RNA–Protein interactions for RNA: ENST00000487091.1

CLIP2-206, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 989 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-206ENST00000487091 POLGP54098 1239 aaPredicted RBP21.35■■□□□ 1.01
CLIP2-206ENST00000487091 PTCRAQ6ISU1 281 aaPredicted RBP21.35■■□□□ 1.01
CLIP2-206ENST00000487091 ZNF598Q86UK7 904 aaKnown RBP21.35■■□□□ 1.01
CLIP2-206ENST00000487091 CCDC83Q8IWF9 413 aa21.35■■□□□ 1.01
CLIP2-206ENST00000487091 ZNF579Q8NAF0 562 aaKnown RBP21.35■■□□□ 1.01
CLIP2-206ENST00000487091 KIF2CQ99661 725 aa21.35■■□□□ 1.01
CLIP2-206ENST00000487091 TRAIPQ9BWF2 469 aa21.35■■□□□ 1.01
CLIP2-206ENST00000487091 SH2B1Q9NRF2 756 aaPredicted RBP21.35■■□□□ 1.01
CLIP2-206ENST00000487091 CLDND1Q9NY35 253 aa21.35■■□□□ 1.01
CLIP2-206ENST00000487091 GRXCR2A6NFK2 248 aa21.34■■□□□ 1.01
CLIP2-206ENST00000487091 CSDE1O75534 798 aaKnown RBP21.34■■□□□ 1.01
CLIP2-206ENST00000487091 SLITRK3O94933 977 aa21.34■■□□□ 1.01
CLIP2-206ENST00000487091 CTTNQ14247 550 aaKnown RBP21.34■■□□□ 1.01
CLIP2-206ENST00000487091 ABI1Q8IZP0 508 aa21.34■■□□□ 1.01
CLIP2-206ENST00000487091 COLGALT1Q8NBJ5 622 aa21.34■■□□□ 1.01
CLIP2-206ENST00000487091 PSPC1Q8WXF1 523 aaKnown RBP21.34■■□□□ 1.01
CLIP2-206ENST00000487091 C8orf76Q96K31 380 aa21.34■■□□□ 1.01
CLIP2-206ENST00000487091 MTMR9Q96QG7 549 aa21.34■■□□□ 1.01
CLIP2-206ENST00000487091 HSD17B14Q9BPX1 270 aa21.34■■□□□ 1.01
CLIP2-206ENST00000487091 EIF2AK1Q9BQI3 630 aaKnown RBP21.34■■□□□ 1.01
CLIP2-206ENST00000487091 TTC12Q9H892 705 aaPredicted RBP21.34■■□□□ 1.01
CLIP2-206ENST00000487091 COL4A3BPQ9Y5P4 624 aa21.34■■□□□ 1.01
CLIP2-206ENST00000487091 PLXNA4Q9HCM2 1894 aa21.33■■□□□ 1.01
CLIP2-206ENST00000487091 H3BQ06 376 aaPredicted RBP21.33■■□□□ 1.01
CLIP2-206ENST00000487091 WNT7AO00755 349 aa21.33■■□□□ 1.01
CLIP2-206ENST00000487091 ASAP2O43150 1006 aa21.33■■□□□ 1.01
CLIP2-206ENST00000487091 LYPLA2O95372 231 aa21.33■■□□□ 1.01
CLIP2-206ENST00000487091 LTBRP36941 435 aa21.33■■□□□ 1.01
CLIP2-206ENST00000487091 HMGN5P82970 282 aaKnown RBP21.33■■□□□ 1.01
CLIP2-206ENST00000487091 CYP4A11Q02928 519 aa21.33■■□□□ 1.01
CLIP2-206ENST00000487091 EP400NLQ6ZTU2 488 aa21.33■■□□□ 1.01
CLIP2-206ENST00000487091 KSR1Q8IVT5 923 aa21.33■■□□□ 1.01
CLIP2-206ENST00000487091 TPH2Q8IWU9 490 aa21.33■■□□□ 1.01
CLIP2-206ENST00000487091 TCP11Q8WWU5 503 aa21.33■■□□□ 1.01
CLIP2-206ENST00000487091 RSPH1Q8WYR4 309 aa21.33■■□□□ 1.01
CLIP2-206ENST00000487091 NLRP4Q96MN2 994 aa21.33■■□□□ 1.01
CLIP2-206ENST00000487091 IFT122Q9HBG6 1241 aa21.33■■□□□ 1.01
CLIP2-206ENST00000487091 FGF18O76093 207 aa21.32■■□□□ 1
CLIP2-206ENST00000487091 SKIP12755 728 aa21.32■■□□□ 1
CLIP2-206ENST00000487091 ATF7P17544 494 aaPredicted RBP21.32■■□□□ 1
CLIP2-206ENST00000487091 IRS1P35568 1242 aa21.32■■□□□ 1
CLIP2-206ENST00000487091 TXKP42681 527 aa21.32■■□□□ 1
CLIP2-206ENST00000487091 RBM25P49756 843 aaKnown RBP21.32■■□□□ 1
CLIP2-206ENST00000487091 GUCY1B3Q02153 619 aa21.32■■□□□ 1
CLIP2-206ENST00000487091 XKR9Q5GH70 373 aa21.32■■□□□ 1
CLIP2-206ENST00000487091 LRRC55Q6ZSA7 311 aa21.32■■□□□ 1
CLIP2-206ENST00000487091 FAM178BQ8IXR5 827 aa21.32■■□□□ 1
CLIP2-206ENST00000487091 THNSL1Q8IYQ7 743 aa21.32■■□□□ 1
CLIP2-206ENST00000487091 LRRC43Q8N309 656 aa21.32■■□□□ 1
CLIP2-206ENST00000487091 PRPF31Q8WWY3 499 aaKnown RBP21.32■■□□□ 1
CLIP2-206ENST00000487091 TMEM143Q96AN5 459 aa21.32■■□□□ 1
CLIP2-206ENST00000487091 FOXP1Q9H334 677 aaPredicted RBP21.32■■□□□ 1
CLIP2-206ENST00000487091 HCSTQ9UBK5 93 aa21.32■■□□□ 1
CLIP2-206ENST00000487091 FAM50BQ9Y247 325 aa21.32■■□□□ 1
CLIP2-206ENST00000487091 LZTS1Q9Y250 596 aa21.32■■□□□ 1
CLIP2-206ENST00000487091 IL9P15248 144 aa21.31■■□□□ 1
CLIP2-206ENST00000487091 PHKA2P46019 1235 aa21.31■■□□□ 1
CLIP2-206ENST00000487091 PLCB3Q01970 1234 aa21.31■■□□□ 1
CLIP2-206ENST00000487091 ADAM15Q13444 863 aa21.31■■□□□ 1
CLIP2-206ENST00000487091 EMC2Q15006 297 aa21.31■■□□□ 1
CLIP2-206ENST00000487091 CLLU1OSQ5K130 101 aa21.31■■□□□ 1
CLIP2-206ENST00000487091 TWF2Q6IBS0 349 aaKnown RBP21.31■■□□□ 1
CLIP2-206ENST00000487091 PDE12Q6L8Q7 609 aaKnown RBP21.31■■□□□ 1
CLIP2-206ENST00000487091 CATSPER4Q7RTX7 472 aa21.31■■□□□ 1
CLIP2-206ENST00000487091 SRGAP1Q7Z6B7 1085 aa21.31■■□□□ 1
CLIP2-206ENST00000487091 RNF169Q8NCN4 708 aa21.31■■□□□ 1
CLIP2-206ENST00000487091 FBXO18Q8NFZ0 1043 aa21.31■■□□□ 1
CLIP2-206ENST00000487091 IGFLR1Q9H665 355 aa21.31■■□□□ 1
CLIP2-206ENST00000487091 ANKEF1Q9NU02 776 aa21.31■■□□□ 1
CLIP2-206ENST00000487091 ARID2Q68CP9 1835 aa21.3■■□□□ 1
CLIP2-206ENST00000487091 ZBTB39O15060 712 aa21.3■■□□□ 1
CLIP2-206ENST00000487091 ZNF623O75123 536 aa21.3■■□□□ 1
CLIP2-206ENST00000487091 CSPG5O95196 566 aa21.3■■□□□ 1
CLIP2-206ENST00000487091 GTF2F1P35269 517 aaKnown RBP eCLIP21.3■■□□□ 1
CLIP2-206ENST00000487091 LAMTOR4Q0VGL1 99 aa21.3■■□□□ 1
CLIP2-206ENST00000487091 ORC2Q13416 577 aaPredicted RBP21.3■■□□□ 1
CLIP2-206ENST00000487091 KCNT2Q6UVM3 1135 aa21.3■■□□□ 1
CLIP2-206ENST00000487091 MTRQ99707 1265 aa21.3■■□□□ 1
CLIP2-206ENST00000487091 MRPL9Q9BYD2 267 aaKnown RBP21.3■■□□□ 1
CLIP2-206ENST00000487091 TMEM60Q9H2L4 133 aa21.3■■□□□ 1
CLIP2-206ENST00000487091 TLR9Q9NR96 1032 aa21.3■■□□□ 1
CLIP2-206ENST00000487091 PIN4Q9Y237 131 aaKnown RBP21.3■■□□□ 1
CLIP2-206ENST00000487091 SRGAP2CP0DJJ0 459 aa21.29■■□□□ 1
CLIP2-206ENST00000487091 XRCC6P12956 609 aaKnown RBP eCLIP21.29■■□□□ 1
CLIP2-206ENST00000487091 PPM1AP35813 382 aa21.29■■□□□ 1
CLIP2-206ENST00000487091 RAB27AP51159 221 aa21.29■■□□□ 1
CLIP2-206ENST00000487091 ADGRD2Q7Z7M1 963 aa21.29■■□□□ 1
CLIP2-206ENST00000487091 FERMT3Q86UX7 667 aa21.29■■□□□ 1
CLIP2-206ENST00000487091 EFHBQ8N7U6 833 aa21.29■■□□□ 1
CLIP2-206ENST00000487091 FAM184AQ8NB25 1140 aa21.29■■□□□ 1
CLIP2-206ENST00000487091 HELQQ8TDG4 1101 aa21.29■■□□□ 1
CLIP2-206ENST00000487091 MRPS27Q92552 414 aaKnown RBP21.29■■□□□ 1
CLIP2-206ENST00000487091 ZNF558Q96NG5 402 aa21.29■■□□□ 1
CLIP2-206ENST00000487091 AGPAT5Q9NUQ2 364 aa21.29■■□□□ 1
CLIP2-206ENST00000487091 FAM105AQ9NUU6 356 aa21.29■■□□□ 1
CLIP2-206ENST00000487091 PUF60Q9UHX1 559 aaKnown RBP21.29■■□□□ 1
CLIP2-206ENST00000487091 DGAT1O75907 488 aa21.28■■□□□ 1
CLIP2-206ENST00000487091 ATP2B1P20020 1258 aa21.28■■□□□ 1
CLIP2-206ENST00000487091 MCM7P33993 719 aa21.28■■□□□ 1
CLIP2-206ENST00000487091 DLX2Q07687 328 aaPredicted RBP21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms