RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 DRP2Q13474 957 aa12.87□□□□□ -0.35
SCFD1-206ENST00000484733 CBX2Q14781 532 aaPredicted RBP12.87□□□□□ -0.35
SCFD1-206ENST00000484733 INF2Q27J81 1249 aa12.87□□□□□ -0.35
SCFD1-206ENST00000484733 RBM23Q86U06 439 aaKnown RBP12.87□□□□□ -0.35
SCFD1-206ENST00000484733 EXOC8Q8IYI6 725 aa12.87□□□□□ -0.35
SCFD1-206ENST00000484733 ABI1Q8IZP0 508 aa12.87□□□□□ -0.35
SCFD1-206ENST00000484733 LARP6Q9BRS8 491 aaKnown RBP12.87□□□□□ -0.35
SCFD1-206ENST00000484733 MRPL9Q9BYD2 267 aaKnown RBP12.87□□□□□ -0.35
SCFD1-206ENST00000484733 SLKQ9H2G2 1235 aaPredicted RBP12.87□□□□□ -0.35
SCFD1-206ENST00000484733 SPG21Q9NZD8 308 aa12.87□□□□□ -0.35
SCFD1-206ENST00000484733 VAV3Q9UKW4 847 aa12.87□□□□□ -0.35
SCFD1-206ENST00000484733 SLC37A4O43826 429 aa12.87□□□□□ -0.35
SCFD1-206ENST00000484733 SKIP12755 728 aa12.87□□□□□ -0.35
SCFD1-206ENST00000484733 KRT17Q04695 432 aa12.87□□□□□ -0.35
SCFD1-206ENST00000484733 NEK8Q86SG6 692 aa12.87□□□□□ -0.35
SCFD1-206ENST00000484733 RNF135Q8IUD6 432 aa12.87□□□□□ -0.35
SCFD1-206ENST00000484733 SUSD6Q92537 303 aa12.87□□□□□ -0.35
SCFD1-206ENST00000484733 SCLT1Q96NL6 688 aa12.87□□□□□ -0.35
SCFD1-206ENST00000484733 KCNH6Q9H252 994 aa12.87□□□□□ -0.35
SCFD1-206ENST00000484733 SUCLA2Q9P2R7 463 aaPredicted RBP12.87□□□□□ -0.35
SCFD1-206ENST00000484733 KCNJ14Q9UNX9 436 aa12.87□□□□□ -0.35
SCFD1-206ENST00000484733 CCDC194A0A1B0GVG4 234 aa12.86□□□□□ -0.35
SCFD1-206ENST00000484733 EML1O00423 815 aa12.86□□□□□ -0.35
SCFD1-206ENST00000484733 SRGAP2BP0DMP2 458 aa12.86□□□□□ -0.35
SCFD1-206ENST00000484733 SFPQP23246 707 aaKnown RBP eCLIP12.86□□□□□ -0.35
SCFD1-206ENST00000484733 QARSP47897 775 aaKnown RBP12.86□□□□□ -0.35
SCFD1-206ENST00000484733 ANKRD1Q15327 319 aa12.86□□□□□ -0.35
SCFD1-206ENST00000484733 LETM2Q2VYF4 491 aa12.86□□□□□ -0.35
SCFD1-206ENST00000484733 ANO5Q75V66 913 aa12.86□□□□□ -0.35
SCFD1-206ENST00000484733 SLC39A11Q8N1S5 342 aa12.86□□□□□ -0.35
SCFD1-206ENST00000484733 VN1R2Q8NFZ6 395 aa12.86□□□□□ -0.35
SCFD1-206ENST00000484733 ZNF668Q96K58 619 aaPredicted RBP12.86□□□□□ -0.35
SCFD1-206ENST00000484733 BARX2Q9UMQ3 279 aaPredicted RBP12.86□□□□□ -0.35
SCFD1-206ENST00000484733 USP15Q9Y4E8 981 aaPredicted RBP12.86□□□□□ -0.35
SCFD1-206ENST00000484733 A0A087WZ62 844 aa12.85□□□□□ -0.35
SCFD1-206ENST00000484733 ZNF623O75123 536 aa12.85□□□□□ -0.35
SCFD1-206ENST00000484733 P4HBP07237 508 aaKnown RBP12.85□□□□□ -0.35
SCFD1-206ENST00000484733 FGFR4P22455 802 aa12.85□□□□□ -0.35
SCFD1-206ENST00000484733 PHKA2P46019 1235 aa12.85□□□□□ -0.35
SCFD1-206ENST00000484733 EPHA7Q15375 998 aa12.85□□□□□ -0.35
SCFD1-206ENST00000484733 WASF1Q92558 559 aa12.85□□□□□ -0.35
SCFD1-206ENST00000484733 FDXACB1Q9BRP7 624 aaPredicted RBP12.85□□□□□ -0.35
SCFD1-206ENST00000484733 PHF7Q9BWX1 381 aaPredicted RBP12.85□□□□□ -0.35
SCFD1-206ENST00000484733 CYP26B1Q9NR63 512 aa12.85□□□□□ -0.35
SCFD1-206ENST00000484733 TPCN1Q9ULQ1 816 aa12.85□□□□□ -0.35
SCFD1-206ENST00000484733 TMEM150BA6NC51 233 aa12.85□□□□□ -0.35
SCFD1-206ENST00000484733 PER2O15055 1255 aa12.85□□□□□ -0.35
SCFD1-206ENST00000484733 C4orf19Q8IY42 314 aa12.85□□□□□ -0.35
SCFD1-206ENST00000484733 TCF25Q9BQ70 676 aa12.85□□□□□ -0.35
SCFD1-206ENST00000484733 S1PR5Q9H228 398 aa12.85□□□□□ -0.35
SCFD1-206ENST00000484733 CTDNEP1O95476 244 aa12.84□□□□□ -0.35
SCFD1-206ENST00000484733 HOXD11P31277 338 aaPredicted RBP12.84□□□□□ -0.35
SCFD1-206ENST00000484733 RFC5P40937 340 aa12.84□□□□□ -0.35
SCFD1-206ENST00000484733 RAB27AP51159 221 aa12.84□□□□□ -0.35
SCFD1-206ENST00000484733 PLPP4Q5VZY2 271 aa12.84□□□□□ -0.35
SCFD1-206ENST00000484733 ANKRD54Q6NXT1 300 aa12.84□□□□□ -0.35
SCFD1-206ENST00000484733 HELQQ8TDG4 1101 aa12.84□□□□□ -0.35
SCFD1-206ENST00000484733 EDAQ92838 391 aa12.84□□□□□ -0.35
SCFD1-206ENST00000484733 HAS1Q92839 578 aa12.84□□□□□ -0.35
SCFD1-206ENST00000484733 DHX33Q9H6R0 707 aaKnown RBP12.84□□□□□ -0.35
SCFD1-206ENST00000484733 ENTPD7Q9NQZ7 604 aa12.84□□□□□ -0.35
SCFD1-206ENST00000484733 GAS2O43903 313 aaKnown RBP12.84□□□□□ -0.35
SCFD1-206ENST00000484733 HOXB8P17481 243 aaPredicted RBP12.84□□□□□ -0.35
SCFD1-206ENST00000484733 SMC1AQ14683 1233 aaKnown RBP12.84□□□□□ -0.35
SCFD1-206ENST00000484733 BMP8AQ7Z5Y6 402 aa12.84□□□□□ -0.35
SCFD1-206ENST00000484733 SRGAP1Q7Z6B7 1085 aa12.84□□□□□ -0.35
SCFD1-206ENST00000484733 RHPN2Q8IUC4 686 aa12.84□□□□□ -0.35
SCFD1-206ENST00000484733 MUTYHQ9UIF7 546 aa12.84□□□□□ -0.35
SCFD1-206ENST00000484733 ASAP2O43150 1006 aa12.83□□□□□ -0.36
SCFD1-206ENST00000484733 CSDE1O75534 798 aaKnown RBP12.83□□□□□ -0.36
SCFD1-206ENST00000484733 BCAR1P56945 870 aa12.83□□□□□ -0.36
SCFD1-206ENST00000484733 PIK3AP1Q6ZUJ8 805 aa12.83□□□□□ -0.36
SCFD1-206ENST00000484733 SLFN12Q8IYM2 578 aa12.83□□□□□ -0.36
SCFD1-206ENST00000484733 MRPL43Q8N983 215 aaKnown RBP12.83□□□□□ -0.36
SCFD1-206ENST00000484733 RNF169Q8NCN4 708 aa12.83□□□□□ -0.36
SCFD1-206ENST00000484733 OXER1Q8TDS5 423 aa12.83□□□□□ -0.36
SCFD1-206ENST00000484733 IFT122Q9HBG6 1241 aa12.83□□□□□ -0.36
SCFD1-206ENST00000484733 ORC3Q9UBD5 711 aaPredicted RBP12.83□□□□□ -0.36
SCFD1-206ENST00000484733 HIDE1A8MVS5 230 aa12.83□□□□□ -0.36
SCFD1-206ENST00000484733 CCNT1O60563 726 aaKnown RBP12.83□□□□□ -0.36
SCFD1-206ENST00000484733 BAG4O95429 457 aaKnown RBP12.83□□□□□ -0.36
SCFD1-206ENST00000484733 POLGP54098 1239 aaPredicted RBP12.83□□□□□ -0.36
SCFD1-206ENST00000484733 PLA2G4FQ68DD2 849 aa12.83□□□□□ -0.36
SCFD1-206ENST00000484733 OTUD6AQ7L8S5 288 aa12.83□□□□□ -0.36
SCFD1-206ENST00000484733 CATSPER4Q7RTX7 472 aa12.83□□□□□ -0.36
SCFD1-206ENST00000484733 TMC7Q7Z402 723 aa12.83□□□□□ -0.36
SCFD1-206ENST00000484733 MRPL10Q7Z7H8 261 aaKnown RBP12.83□□□□□ -0.36
SCFD1-206ENST00000484733 SLC7A3Q8WY07 619 aa12.83□□□□□ -0.36
SCFD1-206ENST00000484733 CASP10Q92851 521 aa12.83□□□□□ -0.36
SCFD1-206ENST00000484733 TNFRSF25Q93038 417 aa12.83□□□□□ -0.36
SCFD1-206ENST00000484733 PGBD4Q96DM1 585 aa12.83□□□□□ -0.36
SCFD1-206ENST00000484733 SH2D3AQ9BRG2 576 aa12.83□□□□□ -0.36
SCFD1-206ENST00000484733 FAM105AQ9NUU6 356 aa12.83□□□□□ -0.36
SCFD1-206ENST00000484733 WRAP73Q9P2S5 460 aaPredicted RBP12.83□□□□□ -0.36
SCFD1-206ENST00000484733 COL4A3BPQ9Y5P4 624 aa12.83□□□□□ -0.36
SCFD1-206ENST00000484733 EIF5BO60841 1220 aaKnown RBP12.82□□□□□ -0.36
SCFD1-206ENST00000484733 NEFLP07196 543 aa12.82□□□□□ -0.36
SCFD1-206ENST00000484733 TECP42680 631 aa12.82□□□□□ -0.36
SCFD1-206ENST00000484733 ALDH7A1P49419 539 aaKnown RBP12.82□□□□□ -0.36
SCFD1-206ENST00000484733 NPEPPSP55786 919 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms