RNA–Protein interactions for RNA: ENST00000483925.1

PTCD3-214, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-214ENST00000483925 GPR27Q9NS67 375 aa5.36□□□□□ -1.55
PTCD3-214ENST00000483925 ASAP1Q9ULH1 1129 aa5.36□□□□□ -1.55
PTCD3-214ENST00000483925 SF3B6Q9Y3B4 125 aaKnown RBP5.36□□□□□ -1.55
PTCD3-214ENST00000483925 NOC2LQ9Y3T9 749 aaKnown RBP5.36□□□□□ -1.55
PTCD3-214ENST00000483925 FAM227AF5H4B4 570 aa5.35□□□□□ -1.55
PTCD3-214ENST00000483925 H0Y8X5 98 aa5.35□□□□□ -1.55
PTCD3-214ENST00000483925 ZRANB2O95218 330 aaKnown RBP eCLIP5.35□□□□□ -1.55
PTCD3-214ENST00000483925 CKMP06732 381 aa5.35□□□□□ -1.55
PTCD3-214ENST00000483925 LSP1P33241 339 aa5.35□□□□□ -1.55
PTCD3-214ENST00000483925 MECP2P51608 486 aaKnown RBP5.35□□□□□ -1.55
PTCD3-214ENST00000483925 EIF5P55010 431 aaKnown RBP5.35□□□□□ -1.55
PTCD3-214ENST00000483925 FOXO4P98177 505 aa5.35□□□□□ -1.55
PTCD3-214ENST00000483925 EFEMP1Q12805 493 aa5.35□□□□□ -1.55
PTCD3-214ENST00000483925 MYBPC2Q14324 1141 aa5.35□□□□□ -1.55
PTCD3-214ENST00000483925 PPP2R5DQ14738 602 aa5.35□□□□□ -1.55
PTCD3-214ENST00000483925 RTP5Q14D33 572 aa5.35□□□□□ -1.55
PTCD3-214ENST00000483925 KIAA0753Q2KHM9 967 aa5.35□□□□□ -1.55
PTCD3-214ENST00000483925 PRSS53Q2L4Q9 553 aa5.35□□□□□ -1.55
PTCD3-214ENST00000483925 DARS2Q6PI48 645 aaKnown RBP5.35□□□□□ -1.55
PTCD3-214ENST00000483925 TTLL7Q6ZT98 887 aa5.35□□□□□ -1.55
PTCD3-214ENST00000483925 C2orf69Q8N8R5 385 aa5.35□□□□□ -1.55
PTCD3-214ENST00000483925 FAM156AQ8NDB6 213 aa5.35□□□□□ -1.55
PTCD3-214ENST00000483925 IL17REQ8NFR9 667 aa5.35□□□□□ -1.55
PTCD3-214ENST00000483925 FNIP1Q8TF40 1166 aa5.35□□□□□ -1.55
PTCD3-214ENST00000483925 DIS3LQ8TF46 1054 aaKnown RBP5.35□□□□□ -1.55
PTCD3-214ENST00000483925 HPS3Q969F9 1004 aa5.35□□□□□ -1.55
PTCD3-214ENST00000483925 MAP3K14Q99558 947 aa5.35□□□□□ -1.55
PTCD3-214ENST00000483925 OXSMQ9NWU1 459 aa5.35□□□□□ -1.55
PTCD3-214ENST00000483925 EVLQ9UI08 416 aaPredicted RBP5.35□□□□□ -1.55
PTCD3-214ENST00000483925 COQ6Q9Y2Z9 468 aa5.35□□□□□ -1.55
PTCD3-214ENST00000483925 FGF10O15520 208 aaPredicted RBP5.34□□□□□ -1.55
PTCD3-214ENST00000483925 PRICKLE3O43900 615 aaPredicted RBP5.34□□□□□ -1.55
PTCD3-214ENST00000483925 TBC1D8O95759 1140 aa5.34□□□□□ -1.55
PTCD3-214ENST00000483925 SRGAP2CP0DJJ0 459 aa5.34□□□□□ -1.55
PTCD3-214ENST00000483925 FBLN1P23142 703 aa5.34□□□□□ -1.55
PTCD3-214ENST00000483925 CHKAP35790 457 aa5.34□□□□□ -1.55
PTCD3-214ENST00000483925 MAPK9P45984 424 aa5.34□□□□□ -1.55
PTCD3-214ENST00000483925 ADKP55263 362 aaKnown RBP5.34□□□□□ -1.55
PTCD3-214ENST00000483925 PHC1P78364 1004 aa5.34□□□□□ -1.55
PTCD3-214ENST00000483925 ST5P78524 1137 aa5.34□□□□□ -1.55
PTCD3-214ENST00000483925 ZNF267Q14586 743 aaPredicted RBP5.34□□□□□ -1.55
PTCD3-214ENST00000483925 ZXDCQ2QGD7 858 aaPredicted RBP5.34□□□□□ -1.55
PTCD3-214ENST00000483925 CCDC93Q567U6 631 aa5.34□□□□□ -1.55
PTCD3-214ENST00000483925 RSRC2Q7L4I2 434 aaKnown RBP5.34□□□□□ -1.55
PTCD3-214ENST00000483925 DPP9Q86TI2 863 aa5.34□□□□□ -1.55
PTCD3-214ENST00000483925 SLC41A1Q8IVJ1 513 aa5.34□□□□□ -1.55
PTCD3-214ENST00000483925 SUGP1Q8IWZ8 645 aaKnown RBP5.34□□□□□ -1.55
PTCD3-214ENST00000483925 PPIL6Q8IXY8 311 aa5.34□□□□□ -1.55
PTCD3-214ENST00000483925 FIBCD1Q8N539 461 aa5.34□□□□□ -1.55
PTCD3-214ENST00000483925 ZBTB34Q8NCN2 500 aa5.34□□□□□ -1.55
PTCD3-214ENST00000483925 KREMEN2Q8NCW0 462 aa5.34□□□□□ -1.55
PTCD3-214ENST00000483925 NAXEQ8NCW5 288 aa5.34□□□□□ -1.55
PTCD3-214ENST00000483925 NLGN2Q8NFZ4 835 aa5.34□□□□□ -1.55
PTCD3-214ENST00000483925 PCDH19Q8TAB3 1148 aa5.34□□□□□ -1.55
PTCD3-214ENST00000483925 LMBR1Q8WVP7 490 aa5.34□□□□□ -1.55
PTCD3-214ENST00000483925 GCC1Q96CN9 775 aa5.34□□□□□ -1.55
PTCD3-214ENST00000483925 ACO2Q99798 780 aaKnown RBP5.34□□□□□ -1.55
PTCD3-214ENST00000483925 CRB3Q9BUF7 120 aa5.34□□□□□ -1.55
PTCD3-214ENST00000483925 WDR12Q9GZL7 423 aaKnown RBP5.34□□□□□ -1.55
PTCD3-214ENST00000483925 TMEM60Q9H2L4 133 aa5.34□□□□□ -1.55
PTCD3-214ENST00000483925 AGO4Q9HCK5 861 aaKnown RBP5.34□□□□□ -1.55
PTCD3-214ENST00000483925 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.34□□□□□ -1.55
PTCD3-214ENST00000483925 DBR1Q9UK59 544 aaKnown RBP5.34□□□□□ -1.55
PTCD3-214ENST00000483925 HCFC2Q9Y5Z7 792 aa5.34□□□□□ -1.55
PTCD3-214ENST00000483925 PMF1-BGLAPU3KQ54 211 aa5.34□□□□□ -1.55
PTCD3-214ENST00000483925 A6NNZ2 444 aa5.33□□□□□ -1.56
PTCD3-214ENST00000483925 RASA4BC9J798 803 aa5.33□□□□□ -1.56
PTCD3-214ENST00000483925 F8W031 263 aaPredicted RBP5.33□□□□□ -1.56
PTCD3-214ENST00000483925 H7C1D1 291 aa5.33□□□□□ -1.56
PTCD3-214ENST00000483925 MEFVO15553 781 aaPredicted RBP5.33□□□□□ -1.56
PTCD3-214ENST00000483925 RASA4O43374 803 aa5.33□□□□□ -1.56
PTCD3-214ENST00000483925 ANP32CO43423 234 aa5.33□□□□□ -1.56
PTCD3-214ENST00000483925 H2AFYO75367 372 aaKnown RBP5.33□□□□□ -1.56
PTCD3-214ENST00000483925 AGR2O95994 175 aa5.33□□□□□ -1.56
PTCD3-214ENST00000483925 POU2F2P09086 479 aa5.33□□□□□ -1.56
PTCD3-214ENST00000483925 NCAM1P13591 858 aa5.33□□□□□ -1.56
PTCD3-214ENST00000483925 ATF2P15336 505 aa5.33□□□□□ -1.56
PTCD3-214ENST00000483925 TNFAIP3P21580 790 aa5.33□□□□□ -1.56
PTCD3-214ENST00000483925 LTBRP36941 435 aa5.33□□□□□ -1.56
PTCD3-214ENST00000483925 GPR3P46089 330 aa5.33□□□□□ -1.56
PTCD3-214ENST00000483925 CACNB3P54284 484 aa5.33□□□□□ -1.56
PTCD3-214ENST00000483925 CORO7P57737 925 aa5.33□□□□□ -1.56
PTCD3-214ENST00000483925 PRR5P85299 388 aa5.33□□□□□ -1.56
PTCD3-214ENST00000483925 POU4F1Q01851 419 aa5.33□□□□□ -1.56
PTCD3-214ENST00000483925 TNFAIP2Q03169 654 aa5.33□□□□□ -1.56
PTCD3-214ENST00000483925 SCRN1Q12765 414 aa5.33□□□□□ -1.56
PTCD3-214ENST00000483925 SEMA5AQ13591 1074 aa5.33□□□□□ -1.56
PTCD3-214ENST00000483925 LLGL1Q15334 1064 aa5.33□□□□□ -1.56
PTCD3-214ENST00000483925 TERF2Q15554 542 aa5.33□□□□□ -1.56
PTCD3-214ENST00000483925 VWA3BQ502W6 1294 aa5.33□□□□□ -1.56
PTCD3-214ENST00000483925 UBXN11Q5T124 520 aa5.33□□□□□ -1.56
PTCD3-214ENST00000483925 TLDC1Q6P9B6 456 aa5.33□□□□□ -1.56
PTCD3-214ENST00000483925 LBX2Q6XYB7 198 aa5.33□□□□□ -1.56
PTCD3-214ENST00000483925 LIPIQ6XZB0 460 aa5.33□□□□□ -1.56
PTCD3-214ENST00000483925 OVCH1Q7RTY7 1134 aa5.33□□□□□ -1.56
PTCD3-214ENST00000483925 CAMKK1Q8N5S9 505 aa5.33□□□□□ -1.56
PTCD3-214ENST00000483925 ERP27Q96DN0 273 aa5.33□□□□□ -1.56
PTCD3-214ENST00000483925 C1GALT1C1Q96EU7 318 aa5.33□□□□□ -1.56
PTCD3-214ENST00000483925 PPM1MQ96MI6 270 aa5.33□□□□□ -1.56
PTCD3-214ENST00000483925 ZDHHC15Q96MV8 337 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms