RNA–Protein interactions for RNA: ENST00000485591.1

COL6A2-208, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 3

Gene COL6A2, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-208ENST00000485591 MAGEA10P43363 369 aaPredicted RBP22.05■■□□□ 1.12
COL6A2-208ENST00000485591 UBE2HP62256 183 aa22.05■■□□□ 1.12
COL6A2-208ENST00000485591 FAM160A1Q05DH4 1040 aa22.05■■□□□ 1.12
COL6A2-208ENST00000485591 GIT2Q14161 759 aa22.05■■□□□ 1.12
COL6A2-208ENST00000485591 LPIN1Q14693 890 aa22.05■■□□□ 1.12
COL6A2-208ENST00000485591 PPP2R5AQ15172 486 aa22.05■■□□□ 1.12
COL6A2-208ENST00000485591 TSHZ1Q6ZSZ6 1077 aa22.05■■□□□ 1.12
COL6A2-208ENST00000485591 RPUSD2Q8IZ73 545 aaKnown RBP22.05■■□□□ 1.12
COL6A2-208ENST00000485591 FMR1NBQ8N0W7 255 aaPredicted RBP22.05■■□□□ 1.12
COL6A2-208ENST00000485591 RNF149Q8NC42 400 aa22.05■■□□□ 1.12
COL6A2-208ENST00000485591 BSNDQ8WZ55 320 aa22.05■■□□□ 1.12
COL6A2-208ENST00000485591 VWCEQ96DN2 955 aa22.05■■□□□ 1.12
COL6A2-208ENST00000485591 ZNF668Q96K58 619 aaPredicted RBP22.05■■□□□ 1.12
COL6A2-208ENST00000485591 FDXACB1Q9BRP7 624 aaPredicted RBP22.05■■□□□ 1.12
COL6A2-208ENST00000485591 OSBPL7Q9BZF2 842 aa22.05■■□□□ 1.12
COL6A2-208ENST00000485591 IFT122Q9HBG6 1241 aa22.05■■□□□ 1.12
COL6A2-208ENST00000485591 IL23AQ9NPF7 189 aa22.05■■□□□ 1.12
COL6A2-208ENST00000485591 PRPF40AO75400 957 aaKnown RBP22.04■■□□□ 1.12
COL6A2-208ENST00000485591 ZNF202O95125 648 aa22.04■■□□□ 1.12
COL6A2-208ENST00000485591 SRGAP2CP0DJJ0 459 aa22.04■■□□□ 1.12
COL6A2-208ENST00000485591 DARSP14868 501 aaKnown RBP22.04■■□□□ 1.12
COL6A2-208ENST00000485591 EIF4BP23588 611 aaKnown RBP22.04■■□□□ 1.12
COL6A2-208ENST00000485591 NAMPTP43490 491 aa22.04■■□□□ 1.12
COL6A2-208ENST00000485591 PHKA2P46019 1235 aa22.04■■□□□ 1.12
COL6A2-208ENST00000485591 AMPD3Q01432 767 aa22.04■■□□□ 1.12
COL6A2-208ENST00000485591 CACNB1Q02641 598 aaPredicted RBP22.04■■□□□ 1.12
COL6A2-208ENST00000485591 LONRF3Q496Y0 759 aa22.04■■□□□ 1.12
COL6A2-208ENST00000485591 DEFB128Q7Z7B8 93 aa22.04■■□□□ 1.12
COL6A2-208ENST00000485591 IFNLR1Q8IU57 520 aaPredicted RBP22.04■■□□□ 1.12
COL6A2-208ENST00000485591 ENGASEQ8NFI3 743 aa22.04■■□□□ 1.12
COL6A2-208ENST00000485591 DDX12PQ92771 950 aa22.04■■□□□ 1.12
COL6A2-208ENST00000485591 IFT74Q96LB3 600 aa22.04■■□□□ 1.12
COL6A2-208ENST00000485591 NFKBIZQ9BYH8 718 aa22.04■■□□□ 1.12
COL6A2-208ENST00000485591 GCOM2Q9BZD3 368 aaPredicted RBP22.04■■□□□ 1.12
COL6A2-208ENST00000485591 POLD4Q9HCU8 107 aa22.04■■□□□ 1.12
COL6A2-208ENST00000485591 MICAL3Q7RTP6 2002 aa22.04■■□□□ 1.12
COL6A2-208ENST00000485591 ZNF131P52739 623 aa22.03■■□□□ 1.12
COL6A2-208ENST00000485591 SNW1Q13573 536 aaKnown RBP22.03■■□□□ 1.12
COL6A2-208ENST00000485591 PLEKHG4Q58EX7 1191 aa22.03■■□□□ 1.12
COL6A2-208ENST00000485591 CNNM4Q6P4Q7 775 aa22.03■■□□□ 1.12
COL6A2-208ENST00000485591 KRBA2Q6ZNG9 492 aa22.03■■□□□ 1.12
COL6A2-208ENST00000485591 DYMQ7RTS9 669 aa22.03■■□□□ 1.12
COL6A2-208ENST00000485591 SRGAP1Q7Z6B7 1085 aa22.03■■□□□ 1.12
COL6A2-208ENST00000485591 STAMQ92783 540 aa22.03■■□□□ 1.12
COL6A2-208ENST00000485591 DNAJC19Q96DA6 116 aa22.03■■□□□ 1.12
COL6A2-208ENST00000485591 GDF15Q99988 308 aa22.03■■□□□ 1.12
COL6A2-208ENST00000485591 TRIM9Q9C026 710 aa22.03■■□□□ 1.12
COL6A2-208ENST00000485591 INO80BQ9C086 356 aaPredicted RBP22.03■■□□□ 1.12
COL6A2-208ENST00000485591 AGO3Q9H9G7 860 aaKnown RBP22.03■■□□□ 1.12
COL6A2-208ENST00000485591 NOC2LQ9Y3T9 749 aaKnown RBP22.03■■□□□ 1.12
COL6A2-208ENST00000485591 LRRIQ4A6NIV6 560 aa22.02■■□□□ 1.12
COL6A2-208ENST00000485591 TBCAO75347 108 aaKnown RBP22.02■■□□□ 1.12
COL6A2-208ENST00000485591 RPS6KA5O75582 802 aa22.02■■□□□ 1.12
COL6A2-208ENST00000485591 FAM13AO94988 1023 aa22.02■■□□□ 1.12
COL6A2-208ENST00000485591 PLS3P13797 630 aa22.02■■□□□ 1.12
COL6A2-208ENST00000485591 PTENP60484 403 aa22.02■■□□□ 1.12
COL6A2-208ENST00000485591 DMP1Q13316 513 aaPredicted RBP22.02■■□□□ 1.12
COL6A2-208ENST00000485591 ODR4Q5SWX8 454 aa22.02■■□□□ 1.12
COL6A2-208ENST00000485591 CDCA2Q69YH5 1023 aaPredicted RBP22.02■■□□□ 1.12
COL6A2-208ENST00000485591 PSRC1Q6PGN9 363 aaPredicted RBP22.02■■□□□ 1.12
COL6A2-208ENST00000485591 C7orf25Q9BPX7 421 aa22.02■■□□□ 1.12
COL6A2-208ENST00000485591 IFIH1Q9BYX4 1025 aaKnown RBP22.02■■□□□ 1.12
COL6A2-208ENST00000485591 LARSQ9P2J5 1176 aaKnown RBP22.02■■□□□ 1.12
COL6A2-208ENST00000485591 SFI1A8K8P3 1242 aa22.01■■□□□ 1.11
COL6A2-208ENST00000485591 GOLGA6L22H0YM25 854 aa22.01■■□□□ 1.11
COL6A2-208ENST00000485591 LIG1P18858 919 aa22.01■■□□□ 1.11
COL6A2-208ENST00000485591 CD52P31358 61 aa22.01■■□□□ 1.11
COL6A2-208ENST00000485591 EPHB4P54760 987 aa22.01■■□□□ 1.11
COL6A2-208ENST00000485591 PEX3P56589 373 aa22.01■■□□□ 1.11
COL6A2-208ENST00000485591 PAK2Q13177 524 aa22.01■■□□□ 1.11
COL6A2-208ENST00000485591 CNKSR3Q6P9H4 555 aa22.01■■□□□ 1.11
COL6A2-208ENST00000485591 C16orf59Q7L2K0 433 aa22.01■■□□□ 1.11
COL6A2-208ENST00000485591 FAM228AQ86W67 206 aa22.01■■□□□ 1.11
COL6A2-208ENST00000485591 CNNM3Q8NE01 707 aa22.01■■□□□ 1.11
COL6A2-208ENST00000485591 SPIRE2Q8WWL2 714 aa22.01■■□□□ 1.11
COL6A2-208ENST00000485591 SEPT8Q92599 483 aa22.01■■□□□ 1.11
COL6A2-208ENST00000485591 APBB2Q92870 758 aa22.01■■□□□ 1.11
COL6A2-208ENST00000485591 PAGE5Q96GU1 130 aa22.01■■□□□ 1.11
COL6A2-208ENST00000485591 C2orf40Q9H1Z8 148 aa22.01■■□□□ 1.11
COL6A2-208ENST00000485591 PARVGQ9HBI0 331 aa22.01■■□□□ 1.11
COL6A2-208ENST00000485591 ERVK-5Q9HDB9 667 aa22.01■■□□□ 1.11
COL6A2-208ENST00000485591 KCNG1Q9UIX4 513 aa22.01■■□□□ 1.11
COL6A2-208ENST00000485591 FRMD3A2A2Y4 597 aa22■■□□□ 1.11
COL6A2-208ENST00000485591 GPR182O15218 404 aa22■■□□□ 1.11
COL6A2-208ENST00000485591 MYL1P05976 194 aa22■■□□□ 1.11
COL6A2-208ENST00000485591 ACRP10323 421 aa22■■□□□ 1.11
COL6A2-208ENST00000485591 SFPQP23246 707 aaKnown RBP eCLIP22■■□□□ 1.11
COL6A2-208ENST00000485591 AFMP43652 599 aa22■■□□□ 1.11
COL6A2-208ENST00000485591 NPTX2P47972 431 aa22■■□□□ 1.11
COL6A2-208ENST00000485591 FAM43BQ6ZT52 329 aaPredicted RBP22■■□□□ 1.11
COL6A2-208ENST00000485591 ZBTB8OSQ8IWT0 167 aa22■■□□□ 1.11
COL6A2-208ENST00000485591 DBF4BQ8NFT6 615 aa22■■□□□ 1.11
COL6A2-208ENST00000485591 DEPTORQ8TB45 409 aa22■■□□□ 1.11
COL6A2-208ENST00000485591 CCDC34Q96HJ3 373 aa22■■□□□ 1.11
COL6A2-208ENST00000485591 TIGD1Q96MW7 591 aa22■■□□□ 1.11
COL6A2-208ENST00000485591 NTPCRQ9BSD7 190 aaKnown RBP22■■□□□ 1.11
COL6A2-208ENST00000485591 MINDY3Q9H8M7 445 aa22■■□□□ 1.11
COL6A2-208ENST00000485591 LMBRD1Q9NUN5 540 aa22■■□□□ 1.11
COL6A2-208ENST00000485591 PADI3Q9ULW8 664 aa22■■□□□ 1.11
COL6A2-208ENST00000485591 ADGRA3Q8IWK6 1321 aa22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms