RNA–Protein interactions for RNA: ENST00000483503.5

SND1-210, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 5

Gene SND1, Length 603 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-210ENST00000483503 KMT5AQ9NQR1 393 aa13.02□□□□□ -0.33
SND1-210ENST00000483503 PNMA3Q9UL41 463 aa13.02□□□□□ -0.33
SND1-210ENST00000483503 ATP8B3O60423 1300 aa13.02□□□□□ -0.33
SND1-210ENST00000483503 KIAA1217Q5T5P2 1943 aa13.01□□□□□ -0.33
SND1-210ENST00000483503 A0A0U1RQJ8 604 aa13.01□□□□□ -0.33
SND1-210ENST00000483503 GLTPD2A6NH11 291 aa13.01□□□□□ -0.33
SND1-210ENST00000483503 CCDC169A6NNP5 214 aa13.01□□□□□ -0.33
SND1-210ENST00000483503 PMM2O15305 246 aa13.01□□□□□ -0.33
SND1-210ENST00000483503 SLC9A1P19634 815 aa13.01□□□□□ -0.33
SND1-210ENST00000483503 PRKCIP41743 596 aa13.01□□□□□ -0.33
SND1-210ENST00000483503 STAT1P42224 750 aa13.01□□□□□ -0.33
SND1-210ENST00000483503 NPEPPSP55786 919 aa13.01□□□□□ -0.33
SND1-210ENST00000483503 MYL7Q01449 175 aa13.01□□□□□ -0.33
SND1-210ENST00000483503 PRKCEQ02156 737 aa13.01□□□□□ -0.33
SND1-210ENST00000483503 CYP27A1Q02318 531 aa13.01□□□□□ -0.33
SND1-210ENST00000483503 CKAP4Q07065 602 aaKnown RBP13.01□□□□□ -0.33
SND1-210ENST00000483503 ELF2Q15723 593 aa13.01□□□□□ -0.33
SND1-210ENST00000483503 SLC18A3Q16572 532 aa13.01□□□□□ -0.33
SND1-210ENST00000483503 PLA2G4FQ68DD2 849 aa13.01□□□□□ -0.33
SND1-210ENST00000483503 MAP4K3Q8IVH8 894 aa13.01□□□□□ -0.33
SND1-210ENST00000483503 GPR161Q8N6U8 529 aaKnown RBP13.01□□□□□ -0.33
SND1-210ENST00000483503 FAM133AQ8N9E0 248 aa13.01□□□□□ -0.33
SND1-210ENST00000483503 ATRIPQ8WXE1 791 aa13.01□□□□□ -0.33
SND1-210ENST00000483503 CNKSR2Q8WXI2 1034 aa13.01□□□□□ -0.33
SND1-210ENST00000483503 RABGGTAQ92696 567 aa13.01□□□□□ -0.33
SND1-210ENST00000483503 RPGRIP1Q96KN7 1286 aa13.01□□□□□ -0.33
SND1-210ENST00000483503 PAGR1Q9BTK6 254 aa13.01□□□□□ -0.33
SND1-210ENST00000483503 MROH8Q9H579 483 aa13.01□□□□□ -0.33
SND1-210ENST00000483503 ZNF302Q9NR11 478 aa13.01□□□□□ -0.33
SND1-210ENST00000483503 CYP26B1Q9NR63 512 aa13.01□□□□□ -0.33
SND1-210ENST00000483503 NRBP2Q9NSY0 501 aa13.01□□□□□ -0.33
SND1-210ENST00000483503 SEPT9Q9UHD8 586 aaPredicted RBP13.01□□□□□ -0.33
SND1-210ENST00000483503 TBX20Q9UMR3 447 aa13.01□□□□□ -0.33
SND1-210ENST00000483503 IGSF9BQ9UPX0 1349 aa13.01□□□□□ -0.33
SND1-210ENST00000483503 SCN4AP35499 1836 aa13□□□□□ -0.33
SND1-210ENST00000483503 SLC16A4O15374 487 aa13□□□□□ -0.33
SND1-210ENST00000483503 ZNF862O60290 1169 aa13□□□□□ -0.33
SND1-210ENST00000483503 GRIN3BO60391 1043 aa13□□□□□ -0.33
SND1-210ENST00000483503 STBD1O95210 358 aa13□□□□□ -0.33
SND1-210ENST00000483503 TUBBP07437 444 aa13□□□□□ -0.33
SND1-210ENST00000483503 PLEKP08567 350 aaPredicted RBP13□□□□□ -0.33
SND1-210ENST00000483503 RFC5P40937 340 aa13□□□□□ -0.33
SND1-210ENST00000483503 NPTX2P47972 431 aa13□□□□□ -0.33
SND1-210ENST00000483503 VAMP7P51809 220 aa13□□□□□ -0.33
SND1-210ENST00000483503 CHMP4BP1P59074 171 aa13□□□□□ -0.33
SND1-210ENST00000483503 MCCD1P59942 119 aaPredicted RBP13□□□□□ -0.33
SND1-210ENST00000483503 CNTN2Q02246 1040 aa13□□□□□ -0.33
SND1-210ENST00000483503 SNAPC2Q13487 334 aa13□□□□□ -0.33
SND1-210ENST00000483503 ERCC6LQ2NKX8 1250 aa13□□□□□ -0.33
SND1-210ENST00000483503 PAPD7Q5XG87 772 aaKnown RBP13□□□□□ -0.33
SND1-210ENST00000483503 DPY19L2P1Q6NXN4 242 aa13□□□□□ -0.33
SND1-210ENST00000483503 RSRC2Q7L4I2 434 aaKnown RBP13□□□□□ -0.33
SND1-210ENST00000483503 KSR1Q8IVT5 923 aa13□□□□□ -0.33
SND1-210ENST00000483503 CCDC60Q8IWA6 550 aaPredicted RBP13□□□□□ -0.33
SND1-210ENST00000483503 EXOC8Q8IYI6 725 aa13□□□□□ -0.33
SND1-210ENST00000483503 TMEM161BQ8NDZ6 487 aa13□□□□□ -0.33
SND1-210ENST00000483503 SHCBP1Q8NEM2 672 aa13□□□□□ -0.33
SND1-210ENST00000483503 KCNN1Q92952 543 aa13□□□□□ -0.33
SND1-210ENST00000483503 OPTNQ96CV9 577 aa13□□□□□ -0.33
SND1-210ENST00000483503 CLMNQ96JQ2 1002 aa13□□□□□ -0.33
SND1-210ENST00000483503 FAM167AQ96KS9 214 aa13□□□□□ -0.33
SND1-210ENST00000483503 STK33Q9BYT3 514 aa13□□□□□ -0.33
SND1-210ENST00000483503 LACRTQ9GZZ8 138 aa13□□□□□ -0.33
SND1-210ENST00000483503 PDLIM7Q9NR12 457 aa13□□□□□ -0.33
SND1-210ENST00000483503 HSPBP1Q9NZL4 362 aa13□□□□□ -0.33
SND1-210ENST00000483503 JRKLQ9Y4A0 524 aa13□□□□□ -0.33
SND1-210ENST00000483503 MAFBQ9Y5Q3 323 aaPredicted RBP13□□□□□ -0.33
SND1-210ENST00000483503 FHOD1Q9Y613 1164 aa13□□□□□ -0.33
SND1-210ENST00000483503 CTAGE15A4D2H0 777 aa12.99□□□□□ -0.33
SND1-210ENST00000483503 ZNF263O14978 683 aa12.99□□□□□ -0.33
SND1-210ENST00000483503 KIAA0391O15091 583 aaKnown RBP12.99□□□□□ -0.33
SND1-210ENST00000483503 TLR2O60603 784 aa12.99□□□□□ -0.33
SND1-210ENST00000483503 CNMDO75829 334 aa12.99□□□□□ -0.33
SND1-210ENST00000483503 OATP04181 439 aa12.99□□□□□ -0.33
SND1-210ENST00000483503 CTAGE8P0CG41 777 aa12.99□□□□□ -0.33
SND1-210ENST00000483503 ACTN1P12814 892 aa12.99□□□□□ -0.33
SND1-210ENST00000483503 GARTP22102 1010 aa12.99□□□□□ -0.33
SND1-210ENST00000483503 JAM2P57087 298 aa12.99□□□□□ -0.33
SND1-210ENST00000483503 AMPD2Q01433 879 aa12.99□□□□□ -0.33
SND1-210ENST00000483503 KCTD2Q14681 263 aa12.99□□□□□ -0.33
SND1-210ENST00000483503 IFI16Q16666 785 aaKnown RBP12.99□□□□□ -0.33
SND1-210ENST00000483503 LDLRAD1Q5T700 205 aa12.99□□□□□ -0.33
SND1-210ENST00000483503 IQCEQ6IPM2 695 aa12.99□□□□□ -0.33
SND1-210ENST00000483503 SEPT14Q6ZU15 432 aa12.99□□□□□ -0.33
SND1-210ENST00000483503 CYFIP1Q7L576 1253 aa12.99□□□□□ -0.33
SND1-210ENST00000483503 TRAPPC11Q7Z392 1133 aa12.99□□□□□ -0.33
SND1-210ENST00000483503 IRF2BP2Q7Z5L9 587 aa12.99□□□□□ -0.33
SND1-210ENST00000483503 CTAGE6Q86UF2 777 aa12.99□□□□□ -0.33
SND1-210ENST00000483503 CTAGE4Q8IX94 777 aa12.99□□□□□ -0.33
SND1-210ENST00000483503 SLC10A4Q96EP9 437 aa12.99□□□□□ -0.33
SND1-210ENST00000483503 NOX5Q96PH1 765 aa12.99□□□□□ -0.33
SND1-210ENST00000483503 MMP19Q99542 508 aa12.99□□□□□ -0.33
SND1-210ENST00000483503 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.99□□□□□ -0.33
SND1-210ENST00000483503 INTS2Q9H0H0 1204 aaKnown RBP12.99□□□□□ -0.33
SND1-210ENST00000483503 TAF1DQ9H5J8 278 aaPredicted RBP12.99□□□□□ -0.33
SND1-210ENST00000483503 KIAA1586Q9HCI6 787 aa12.99□□□□□ -0.33
SND1-210ENST00000483503 SIX2Q9NPC8 291 aa12.99□□□□□ -0.33
SND1-210ENST00000483503 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.99□□□□□ -0.332e-6■■□□□ 12.2
SND1-210ENST00000483503 TSKSQ9UJT2 592 aa12.99□□□□□ -0.33
SND1-210ENST00000483503 SAR1BQ9Y6B6 198 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms