RNA–Protein interactions for RNA: ENST00000482996.5

VARS-225, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-225ENST00000482996 COG5Q9UP83 839 aa15.48■□□□□ 0.07
VARS-225ENST00000482996 MRPL42Q9Y6G3 142 aaKnown RBP15.48■□□□□ 0.07
VARS-225ENST00000482996 DGAT1O75907 488 aa15.47■□□□□ 0.07
VARS-225ENST00000482996 LINC00271P0C7V0 271 aa15.47■□□□□ 0.07
VARS-225ENST00000482996 SRGAP2CP0DJJ0 459 aa15.47■□□□□ 0.07
VARS-225ENST00000482996 GATMP50440 423 aa15.47■□□□□ 0.07
VARS-225ENST00000482996 LAMTOR4Q0VGL1 99 aa15.47■□□□□ 0.07
VARS-225ENST00000482996 AAK1Q2M2I8 961 aa15.47■□□□□ 0.07
VARS-225ENST00000482996 RALGAPA2Q2PPJ7 1873 aa15.47■□□□□ 0.07
VARS-225ENST00000482996 NAALADL2Q58DX5 795 aa15.47■□□□□ 0.07
VARS-225ENST00000482996 SPOUT1Q5T280 376 aaKnown RBP15.47■□□□□ 0.07
VARS-225ENST00000482996 FAM102BQ5T8I3 360 aa15.47■□□□□ 0.07
VARS-225ENST00000482996 ECHDC2Q86YB7 292 aa15.47■□□□□ 0.07
VARS-225ENST00000482996 ABI1Q8IZP0 508 aa15.47■□□□□ 0.07
VARS-225ENST00000482996 POLR3CQ9BUI4 534 aaPredicted RBP15.47■□□□□ 0.07
VARS-225ENST00000482996 LMAN2LQ9H0V9 348 aa15.47■□□□□ 0.07
VARS-225ENST00000482996 AAASQ9NRG9 546 aa15.47■□□□□ 0.07
VARS-225ENST00000482996 A0A0U1RQF3 1178 aa15.46■□□□□ 0.07
VARS-225ENST00000482996 RARRES1P49788 294 aa15.46■□□□□ 0.07
VARS-225ENST00000482996 MXD4Q14582 209 aaPredicted RBP15.46■□□□□ 0.07
VARS-225ENST00000482996 NBR1Q14596 966 aa15.46■□□□□ 0.07
VARS-225ENST00000482996 HAUS3Q68CZ6 603 aa15.46■□□□□ 0.07
VARS-225ENST00000482996 TWF2Q6IBS0 349 aaKnown RBP15.46■□□□□ 0.07
VARS-225ENST00000482996 SRGAP1Q7Z6B7 1085 aa15.46■□□□□ 0.07
VARS-225ENST00000482996 FERMT3Q86UX7 667 aa15.46■□□□□ 0.07
VARS-225ENST00000482996 RNF169Q8NCN4 708 aa15.46■□□□□ 0.07
VARS-225ENST00000482996 PIGOQ8TEQ8 1089 aa15.46■□□□□ 0.07
VARS-225ENST00000482996 P2RX5Q93086 422 aa15.46■□□□□ 0.07
VARS-225ENST00000482996 HLA-CQ95604 372 aa15.46■□□□□ 0.07
VARS-225ENST00000482996 ASB2Q96Q27 587 aa15.46■□□□□ 0.07
VARS-225ENST00000482996 NACC1Q96RE7 527 aa15.46■□□□□ 0.07
VARS-225ENST00000482996 RAB34Q9BZG1 259 aa15.46■□□□□ 0.07
VARS-225ENST00000482996 TMEM117Q9H0C3 514 aa15.46■□□□□ 0.07
VARS-225ENST00000482996 PIN4Q9Y237 131 aaKnown RBP15.46■□□□□ 0.07
VARS-225ENST00000482996 STK24Q9Y6E0 443 aa15.46■□□□□ 0.07
VARS-225ENST00000482996 BRWD1Q9NSI6 2320 aa15.46■□□□□ 0.07
VARS-225ENST00000482996 NLRC5Q86WI3 1866 aa15.46■□□□□ 0.06
VARS-225ENST00000482996 LAD1O00515 517 aa15.45■□□□□ 0.06
VARS-225ENST00000482996 MED24O75448 989 aa15.45■□□□□ 0.06
VARS-225ENST00000482996 EOMESO95936 686 aa15.45■□□□□ 0.06
VARS-225ENST00000482996 SPATA31C1P0DKV0 1188 aa15.45■□□□□ 0.06
VARS-225ENST00000482996 FGFR1P11362 822 aa15.45■□□□□ 0.06
VARS-225ENST00000482996 SKIP12755 728 aa15.45■□□□□ 0.06
VARS-225ENST00000482996 RPA1P27694 616 aa15.45■□□□□ 0.06
VARS-225ENST00000482996 PHKA2P46019 1235 aa15.45■□□□□ 0.06
VARS-225ENST00000482996 TOB1P50616 345 aaPredicted RBP15.45■□□□□ 0.06
VARS-225ENST00000482996 FXR2P51116 673 aaKnown RBP eCLIP15.45■□□□□ 0.062e-12■■■■■ 30.8
VARS-225ENST00000482996 PTGDRQ13258 359 aa15.45■□□□□ 0.06
VARS-225ENST00000482996 TFDP1Q14186 410 aa15.45■□□□□ 0.06
VARS-225ENST00000482996 RILPL1Q5EBL4 403 aa15.45■□□□□ 0.06
VARS-225ENST00000482996 CATSPER3Q86XQ3 398 aa15.45■□□□□ 0.06
VARS-225ENST00000482996 C4orf32Q8N8J7 132 aa15.45■□□□□ 0.06
VARS-225ENST00000482996 RNF149Q8NC42 400 aa15.45■□□□□ 0.06
VARS-225ENST00000482996 COL25A1Q9BXS0 654 aaPredicted RBP15.45■□□□□ 0.06
VARS-225ENST00000482996 NSUN3Q9H649 340 aaKnown RBP15.45■□□□□ 0.06
VARS-225ENST00000482996 IFT122Q9HBG6 1241 aa15.45■□□□□ 0.06
VARS-225ENST00000482996 XPNPEP1Q9NQW7 623 aa15.45■□□□□ 0.06
VARS-225ENST00000482996 LRWD1Q9UFC0 647 aa15.45■□□□□ 0.06
VARS-225ENST00000482996 DBR1Q9UK59 544 aaKnown RBP15.45■□□□□ 0.06
VARS-225ENST00000482996 PCDHB6Q9Y5E3 794 aa15.45■□□□□ 0.06
VARS-225ENST00000482996 PCDHB12Q9Y5F1 795 aa15.45■□□□□ 0.06
VARS-225ENST00000482996 MYO7AQ13402 2215 aa15.45■□□□□ 0.06
VARS-225ENST00000482996 REV3LO60673 3130 aa15.45■□□□□ 0.06
VARS-225ENST00000482996 NCOR1O75376 2440 aa15.44■□□□□ 0.06
VARS-225ENST00000482996 GRM6O15303 877 aa15.44■□□□□ 0.06
VARS-225ENST00000482996 USO1O60763 962 aaKnown RBP15.44■□□□□ 0.06
VARS-225ENST00000482996 MUTP22033 750 aa15.44■□□□□ 0.06
VARS-225ENST00000482996 RAB27AP51159 221 aa15.44■□□□□ 0.06
VARS-225ENST00000482996 PDIA5Q14554 519 aa15.44■□□□□ 0.06
VARS-225ENST00000482996 CSPP1Q1MSJ5 1256 aa15.44■□□□□ 0.06
VARS-225ENST00000482996 LARP1BQ659C4 914 aaKnown RBP15.44■□□□□ 0.06
VARS-225ENST00000482996 MCPH1Q8NEM0 835 aa15.44■□□□□ 0.06
VARS-225ENST00000482996 TRAIPQ9BWF2 469 aa15.44■□□□□ 0.06
VARS-225ENST00000482996 AGPAT5Q9NUQ2 364 aa15.44■□□□□ 0.06
VARS-225ENST00000482996 PLAGL2Q9UPG8 496 aa15.44■□□□□ 0.06
VARS-225ENST00000482996 A0A087WWV3 80 aa15.43■□□□□ 0.06
VARS-225ENST00000482996 ARHGEF35A5YM69 484 aa15.43■□□□□ 0.06
VARS-225ENST00000482996 LAG3P18627 525 aa15.43■□□□□ 0.06
VARS-225ENST00000482996 CCT6AP40227 531 aaKnown RBP15.43■□□□□ 0.06
VARS-225ENST00000482996 TFF2Q03403 129 aa15.43■□□□□ 0.06
VARS-225ENST00000482996 POU5F1BQ06416 359 aa15.43■□□□□ 0.06
VARS-225ENST00000482996 NCBP1Q09161 790 aaKnown RBP15.43■□□□□ 0.06
VARS-225ENST00000482996 PCBP1Q15365 356 aaKnown RBP eCLIP15.43■□□□□ 0.066e-7■■■■□ 21.8
VARS-225ENST00000482996 POTEGQ6S5H5 508 aa15.43■□□□□ 0.06
VARS-225ENST00000482996 DTHD1Q6ZMT9 781 aa15.43■□□□□ 0.06
VARS-225ENST00000482996 ZNF598Q86UK7 904 aaKnown RBP15.43■□□□□ 0.06
VARS-225ENST00000482996 LRRC43Q8N309 656 aa15.43■□□□□ 0.06
VARS-225ENST00000482996 KLHL23Q8NBE8 558 aa15.43■□□□□ 0.06
VARS-225ENST00000482996 RSPH1Q8WYR4 309 aa15.43■□□□□ 0.06
VARS-225ENST00000482996 CASD1Q96PB1 797 aa15.43■□□□□ 0.06
VARS-225ENST00000482996 ALG13Q9NP73 1137 aaKnown RBP15.43■□□□□ 0.06
VARS-225ENST00000482996 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.43■□□□□ 0.06
VARS-225ENST00000482996 TYW1Q9NV66 732 aaKnown RBP15.43■□□□□ 0.06
VARS-225ENST00000482996 ARID2Q68CP9 1835 aa15.43■□□□□ 0.06
VARS-225ENST00000482996 ERLIN2O94905 339 aa15.42■□□□□ 0.06
VARS-225ENST00000482996 ITGB1P05556 798 aa15.42■□□□□ 0.06
VARS-225ENST00000482996 ARL2P36404 184 aa15.42■□□□□ 0.06
VARS-225ENST00000482996 PRPHP41219 470 aa15.42■□□□□ 0.06
VARS-225ENST00000482996 PTENP60484 403 aa15.42■□□□□ 0.06
VARS-225ENST00000482996 CUL4AQ13619 759 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms