RNA–Protein interactions for RNA: ENST00000486806.1

MCF2L-227, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-227ENST00000486806 MYCT1Q8N699 235 aa10.58□□□□□ -0.72
MCF2L-227ENST00000486806 GLIS3Q8NEA6 775 aa10.58□□□□□ -0.72
MCF2L-227ENST00000486806 PRPF31Q8WWY3 499 aaKnown RBP10.58□□□□□ -0.72
MCF2L-227ENST00000486806 PAWRQ96IZ0 340 aaKnown RBP10.58□□□□□ -0.72
MCF2L-227ENST00000486806 MAP7D2Q96T17 732 aa10.58□□□□□ -0.72
MCF2L-227ENST00000486806 NTPCRQ9BSD7 190 aaKnown RBP10.58□□□□□ -0.72
MCF2L-227ENST00000486806 KIFC3Q9BVG8 833 aa10.58□□□□□ -0.72
MCF2L-227ENST00000486806 NFKBIZQ9BYH8 718 aa10.58□□□□□ -0.72
MCF2L-227ENST00000486806 FAM49AQ9H0Q0 323 aaPredicted RBP10.58□□□□□ -0.72
MCF2L-227ENST00000486806 ST6GALNAC4Q9H4F1 302 aa10.58□□□□□ -0.72
MCF2L-227ENST00000486806 ZHX3Q9H4I2 956 aa10.58□□□□□ -0.72
MCF2L-227ENST00000486806 ARHGAP28Q9P2N2 729 aa10.58□□□□□ -0.72
MCF2L-227ENST00000486806 GDAQ9Y2T3 454 aa10.58□□□□□ -0.72
MCF2L-227ENST00000486806 BIN1O00499 593 aa10.57□□□□□ -0.72
MCF2L-227ENST00000486806 ASAP2O43150 1006 aa10.57□□□□□ -0.72
MCF2L-227ENST00000486806 CAND2O75155 1236 aa10.57□□□□□ -0.72
MCF2L-227ENST00000486806 GPR32O75388 356 aa10.57□□□□□ -0.72
MCF2L-227ENST00000486806 VTNP04004 478 aa10.57□□□□□ -0.72
MCF2L-227ENST00000486806 ATN1P54259 1190 aaPredicted RBP10.57□□□□□ -0.72
MCF2L-227ENST00000486806 POU5F1BQ06416 359 aa10.57□□□□□ -0.72
MCF2L-227ENST00000486806 MGAT3Q09327 533 aa10.57□□□□□ -0.72
MCF2L-227ENST00000486806 BMT2Q1RMZ1 405 aa10.57□□□□□ -0.72
MCF2L-227ENST00000486806 DPCR1Q3MIW9 517 aa10.57□□□□□ -0.72
MCF2L-227ENST00000486806 ZNF720Q7Z2F6 126 aa10.57□□□□□ -0.72
MCF2L-227ENST00000486806 NECAB2Q7Z6G3 386 aa10.57□□□□□ -0.72
MCF2L-227ENST00000486806 ZNF410Q86VK4 478 aa10.57□□□□□ -0.72
MCF2L-227ENST00000486806 RHPN2Q8IUC4 686 aa10.57□□□□□ -0.72
MCF2L-227ENST00000486806 KSR1Q8IVT5 923 aa10.57□□□□□ -0.72
MCF2L-227ENST00000486806 FAM178BQ8IXR5 827 aa10.57□□□□□ -0.72
MCF2L-227ENST00000486806 SMYD4Q8IYR2 804 aaPredicted RBP10.57□□□□□ -0.72
MCF2L-227ENST00000486806 NME8Q8N427 588 aa10.57□□□□□ -0.72
MCF2L-227ENST00000486806 SLC17A8Q8NDX2 589 aa10.57□□□□□ -0.72
MCF2L-227ENST00000486806 TMEM161BQ8NDZ6 487 aa10.57□□□□□ -0.72
MCF2L-227ENST00000486806 DNAJB3Q8WWF6 145 aa10.57□□□□□ -0.72
MCF2L-227ENST00000486806 CCDC47Q96A33 483 aaKnown RBP10.57□□□□□ -0.72
MCF2L-227ENST00000486806 ABHD8Q96I13 439 aa10.57□□□□□ -0.72
MCF2L-227ENST00000486806 IFT74Q96LB3 600 aa10.57□□□□□ -0.72
MCF2L-227ENST00000486806 TOX2Q96NM4 488 aa10.57□□□□□ -0.72
MCF2L-227ENST00000486806 GTPBP4Q9BZE4 634 aaKnown RBP10.57□□□□□ -0.72
MCF2L-227ENST00000486806 CCDC113Q9H0I3 377 aa10.57□□□□□ -0.72
MCF2L-227ENST00000486806 TRPV6Q9H1D0 765 aa10.57□□□□□ -0.72
MCF2L-227ENST00000486806 ADAMTS10Q9H324 1103 aa10.57□□□□□ -0.72
MCF2L-227ENST00000486806 IFT122Q9HBG6 1241 aa10.57□□□□□ -0.72
MCF2L-227ENST00000486806 AKT3Q9Y243 479 aa10.57□□□□□ -0.72
MCF2L-227ENST00000486806 UBE4BO95155 1302 aa10.57□□□□□ -0.72
MCF2L-227ENST00000486806 PHLPP2Q6ZVD8 1323 aa10.57□□□□□ -0.72
MCF2L-227ENST00000486806 MKI67P46013 3256 aaKnown RBP10.56□□□□□ -0.72
MCF2L-227ENST00000486806 ZMYM2Q9UBW7 1377 aa10.56□□□□□ -0.72
MCF2L-227ENST00000486806 K7ENM7 598 aa10.56□□□□□ -0.72
MCF2L-227ENST00000486806 EIF3DO15371 548 aaKnown RBP eCLIP10.56□□□□□ -0.72
MCF2L-227ENST00000486806 SLC16A4O15374 487 aa10.56□□□□□ -0.72
MCF2L-227ENST00000486806 MYBP10242 640 aa10.56□□□□□ -0.72
MCF2L-227ENST00000486806 SCP2P22307 547 aa10.56□□□□□ -0.72
MCF2L-227ENST00000486806 NMT1P30419 496 aaKnown RBP10.56□□□□□ -0.72
MCF2L-227ENST00000486806 NLRP12P59046 1061 aa10.56□□□□□ -0.72
MCF2L-227ENST00000486806 ZNF445P59923 1031 aa10.56□□□□□ -0.72
MCF2L-227ENST00000486806 PTENP60484 403 aa10.56□□□□□ -0.72
MCF2L-227ENST00000486806 GTF2BQ00403 316 aa10.56□□□□□ -0.72
MCF2L-227ENST00000486806 TYRO3Q06418 890 aa10.56□□□□□ -0.72
MCF2L-227ENST00000486806 ALCAMQ13740 583 aa10.56□□□□□ -0.72
MCF2L-227ENST00000486806 TFDP1Q14186 410 aa10.56□□□□□ -0.72
MCF2L-227ENST00000486806 STX1AQ16623 288 aa10.56□□□□□ -0.72
MCF2L-227ENST00000486806 LRRC26Q2I0M4 334 aa10.56□□□□□ -0.72
MCF2L-227ENST00000486806 TRIM60Q495X7 471 aa10.56□□□□□ -0.72
MCF2L-227ENST00000486806 TRAF7Q6Q0C0 670 aa10.56□□□□□ -0.72
MCF2L-227ENST00000486806 TAS1R3Q7RTX0 852 aa10.56□□□□□ -0.72
MCF2L-227ENST00000486806 ZNF710Q8N1W2 664 aa10.56□□□□□ -0.72
MCF2L-227ENST00000486806 RNF149Q8NC42 400 aa10.56□□□□□ -0.72
MCF2L-227ENST00000486806 SCFD1Q8WVM8 642 aa10.56□□□□□ -0.72
MCF2L-227ENST00000486806 NLRP4Q96MN2 994 aa10.56□□□□□ -0.72
MCF2L-227ENST00000486806 MRPL44Q9H9J2 332 aaKnown RBP10.56□□□□□ -0.72
MCF2L-227ENST00000486806 SLC39A2Q9NP94 309 aa10.56□□□□□ -0.72
MCF2L-227ENST00000486806 KMT5AQ9NQR1 393 aa10.56□□□□□ -0.72
MCF2L-227ENST00000486806 TBC1D7Q9P0N9 293 aa10.56□□□□□ -0.72
MCF2L-227ENST00000486806 KCNG1Q9UIX4 513 aa10.56□□□□□ -0.72
MCF2L-227ENST00000486806 NOD1Q9Y239 953 aa10.56□□□□□ -0.72
MCF2L-227ENST00000486806 A0A087WZ62 844 aa10.55□□□□□ -0.72
MCF2L-227ENST00000486806 LRRIQ4A6NIV6 560 aa10.55□□□□□ -0.72
MCF2L-227ENST00000486806 CCDC169A6NNP5 214 aa10.55□□□□□ -0.72
MCF2L-227ENST00000486806 H0YCG3 227 aa10.55□□□□□ -0.72
MCF2L-227ENST00000486806 PQBP1O60828 265 aaKnown RBP10.55□□□□□ -0.72
MCF2L-227ENST00000486806 GCNT3O95395 438 aa10.55□□□□□ -0.72
MCF2L-227ENST00000486806 CD44P16070 742 aaKnown RBP10.55□□□□□ -0.72
MCF2L-227ENST00000486806 HOXD13P35453 343 aa10.55□□□□□ -0.72
MCF2L-227ENST00000486806 PHKA2P46019 1235 aa10.55□□□□□ -0.72
MCF2L-227ENST00000486806 SMTNP53814 917 aa10.55□□□□□ -0.72
MCF2L-227ENST00000486806 NLRP11P59045 1033 aaKnown RBP10.55□□□□□ -0.72
MCF2L-227ENST00000486806 MRPS6P82932 125 aaKnown RBP10.55□□□□□ -0.72
MCF2L-227ENST00000486806 CDC42EP1Q00587 391 aa10.55□□□□□ -0.72
MCF2L-227ENST00000486806 MBTD1Q05BQ5 628 aa10.55□□□□□ -0.72
MCF2L-227ENST00000486806 TMEM62Q0P6H9 643 aa10.55□□□□□ -0.72
MCF2L-227ENST00000486806 FAAP100Q0VG06 881 aa10.55□□□□□ -0.72
MCF2L-227ENST00000486806 KIZQ2M2Z5 673 aa10.55□□□□□ -0.72
MCF2L-227ENST00000486806 ZC2HC1CQ53FD0 456 aaPredicted RBP10.55□□□□□ -0.72
MCF2L-227ENST00000486806 FAM26DQ5JW98 314 aa10.55□□□□□ -0.72
MCF2L-227ENST00000486806 L1TD1Q5T7N2 865 aaKnown RBP10.55□□□□□ -0.72
MCF2L-227ENST00000486806 ISM2Q6H9L7 571 aa10.55□□□□□ -0.72
MCF2L-227ENST00000486806 SASS6Q6UVJ0 657 aa10.55□□□□□ -0.72
MCF2L-227ENST00000486806 HAUS6Q7Z4H7 955 aa10.55□□□□□ -0.72
MCF2L-227ENST00000486806 RSPH3Q86UC2 560 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms