RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 ASTLQ6HA08 431 aaPredicted RBP8.35□□□□□ -1.07
CSDE1-206ENST00000483030 DHX32Q7L7V1 743 aaKnown RBP8.35□□□□□ -1.07
CSDE1-206ENST00000483030 ZNF598Q86UK7 904 aaKnown RBP8.35□□□□□ -1.07
CSDE1-206ENST00000483030 ZDHHC14Q8IZN3 488 aa8.35□□□□□ -1.07
CSDE1-206ENST00000483030 VPS52Q8N1B4 723 aa8.35□□□□□ -1.07
CSDE1-206ENST00000483030 ZNF710Q8N1W2 664 aa8.35□□□□□ -1.07
CSDE1-206ENST00000483030 LINC01465Q8N7H1 131 aa8.35□□□□□ -1.07
CSDE1-206ENST00000483030 ZNF713Q8N859 430 aaPredicted RBP8.35□□□□□ -1.07
CSDE1-206ENST00000483030 AUTS2Q8WXX7 1259 aa8.35□□□□□ -1.07
CSDE1-206ENST00000483030 TMEM169Q96HH4 297 aa8.35□□□□□ -1.07
CSDE1-206ENST00000483030 FAM167AQ96KS9 214 aa8.35□□□□□ -1.07
CSDE1-206ENST00000483030 SCLT1Q96NL6 688 aa8.35□□□□□ -1.07
CSDE1-206ENST00000483030 MFSD1Q9H3U5 465 aa8.35□□□□□ -1.07
CSDE1-206ENST00000483030 RYDENQ9NUL5 291 aaKnown RBP8.35□□□□□ -1.07
CSDE1-206ENST00000483030 DBR1Q9UK59 544 aaKnown RBP8.35□□□□□ -1.07
CSDE1-206ENST00000483030 NAP1L2Q9ULW6 460 aaPredicted RBP8.35□□□□□ -1.07
CSDE1-206ENST00000483030 PTPRZ1P23471 2315 aaPredicted RBP8.35□□□□□ -1.07
CSDE1-206ENST00000483030 KLF18A0A0U1RQI7 1052 aa8.34□□□□□ -1.07
CSDE1-206ENST00000483030 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.34□□□□□ -1.07
CSDE1-206ENST00000483030 PRR23AA6NEV1 266 aa8.34□□□□□ -1.07
CSDE1-206ENST00000483030 WDR64B1ANS9 1081 aa8.34□□□□□ -1.07
CSDE1-206ENST00000483030 OATP04181 439 aa8.34□□□□□ -1.07
CSDE1-206ENST00000483030 EPCAMP16422 314 aa8.34□□□□□ -1.07
CSDE1-206ENST00000483030 ADD1P35611 737 aaKnown RBP8.34□□□□□ -1.07
CSDE1-206ENST00000483030 NBL1P41271 181 aa8.34□□□□□ -1.07
CSDE1-206ENST00000483030 GPC3P51654 580 aa8.34□□□□□ -1.07
CSDE1-206ENST00000483030 SETQ01105 290 aaPredicted RBP8.34□□□□□ -1.07
CSDE1-206ENST00000483030 PFKFB3Q16875 520 aaPredicted RBP8.34□□□□□ -1.07
CSDE1-206ENST00000483030 LONRF3Q496Y0 759 aa8.34□□□□□ -1.07
CSDE1-206ENST00000483030 RNF20Q5VTR2 975 aa8.34□□□□□ -1.07
CSDE1-206ENST00000483030 TMC5Q6UXY8 1006 aa8.34□□□□□ -1.07
CSDE1-206ENST00000483030 TMEM173Q86WV6 379 aaPredicted RBP8.34□□□□□ -1.07
CSDE1-206ENST00000483030 RASEFQ8IZ41 740 aa8.34□□□□□ -1.07
CSDE1-206ENST00000483030 TDRD5Q8NAT2 981 aaKnown RBP8.34□□□□□ -1.07
CSDE1-206ENST00000483030 FEZF2Q8TBJ5 459 aa8.34□□□□□ -1.07
CSDE1-206ENST00000483030 NLRP7Q8WX94 980 aa8.34□□□□□ -1.07
CSDE1-206ENST00000483030 DCBLD2Q96PD2 775 aa8.34□□□□□ -1.07
CSDE1-206ENST00000483030 MRPL9Q9BYD2 267 aaKnown RBP8.34□□□□□ -1.07
CSDE1-206ENST00000483030 ZMYND12Q9H0C1 365 aa8.34□□□□□ -1.07
CSDE1-206ENST00000483030 ZBP1Q9H171 429 aa8.34□□□□□ -1.07
CSDE1-206ENST00000483030 C6orf50Q9HD87 102 aa8.34□□□□□ -1.07
CSDE1-206ENST00000483030 DISC1Q9NRI5 854 aa8.34□□□□□ -1.07
CSDE1-206ENST00000483030 DACT1Q9NYF0 836 aa8.34□□□□□ -1.07
CSDE1-206ENST00000483030 PLXNA4Q9HCM2 1894 aa8.34□□□□□ -1.07
CSDE1-206ENST00000483030 ESYT2A0FGR8 921 aa8.33□□□□□ -1.08
CSDE1-206ENST00000483030 CHMP2AO43633 222 aa8.33□□□□□ -1.08
CSDE1-206ENST00000483030 PI15O43692 258 aa8.33□□□□□ -1.08
CSDE1-206ENST00000483030 ZC3H11AO75152 810 aaKnown RBP eCLIP8.33□□□□□ -1.08
CSDE1-206ENST00000483030 CTSAP10619 480 aa8.33□□□□□ -1.08
CSDE1-206ENST00000483030 CD44P16070 742 aaKnown RBP8.33□□□□□ -1.08
CSDE1-206ENST00000483030 CIITAP33076 1130 aa8.33□□□□□ -1.08
CSDE1-206ENST00000483030 CLCN5P51795 746 aa8.33□□□□□ -1.08
CSDE1-206ENST00000483030 IRX6P78412 446 aaPredicted RBP8.33□□□□□ -1.08
CSDE1-206ENST00000483030 FOXK2Q01167 660 aa8.33□□□□□ -1.08
CSDE1-206ENST00000483030 PRKCEQ02156 737 aa8.33□□□□□ -1.08
CSDE1-206ENST00000483030 TBC1D8BQ0IIM8 1120 aa8.33□□□□□ -1.08
CSDE1-206ENST00000483030 DRP2Q13474 957 aa8.33□□□□□ -1.08
CSDE1-206ENST00000483030 UGCGQ16739 394 aa8.33□□□□□ -1.08
CSDE1-206ENST00000483030 ADCK5Q3MIX3 580 aa8.33□□□□□ -1.08
CSDE1-206ENST00000483030 MCTP2Q6DN12 878 aa8.33□□□□□ -1.08
CSDE1-206ENST00000483030 TWF2Q6IBS0 349 aaKnown RBP8.33□□□□□ -1.08
CSDE1-206ENST00000483030 KIAA1841Q6NSI8 718 aa8.33□□□□□ -1.08
CSDE1-206ENST00000483030 FRMD5Q7Z6J6 570 aa8.33□□□□□ -1.08
CSDE1-206ENST00000483030 DDX53Q86TM3 631 aaKnown RBP8.33□□□□□ -1.08
CSDE1-206ENST00000483030 CABP7Q86V35 215 aa8.33□□□□□ -1.08
CSDE1-206ENST00000483030 REXO1Q8N1G1 1221 aaKnown RBP8.33□□□□□ -1.08
CSDE1-206ENST00000483030 FLCNQ8NFG4 579 aa8.33□□□□□ -1.08
CSDE1-206ENST00000483030 SLC22A17Q8WUG5 538 aa8.33□□□□□ -1.08
CSDE1-206ENST00000483030 UBE2Q2Q8WVN8 375 aa8.33□□□□□ -1.08
CSDE1-206ENST00000483030 LPPQ93052 612 aa8.33□□□□□ -1.08
CSDE1-206ENST00000483030 NKD2Q969F2 451 aaPredicted RBP8.33□□□□□ -1.08
CSDE1-206ENST00000483030 LENG9Q96B70 501 aa8.33□□□□□ -1.08
CSDE1-206ENST00000483030 IGSF21Q96ID5 467 aa8.33□□□□□ -1.08
CSDE1-206ENST00000483030 GCOM2Q9BZD3 368 aaPredicted RBP8.33□□□□□ -1.08
CSDE1-206ENST00000483030 NRDE2Q9H7Z3 1164 aa8.33□□□□□ -1.08
CSDE1-206ENST00000483030 CYP26B1Q9NR63 512 aa8.33□□□□□ -1.08
CSDE1-206ENST00000483030 CHST12Q9NRB3 414 aa8.33□□□□□ -1.08
CSDE1-206ENST00000483030 DZANK1Q9NVP4 752 aa8.33□□□□□ -1.08
CSDE1-206ENST00000483030 USTQ9Y2C2 406 aa8.33□□□□□ -1.08
CSDE1-206ENST00000483030 KIAA1671Q9BY89 1806 aa8.33□□□□□ -1.08
CSDE1-206ENST00000483030 USP34Q70CQ2 3546 aa8.32□□□□□ -1.08
CSDE1-206ENST00000483030 A0A087WZ62 844 aa8.32□□□□□ -1.08
CSDE1-206ENST00000483030 MEIS3P2A8K0S8 358 aa8.32□□□□□ -1.08
CSDE1-206ENST00000483030 MSH4O15457 936 aa8.32□□□□□ -1.08
CSDE1-206ENST00000483030 EDIL3O43854 480 aa8.32□□□□□ -1.08
CSDE1-206ENST00000483030 GAS7O60861 476 aa8.32□□□□□ -1.08
CSDE1-206ENST00000483030 GALTP07902 379 aa8.32□□□□□ -1.08
CSDE1-206ENST00000483030 GNA11P29992 359 aa8.32□□□□□ -1.08
CSDE1-206ENST00000483030 PHKA2P46019 1235 aa8.32□□□□□ -1.08
CSDE1-206ENST00000483030 POLGP54098 1239 aaPredicted RBP8.32□□□□□ -1.08
CSDE1-206ENST00000483030 FGD1P98174 961 aa8.32□□□□□ -1.08
CSDE1-206ENST00000483030 RNASELQ05823 741 aaKnown RBP8.32□□□□□ -1.08
CSDE1-206ENST00000483030 GIT2Q14161 759 aa8.32□□□□□ -1.08
CSDE1-206ENST00000483030 TARBP2Q15633 366 aaKnown RBP8.32□□□□□ -1.08
CSDE1-206ENST00000483030 NOMO2Q5JPE7 1267 aa8.32□□□□□ -1.08
CSDE1-206ENST00000483030 GLB1LQ6UWU2 654 aa8.32□□□□□ -1.08
CSDE1-206ENST00000483030 GPR149Q86SP6 731 aa8.32□□□□□ -1.08
CSDE1-206ENST00000483030 CCDC12Q8WUD4 166 aaPredicted RBP8.32□□□□□ -1.08
CSDE1-206ENST00000483030 BCL7CQ8WUZ0 217 aaPredicted RBP8.32□□□□□ -1.08
CSDE1-206ENST00000483030 GJA10Q969M2 543 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms