RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 DOK7Q18PE1 504 aa13.38□□□□□ -0.27
HSPG2-211ENST00000486901 QRICH1Q2TAL8 776 aa13.38□□□□□ -0.27
HSPG2-211ENST00000486901 LLGL2Q6P1M3 1020 aa13.38□□□□□ -0.27
HSPG2-211ENST00000486901 IQCDQ96DY2 449 aa13.38□□□□□ -0.27
HSPG2-211ENST00000486901 CEP63Q96MT8 703 aa13.38□□□□□ -0.27
HSPG2-211ENST00000486901 ACTR5Q9H9F9 607 aaPredicted RBP13.38□□□□□ -0.27
HSPG2-211ENST00000486901 SIX2Q9NPC8 291 aa13.38□□□□□ -0.27
HSPG2-211ENST00000486901 ALG6Q9Y672 507 aa13.38□□□□□ -0.27
HSPG2-211ENST00000486901 MTMR3Q13615 1198 aa13.38□□□□□ -0.27
HSPG2-211ENST00000486901 IFI16Q16666 785 aaKnown RBP13.38□□□□□ -0.27
HSPG2-211ENST00000486901 FAM186BQ8IYM0 893 aa13.38□□□□□ -0.27
HSPG2-211ENST00000486901 SLC30A5Q8TAD4 765 aa13.38□□□□□ -0.27
HSPG2-211ENST00000486901 ADAM7Q9H2U9 754 aa13.38□□□□□ -0.27
HSPG2-211ENST00000486901 RIOX1Q9H6W3 641 aa13.38□□□□□ -0.27
HSPG2-211ENST00000486901 ARHGEF10LQ9HCE6 1279 aa13.38□□□□□ -0.27
HSPG2-211ENST00000486901 EML1O00423 815 aa13.38□□□□□ -0.27
HSPG2-211ENST00000486901 GDF11O95390 407 aa13.38□□□□□ -0.27
HSPG2-211ENST00000486901 ALDH5A1P51649 535 aaPredicted RBP13.38□□□□□ -0.27
HSPG2-211ENST00000486901 DLG4P78352 724 aa13.38□□□□□ -0.27
HSPG2-211ENST00000486901 KIAA1755Q5JYT7 1200 aa13.38□□□□□ -0.27
HSPG2-211ENST00000486901 KIAA0825Q8IV33 1275 aa13.38□□□□□ -0.27
HSPG2-211ENST00000486901 ANO3Q9BYT9 981 aa13.38□□□□□ -0.27
HSPG2-211ENST00000486901 ECT2Q9H8V3 914 aa13.38□□□□□ -0.27
HSPG2-211ENST00000486901 ZNF287Q9HBT7 754 aa13.38□□□□□ -0.27
HSPG2-211ENST00000486901 CD209Q9NNX6 404 aa13.38□□□□□ -0.27
HSPG2-211ENST00000486901 GOLGA8IPA6NC78 632 aa13.37□□□□□ -0.27
HSPG2-211ENST00000486901 GOLGA8JA6NMD2 632 aa13.37□□□□□ -0.27
HSPG2-211ENST00000486901 FAM86B1E9PN63 330 aa13.37□□□□□ -0.27
HSPG2-211ENST00000486901 FAM86B2P0C5J1 330 aa13.37□□□□□ -0.27
HSPG2-211ENST00000486901 RBM26Q5T8P6 1007 aaKnown RBP13.37□□□□□ -0.27
HSPG2-211ENST00000486901 TRPM8Q7Z2W7 1104 aa13.37□□□□□ -0.27
HSPG2-211ENST00000486901 RUBCNQ92622 972 aa13.37□□□□□ -0.27
HSPG2-211ENST00000486901 MYH14Q7Z406 1995 aaKnown RBP13.37□□□□□ -0.27
HSPG2-211ENST00000486901 PNMA6FA0A0J9YX94 578 aa13.37□□□□□ -0.27
HSPG2-211ENST00000486901 GOLGA6L10A0A0M3HER8 536 aa13.37□□□□□ -0.27
HSPG2-211ENST00000486901 RASGRF2O14827 1237 aa13.37□□□□□ -0.27
HSPG2-211ENST00000486901 FTLP02792 175 aaPredicted RBP13.37□□□□□ -0.27
HSPG2-211ENST00000486901 SLC12A3P55017 1021 aa13.37□□□□□ -0.27
HSPG2-211ENST00000486901 CCDC137Q6PK04 289 aaKnown RBP13.37□□□□□ -0.27
HSPG2-211ENST00000486901 ERICH1Q86X53 443 aa13.37□□□□□ -0.27
HSPG2-211ENST00000486901 SYN2Q92777 582 aaPredicted RBP13.37□□□□□ -0.27
HSPG2-211ENST00000486901 KLHL29Q96CT2 875 aa13.37□□□□□ -0.27
HSPG2-211ENST00000486901 HEMGNQ9BXL5 484 aa13.37□□□□□ -0.27
HSPG2-211ENST00000486901 EDEM3Q9BZQ6 932 aa13.37□□□□□ -0.27
HSPG2-211ENST00000486901 UBE2TQ9NPD8 197 aaPredicted RBP13.37□□□□□ -0.27
HSPG2-211ENST00000486901 SNED1Q8TER0 1413 aa13.37□□□□□ -0.27
HSPG2-211ENST00000486901 ASTN1O14525 1302 aa13.37□□□□□ -0.27
HSPG2-211ENST00000486901 LDHCP07864 332 aa13.37□□□□□ -0.27
HSPG2-211ENST00000486901 GCLMP48507 274 aa13.37□□□□□ -0.27
HSPG2-211ENST00000486901 NFIAQ12857 509 aa13.37□□□□□ -0.27
HSPG2-211ENST00000486901 ZDHHC24Q6UX98 284 aa13.37□□□□□ -0.27
HSPG2-211ENST00000486901 TEX2Q8IWB9 1127 aa13.37□□□□□ -0.27
HSPG2-211ENST00000486901 SYCP3Q8IZU3 236 aa13.37□□□□□ -0.27
HSPG2-211ENST00000486901 LMBR1Q8WVP7 490 aa13.37□□□□□ -0.27
HSPG2-211ENST00000486901 SPDL1Q96EA4 605 aa13.37□□□□□ -0.27
HSPG2-211ENST00000486901 FAM114A2Q9NRY5 505 aa13.37□□□□□ -0.27
HSPG2-211ENST00000486901 PLCH1Q4KWH8 1693 aa13.36□□□□□ -0.27
HSPG2-211ENST00000486901 RPTORQ8N122 1335 aa13.36□□□□□ -0.27
HSPG2-211ENST00000486901 DDX3YO15523 660 aaKnown RBP13.36□□□□□ -0.27
HSPG2-211ENST00000486901 PPIP5K2O43314 1243 aa13.36□□□□□ -0.27
HSPG2-211ENST00000486901 SPOPO43791 374 aa13.36□□□□□ -0.27
HSPG2-211ENST00000486901 FAM13AO94988 1023 aa13.36□□□□□ -0.27
HSPG2-211ENST00000486901 GNA14O95837 355 aa13.36□□□□□ -0.27
HSPG2-211ENST00000486901 KRT16P08779 473 aa13.36□□□□□ -0.27
HSPG2-211ENST00000486901 KYNUQ16719 465 aa13.36□□□□□ -0.27
HSPG2-211ENST00000486901 ZNF804AQ7Z570 1209 aa13.36□□□□□ -0.27
HSPG2-211ENST00000486901 SPOCK2Q92563 424 aa13.36□□□□□ -0.27
HSPG2-211ENST00000486901 ZNF317Q96PQ6 595 aaPredicted RBP13.36□□□□□ -0.27
HSPG2-211ENST00000486901 LRRC27Q9C0I9 530 aa13.36□□□□□ -0.27
HSPG2-211ENST00000486901 NT5C3AQ9H0P0 336 aa13.36□□□□□ -0.27
HSPG2-211ENST00000486901 PABPC3Q9H361 631 aaKnown RBP13.36□□□□□ -0.27
HSPG2-211ENST00000486901 ASIC3Q9UHC3 531 aa13.36□□□□□ -0.27
HSPG2-211ENST00000486901 CCNL1Q9UK58 526 aaPredicted RBP13.36□□□□□ -0.27
HSPG2-211ENST00000486901 PARP4Q9UKK3 1724 aaKnown RBP13.36□□□□□ -0.27
HSPG2-211ENST00000486901 CCDC188H7C350 402 aa13.36□□□□□ -0.27
HSPG2-211ENST00000486901 SPAG7O75391 227 aa13.36□□□□□ -0.27
HSPG2-211ENST00000486901 PYGMP11217 842 aa13.36□□□□□ -0.27
HSPG2-211ENST00000486901 GCKP35557 465 aa13.36□□□□□ -0.27
HSPG2-211ENST00000486901 SSR1P43307 286 aaKnown RBP13.36□□□□□ -0.27
HSPG2-211ENST00000486901 RHBDL3P58872 404 aa13.36□□□□□ -0.27
HSPG2-211ENST00000486901 ZNF543Q08ER8 600 aa13.36□□□□□ -0.27
HSPG2-211ENST00000486901 AGBL2Q5U5Z8 902 aa13.36□□□□□ -0.27
HSPG2-211ENST00000486901 HOOK3Q86VS8 718 aa13.36□□□□□ -0.27
HSPG2-211ENST00000486901 ATXN2LQ8WWM7 1075 aaKnown RBP13.36□□□□□ -0.27
HSPG2-211ENST00000486901 HES6Q96HZ4 224 aa13.36□□□□□ -0.27
HSPG2-211ENST00000486901 TMEM237Q96Q45 408 aa13.36□□□□□ -0.27
HSPG2-211ENST00000486901 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.36□□□□□ -0.27
HSPG2-211ENST00000486901 TMEM120BA0PK00 339 aa13.36□□□□□ -0.27
HSPG2-211ENST00000486901 KIAA0391O15091 583 aaKnown RBP13.36□□□□□ -0.27
HSPG2-211ENST00000486901 COMTP21964 271 aa13.36□□□□□ -0.27
HSPG2-211ENST00000486901 TM4SF1P30408 202 aa13.36□□□□□ -0.27
HSPG2-211ENST00000486901 GSTO1P78417 241 aa13.36□□□□□ -0.27
HSPG2-211ENST00000486901 KLRC3Q07444 240 aa13.36□□□□□ -0.27
HSPG2-211ENST00000486901 ZYXQ15942 572 aaKnown RBP13.36□□□□□ -0.27
HSPG2-211ENST00000486901 DPY19L2P1Q6NXN4 242 aa13.36□□□□□ -0.27
HSPG2-211ENST00000486901 PRELID2Q8N945 189 aa13.36□□□□□ -0.27
HSPG2-211ENST00000486901 TRIM7Q9C029 511 aa13.36□□□□□ -0.27
HSPG2-211ENST00000486901 RAB17Q9H0T7 212 aa13.36□□□□□ -0.27
HSPG2-211ENST00000486901 SUCLA2Q9P2R7 463 aaPredicted RBP13.36□□□□□ -0.27
HSPG2-211ENST00000486901 A0A1B0GUL6 1792 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms