RNA–Protein interactions for RNA: ENST00000485367.5

DDX56-212, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-212ENST00000485367 WASF1Q92558 559 aa11.93□□□□□ -0.5
DDX56-212ENST00000485367 LLPHQ9BRT6 129 aaKnown RBP11.93□□□□□ -0.5
DDX56-212ENST00000485367 SRRTQ9BXP5 876 aaKnown RBP11.93□□□□□ -0.5
DDX56-212ENST00000485367 UNC45AQ9H3U1 944 aa11.93□□□□□ -0.5
DDX56-212ENST00000485367 ARGLU1Q9NWB6 273 aaPredicted RBP11.93□□□□□ -0.5
DDX56-212ENST00000485367 GEMIN8Q9NWZ8 242 aaKnown RBP11.93□□□□□ -0.5
DDX56-212ENST00000485367 COL4A4P53420 1690 aaPredicted RBP11.93□□□□□ -0.5
DDX56-212ENST00000485367 LPXNO60711 386 aa11.92□□□□□ -0.5
DDX56-212ENST00000485367 POU3F3P20264 500 aaPredicted RBP11.92□□□□□ -0.5
DDX56-212ENST00000485367 SFNP31947 248 aa11.92□□□□□ -0.5
DDX56-212ENST00000485367 JAK3P52333 1124 aa11.92□□□□□ -0.5
DDX56-212ENST00000485367 PAK2Q13177 524 aa11.92□□□□□ -0.5
DDX56-212ENST00000485367 ELF2Q15723 593 aa11.92□□□□□ -0.5
DDX56-212ENST00000485367 LETM2Q2VYF4 491 aa11.92□□□□□ -0.5
DDX56-212ENST00000485367 FILIP1Q7Z7B0 1213 aa11.92□□□□□ -0.5
DDX56-212ENST00000485367 CEP57L1Q8IYX8 460 aa11.92□□□□□ -0.5
DDX56-212ENST00000485367 METTL13Q8N6R0 699 aa11.92□□□□□ -0.5
DDX56-212ENST00000485367 SP7Q8TDD2 431 aaPredicted RBP11.92□□□□□ -0.5
DDX56-212ENST00000485367 GTF3C6Q969F1 213 aa11.92□□□□□ -0.5
DDX56-212ENST00000485367 FAM167AQ96KS9 214 aa11.92□□□□□ -0.5
DDX56-212ENST00000485367 BPIFA3Q9BQP9 254 aa11.92□□□□□ -0.5
DDX56-212ENST00000485367 C17orf80Q9BSJ5 609 aa11.92□□□□□ -0.5
DDX56-212ENST00000485367 TSPYL2Q9H2G4 693 aaPredicted RBP11.92□□□□□ -0.5
DDX56-212ENST00000485367 SUGCTQ9HAC7 445 aa11.92□□□□□ -0.5
DDX56-212ENST00000485367 THEGQ9P2T0 379 aa11.92□□□□□ -0.5
DDX56-212ENST00000485367 DDX25Q9UHL0 483 aaKnown RBP11.92□□□□□ -0.5
DDX56-212ENST00000485367 PADI3Q9ULW8 664 aa11.92□□□□□ -0.5
DDX56-212ENST00000485367 SQORQ9Y6N5 450 aa11.92□□□□□ -0.5
DDX56-212ENST00000485367 IGSF9BQ9UPX0 1349 aa11.92□□□□□ -0.5
DDX56-212ENST00000485367 C22orf31O95567 290 aa11.92□□□□□ -0.5
DDX56-212ENST00000485367 SNW1Q13573 536 aaKnown RBP11.92□□□□□ -0.5
DDX56-212ENST00000485367 TMEM266Q2M3C6 531 aa11.92□□□□□ -0.5
DDX56-212ENST00000485367 TEX35Q5T0J7 233 aa11.92□□□□□ -0.5
DDX56-212ENST00000485367 AXDND1Q5T1B0 1012 aaPredicted RBP11.92□□□□□ -0.5
DDX56-212ENST00000485367 MIER3Q7Z3K6 550 aa11.92□□□□□ -0.5
DDX56-212ENST00000485367 FBXO22Q8NEZ5 403 aa11.92□□□□□ -0.5
DDX56-212ENST00000485367 OXER1Q8TDS5 423 aa11.92□□□□□ -0.5
DDX56-212ENST00000485367 MBOAT7Q96N66 472 aa11.92□□□□□ -0.5
DDX56-212ENST00000485367 PPP1R16BQ96T49 567 aa11.92□□□□□ -0.5
DDX56-212ENST00000485367 CDHR5Q9HBB8 845 aa11.92□□□□□ -0.5
DDX56-212ENST00000485367 NRBP2Q9NSY0 501 aa11.92□□□□□ -0.5
DDX56-212ENST00000485367 RCOR1Q9UKL0 485 aa11.92□□□□□ -0.5
DDX56-212ENST00000485367 CEP131Q9UPN4 1083 aa11.92□□□□□ -0.5
DDX56-212ENST00000485367 TTC3P53804 2025 aa11.91□□□□□ -0.5
DDX56-212ENST00000485367 USP27XA6NNY8 438 aa11.91□□□□□ -0.5
DDX56-212ENST00000485367 CLGNO14967 610 aa11.91□□□□□ -0.5
DDX56-212ENST00000485367 ZNF862O60290 1169 aa11.91□□□□□ -0.5
DDX56-212ENST00000485367 PSMD10O75832 226 aa11.91□□□□□ -0.5
DDX56-212ENST00000485367 OATP04181 439 aa11.91□□□□□ -0.5
DDX56-212ENST00000485367 FDPSP14324 419 aaKnown RBP11.91□□□□□ -0.5
DDX56-212ENST00000485367 IBSPP21815 317 aaPredicted RBP11.91□□□□□ -0.5
DDX56-212ENST00000485367 FOSBP53539 338 aa11.91□□□□□ -0.5
DDX56-212ENST00000485367 TPM4P67936 248 aa11.91□□□□□ -0.5
DDX56-212ENST00000485367 PRKCEQ02156 737 aa11.91□□□□□ -0.5
DDX56-212ENST00000485367 NFX1Q12986 1120 aaKnown RBP11.91□□□□□ -0.5
DDX56-212ENST00000485367 UGCGQ16739 394 aa11.91□□□□□ -0.5
DDX56-212ENST00000485367 MOXD1Q6UVY6 613 aa11.91□□□□□ -0.5
DDX56-212ENST00000485367 CCDC73Q6ZRK6 1079 aa11.91□□□□□ -0.5
DDX56-212ENST00000485367 PIK3AP1Q6ZUJ8 805 aa11.91□□□□□ -0.5
DDX56-212ENST00000485367 NEK8Q86SG6 692 aa11.91□□□□□ -0.5
DDX56-212ENST00000485367 ETNPPLQ8TBG4 499 aa11.91□□□□□ -0.5
DDX56-212ENST00000485367 FTHL17Q9BXU8 183 aa11.91□□□□□ -0.5
DDX56-212ENST00000485367 TFIP11Q9UBB9 837 aaKnown RBP11.91□□□□□ -0.5
DDX56-212ENST00000485367 KDM3AQ9Y4C1 1321 aa11.91□□□□□ -0.5
DDX56-212ENST00000485367 PHLPP2Q6ZVD8 1323 aa11.9□□□□□ -0.5
DDX56-212ENST00000485367 MAGEB2O15479 319 aa11.9□□□□□ -0.5
DDX56-212ENST00000485367 SLC37A4O43826 429 aa11.9□□□□□ -0.5
DDX56-212ENST00000485367 JAK2O60674 1132 aa11.9□□□□□ -0.5
DDX56-212ENST00000485367 KINO60870 393 aaKnown RBP11.9□□□□□ -0.5
DDX56-212ENST00000485367 RPS6KA5O75582 802 aa11.9□□□□□ -0.5
DDX56-212ENST00000485367 VTNP04004 478 aa11.9□□□□□ -0.5
DDX56-212ENST00000485367 KIZQ2M2Z5 673 aa11.9□□□□□ -0.5
DDX56-212ENST00000485367 TJAP1Q5JTD0 557 aa11.9□□□□□ -0.5
DDX56-212ENST00000485367 FAM173BQ6P4H8 233 aa11.9□□□□□ -0.5
DDX56-212ENST00000485367 RTN4RL1Q86UN2 441 aaPredicted RBP11.9□□□□□ -0.5
DDX56-212ENST00000485367 DHX40Q8IX18 779 aaKnown RBP11.9□□□□□ -0.5
DDX56-212ENST00000485367 FIBCD1Q8N539 461 aa11.9□□□□□ -0.5
DDX56-212ENST00000485367 RDM1Q8NG50 284 aa11.9□□□□□ -0.5
DDX56-212ENST00000485367 ATXN2LQ8WWM7 1075 aaKnown RBP11.9□□□□□ -0.5
DDX56-212ENST00000485367 LINC01599Q8WXQ3 324 aa11.9□□□□□ -0.5
DDX56-212ENST00000485367 ZNF396Q96N95 335 aaPredicted RBP11.9□□□□□ -0.5
DDX56-212ENST00000485367 NOC2LQ9Y3T9 749 aaKnown RBP11.9□□□□□ -0.5
DDX56-212ENST00000485367 TTC28Q96AY4 2481 aa11.9□□□□□ -0.5
DDX56-212ENST00000485367 MYH15Q9Y2K3 1946 aa11.9□□□□□ -0.5
DDX56-212ENST00000485367 NLRC5Q86WI3 1866 aa11.9□□□□□ -0.5
DDX56-212ENST00000485367 REV3LO60673 3130 aa11.9□□□□□ -0.51
DDX56-212ENST00000485367 H3BQV1 296 aa11.9□□□□□ -0.51
DDX56-212ENST00000485367 CCNT1O60563 726 aaKnown RBP11.9□□□□□ -0.51
DDX56-212ENST00000485367 KRT2P35908 639 aa11.9□□□□□ -0.51
DDX56-212ENST00000485367 CLCN3P51790 818 aa11.9□□□□□ -0.51
DDX56-212ENST00000485367 MRPS5P82675 430 aaKnown RBP11.9□□□□□ -0.51
DDX56-212ENST00000485367 FAM160A1Q05DH4 1040 aa11.9□□□□□ -0.51
DDX56-212ENST00000485367 EPC2Q52LR7 807 aa11.9□□□□□ -0.51
DDX56-212ENST00000485367 EFCAB12Q6NXP0 572 aa11.9□□□□□ -0.51
DDX56-212ENST00000485367 C11orf57Q6ZUT1 292 aaPredicted RBP11.9□□□□□ -0.51
DDX56-212ENST00000485367 TMEM192Q8IY95 271 aa11.9□□□□□ -0.51
DDX56-212ENST00000485367 LRRC71Q8N4P6 559 aa11.9□□□□□ -0.51
DDX56-212ENST00000485367 NSUN7Q8NE18 718 aaKnown RBP11.9□□□□□ -0.51
DDX56-212ENST00000485367 SYMPKQ92797 1274 aaKnown RBP11.9□□□□□ -0.51
DDX56-212ENST00000485367 SAMD11Q96NU1 681 aa11.9□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms