4-206ENST00000487222 RABL6Q3YEC7 729 aaPredicted RBP15.71■□□□□ 0.1
EPHB4-206ENST00000487222 NBPF10Q6P3W6 841 aaKnown RBP15.71■□□□□ 0.1
EPHB4-206ENST00000487222 ST13P4Q8IZP2 240 aaPredicted RBP15.71■□□□□ 0.1
EPHB4-206ENST00000487222 C11orf70Q9BRQ4 267 aa15.71■□□□□ 0.1
EPHB4-206ENST00000487222 NUP85Q9BW27 656 aa15.71■□□□□ 0.1
EPHB4-206ENST00000487222 INTS2Q9H0H0 1204 aaKnown RBP15.71■□□□□ 0.1
EPHB4-206ENST00000487222 NRKQ7Z2Y5 1582 aa15.71■□□□□ 0.1
EPHB4-206ENST00000487222 NBPF26B4DH59 902 aa15.7■□□□□ 0.1
EPHB4-206ENST00000487222 FTLP02792 175 aaPredicted RBP15.7■□□□□ 0.1
EPHB4-206ENST00000487222 VSNL1P62760 191 aa15.7■□□□□ 0.1
EPHB4-206ENST00000487222 FOXO4P98177 505 aa15.7■□□□□ 0.1
EPHB4-206ENST00000487222 KRT76Q01546 638 aa15.7■□□□□ 0.1
EPHB4-206ENST00000487222 TAF1BQ53T94 588 aaPredicted RBP15.7■□□□□ 0.1
EPHB4-206ENST00000487222 DALRD3Q5D0E6 543 aaKnown RBP15.7■□□□□ 0.1
EPHB4-206ENST00000487222 KLC3Q6P597 504 aa15.7■□□□□ 0.1
EPHB4-206ENST00000487222 EEPD1Q7L9B9 569 aa15.7■□□□□ 0.1
EPHB4-206ENST00000487222 THNSL1Q8IYQ7 743 aa15.7■□□□□ 0.1
EPHB4-206ENST00000487222 NBPF15Q8N660 670 aa15.7■□□□□ 0.1
EPHB4-206ENST00000487222 DHX38Q92620 1227 aaKnown RBP15.7■□□□□ 0.1
EPHB4-206ENST00000487222 DYDC2Q96IM9 177 aa15.7■□□□□ 0.1
EPHB4-206ENST00000487222 NLRP4Q96MN2 994 aa15.7■□□□□ 0.1
EPHB4-206ENST00000487222 ZNF341Q9BYN7 854 aa15.7■□□□□ 0.1
EPHB4-206ENST00000487222 WNT8AQ9H1J5 351 aa15.7■□□□□ 0.1
EPHB4-206ENST00000487222 STOML1Q9UBI4 398 aa15.7■□□□□ 0.1
EPHB4-206ENST00000487222 NOC2LQ9Y3T9 749 aaKnown RBP15.7■□□□□ 0.1
EPHB4-206ENST00000487222 OVOS2A0A0G2JMS6 1433 aa15.7■□□□□ 0.1
EPHB4-206ENST00000487222 OVOS2A0A0J9YW53 1432 aa15.7■□□□□ 0.1
EPHB4-206ENST00000487222 OVOS2Q6IE36 1432 aa15.7■□□□□ 0.1
EPHB4-206ENST00000487222 DEUP1Q05D60 604 aa15.7■□□□□ 0.1
EPHB4-206ENST00000487222 CCSER1Q9C0I3 900 aa15.7■□□□□ 0.1
EPHB4-206ENST00000487222 POTEFA5A3E0 1075 aa15.7■□□□□ 0.1
EPHB4-206ENST00000487222 POTEIP0CG38 1075 aa15.7■□□□□ 0.1
EPHB4-206ENST00000487222 PPP6R3Q5H9R7 873 aaPredicted RBP15.7■□□□□ 0.1
EPHB4-206ENST00000487222 RC3H1Q5TC82 1133 aaKnown RBP15.7■□□□□ 0.1
EPHB4-206ENST00000487222 POTEGQ6S5H5 508 aa15.7■□□□□ 0.1
EPHB4-206ENST00000487222 POTEEQ6S8J3 1075 aa15.7■□□□□ 0.1
EPHB4-206ENST00000487222 TMEM270Q6UE05 265 aa15.7■□□□□ 0.1
EPHB4-206ENST00000487222 ABI1Q8IZP0 508 aa15.7■□□□□ 0.1
EPHB4-206ENST00000487222 THOC1Q96FV9 657 aaKnown RBP15.7■□□□□ 0.1
EPHB4-206ENST00000487222 ASNSD1Q9NWL6 643 aa15.7■□□□□ 0.1
EPHB4-206ENST00000487222 SNX12Q9UMY4 172 aa15.7■□□□□ 0.1
EPHB4-206ENST00000487222 APOBEC2Q9Y235 224 aaKnown RBP15.7■□□□□ 0.1
EPHB4-206ENST00000487222 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.7■□□□□ 0.1
EPHB4-206ENST00000487222 MROH7-TTC4A0A0A0MT08 1334 aa15.7■□□□□ 0.1
EPHB4-206ENST00000487222 GGPS1O95749 300 aa15.7■□□□□ 0.1
EPHB4-206ENST00000487222 APOEP02649 317 aa15.7■□□□□ 0.1
EPHB4-206ENST00000487222 ZNF394Q53GI3 561 aa15.7■□□□□ 0.1
EPHB4-206ENST00000487222 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.7■□□□□ 0.1
EPHB4-206ENST00000487222 CHMP6Q96FZ7 201 aa15.7■□□□□ 0.1
EPHB4-206ENST00000487222 RMDN3Q96TC7 470 aa15.7■□□□□ 0.1
EPHB4-206ENST00000487222 ATP8B3O60423 1300 aa15.7■□□□□ 0.1
EPHB4-206ENST00000487222 SETBP1Q9Y6X0 1596 aa15.7■□□□□ 0.1
EPHB4-206ENST00000487222 CROCC2H7BZ55 1655 aa15.69■□□□□ 0.1
EPHB4-206ENST00000487222 DHX34Q14147 1143 aaKnown RBP15.69■□□□□ 0.1
EPHB4-206ENST00000487222 ZFP69BQ9UJL9 534 aa15.69■□□□□ 0.1
EPHB4-206ENST00000487222 TRIM59Q8IWR1 403 aa15.69■□□□□ 0.1
EPHB4-206ENST00000487222 NEDD1Q8NHV4 660 aa15.69■□□□□ 0.1
EPHB4-206ENST00000487222 FAM167AQ96KS9 214 aa15.69■□□□□ 0.1
EPHB4-206ENST00000487222 LRRC37BQ96QE4 947 aa15.69■□□□□ 0.1
EPHB4-206ENST00000487222 MYO3BQ8WXR4 1341 aa15.69■□□□□ 0.1
EPHB4-206ENST00000487222 P4HBP07237 508 aaKnown RBP15.69■□□□□ 0.1
EPHB4-206ENST00000487222 FCER1AP12319 257 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms