RNA–Protein interactions for RNA: ENST00000482590.1

CLK1-212, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-212ENST00000482590 MCM4P33991 863 aa7.98□□□□□ -1.13
CLK1-212ENST00000482590 GMPSP49915 693 aaPredicted RBP7.98□□□□□ -1.13
CLK1-212ENST00000482590 LBX1P52954 281 aa7.98□□□□□ -1.13
CLK1-212ENST00000482590 MVKQ03426 396 aa7.98□□□□□ -1.13
CLK1-212ENST00000482590 CXCL9Q07325 125 aa7.98□□□□□ -1.13
CLK1-212ENST00000482590 APOBRQ0VD83 1088 aa7.98□□□□□ -1.13
CLK1-212ENST00000482590 RAB33AQ14088 237 aa7.98□□□□□ -1.13
CLK1-212ENST00000482590 TNIP1Q15025 636 aa7.98□□□□□ -1.13
CLK1-212ENST00000482590 ANKS3Q6ZW76 656 aa7.98□□□□□ -1.13
CLK1-212ENST00000482590 PCGF5Q86SE9 256 aa7.98□□□□□ -1.13
CLK1-212ENST00000482590 GGNQ86UU5 652 aa7.98□□□□□ -1.13
CLK1-212ENST00000482590 CNPY4Q8N129 248 aa7.98□□□□□ -1.13
CLK1-212ENST00000482590 PLBD2Q8NHP8 589 aa7.98□□□□□ -1.13
CLK1-212ENST00000482590 TSR2Q969E8 191 aaKnown RBP7.98□□□□□ -1.13
CLK1-212ENST00000482590 CAPNS2Q96L46 248 aa7.98□□□□□ -1.13
CLK1-212ENST00000482590 RTFDC1Q9BY42 306 aaPredicted RBP7.98□□□□□ -1.13
CLK1-212ENST00000482590 TRIM55Q9BYV6 548 aa7.98□□□□□ -1.13
CLK1-212ENST00000482590 KANSL2Q9H9L4 492 aa7.98□□□□□ -1.13
CLK1-212ENST00000482590 DBF4Q9UBU7 674 aaPredicted RBP7.98□□□□□ -1.13
CLK1-212ENST00000482590 ZC3H12DA2A288 527 aaKnown RBP7.97□□□□□ -1.13
CLK1-212ENST00000482590 CHL1O00533 1208 aa7.97□□□□□ -1.13
CLK1-212ENST00000482590 FFAR3O14843 346 aa7.97□□□□□ -1.13
CLK1-212ENST00000482590 SHOXO15266 292 aa7.97□□□□□ -1.13
CLK1-212ENST00000482590 RAD17O75943 681 aa7.97□□□□□ -1.13
CLK1-212ENST00000482590 HSPA8P11142 646 aaKnown RBP7.97□□□□□ -1.13
CLK1-212ENST00000482590 ZEB1P37275 1124 aaPredicted RBP7.97□□□□□ -1.13
CLK1-212ENST00000482590 MAPKAPK2P49137 400 aa7.97□□□□□ -1.13
CLK1-212ENST00000482590 ZNF165P49910 485 aa7.97□□□□□ -1.13
CLK1-212ENST00000482590 DDX10Q13206 875 aaKnown RBP7.97□□□□□ -1.13
CLK1-212ENST00000482590 KRT24Q2M2I5 525 aa7.97□□□□□ -1.13
CLK1-212ENST00000482590 LRRFIP1Q32MZ4 808 aaKnown RBP7.97□□□□□ -1.13
CLK1-212ENST00000482590 ERICH6BQ5W0A0 696 aa7.97□□□□□ -1.13
CLK1-212ENST00000482590 CYP4F22Q6NT55 531 aa7.97□□□□□ -1.13
CLK1-212ENST00000482590 FRMD5Q7Z6J6 570 aa7.97□□□□□ -1.13
CLK1-212ENST00000482590 RAVER1Q8IY67 606 aaKnown RBP7.97□□□□□ -1.13
CLK1-212ENST00000482590 ESYT3A0FGR9 886 aa7.96□□□□□ -1.14
CLK1-212ENST00000482590 H7C1D1 291 aa7.96□□□□□ -1.14
CLK1-212ENST00000482590 TRAF5O00463 557 aa7.96□□□□□ -1.14
CLK1-212ENST00000482590 CELF2O95319 508 aaKnown RBP7.96□□□□□ -1.14
CLK1-212ENST00000482590 FGAP02671 866 aa7.96□□□□□ -1.14
CLK1-212ENST00000482590 GSNP06396 782 aa7.96□□□□□ -1.14
CLK1-212ENST00000482590 LIMS1P48059 325 aa7.96□□□□□ -1.14
CLK1-212ENST00000482590 ZNF200P98182 395 aaPredicted RBP7.96□□□□□ -1.14
CLK1-212ENST00000482590 NR1I3Q14994 352 aa7.96□□□□□ -1.14
CLK1-212ENST00000482590 ZRSR2Q15696 482 aaKnown RBP7.96□□□□□ -1.14
CLK1-212ENST00000482590 NFE2Q16621 373 aaPredicted RBP7.96□□□□□ -1.14
CLK1-212ENST00000482590 ZC3H14Q6PJT7 736 aaKnown RBP7.96□□□□□ -1.14
CLK1-212ENST00000482590 KRT26Q7Z3Y9 468 aa7.96□□□□□ -1.14
CLK1-212ENST00000482590 WDR75Q8IWA0 830 aaKnown RBP7.96□□□□□ -1.14
CLK1-212ENST00000482590 EAF1Q96JC9 268 aaPredicted RBP7.96□□□□□ -1.14
CLK1-212ENST00000482590 EYA3Q99504 573 aa7.96□□□□□ -1.14
CLK1-212ENST00000482590 NAP1L4Q99733 375 aaKnown RBP7.96□□□□□ -1.14
CLK1-212ENST00000482590 SLC12A9Q9BXP2 914 aa7.96□□□□□ -1.14
CLK1-212ENST00000482590 GLIS2Q9BZE0 524 aaPredicted RBP7.96□□□□□ -1.14
CLK1-212ENST00000482590 HYPKQ9NX55 129 aa7.96□□□□□ -1.14
CLK1-212ENST00000482590 SUCOQ9UBS9 1254 aaKnown RBP7.96□□□□□ -1.14
CLK1-212ENST00000482590 C9IYK1 514 aa7.95□□□□□ -1.14
CLK1-212ENST00000482590 GSTM1P09488 218 aa7.95□□□□□ -1.14
CLK1-212ENST00000482590 CAP1Q01518 475 aa7.95□□□□□ -1.14
CLK1-212ENST00000482590 CALD1Q05682 793 aaKnown RBP7.95□□□□□ -1.14
CLK1-212ENST00000482590 POU5F1BQ06416 359 aa7.95□□□□□ -1.14
CLK1-212ENST00000482590 BRDTQ58F21 947 aaPredicted RBP7.95□□□□□ -1.14
CLK1-212ENST00000482590 SLITRK4Q8IW52 837 aa7.95□□□□□ -1.14
CLK1-212ENST00000482590 C7orf61Q8IZ16 206 aa7.95□□□□□ -1.14
CLK1-212ENST00000482590 LILRB2Q8N423 598 aa7.95□□□□□ -1.14
CLK1-212ENST00000482590 CELF1Q92879 486 aaKnown RBP7.95□□□□□ -1.14
CLK1-212ENST00000482590 FAM89AQ96GI7 184 aa7.95□□□□□ -1.14
CLK1-212ENST00000482590 GPR101Q96P66 508 aaPredicted RBP7.95□□□□□ -1.14
CLK1-212ENST00000482590 MPHOSPH6Q99547 160 aaKnown RBP7.95□□□□□ -1.14
CLK1-212ENST00000482590 FEZ1Q99689 392 aa7.95□□□□□ -1.14
CLK1-212ENST00000482590 ISCA1Q9BUE6 129 aa7.95□□□□□ -1.14
CLK1-212ENST00000482590 DSCC1Q9BVC3 393 aa7.95□□□□□ -1.14
CLK1-212ENST00000482590 DBNDD1Q9H9R9 158 aa7.95□□□□□ -1.14
CLK1-212ENST00000482590 TMEM260Q9NX78 707 aa7.95□□□□□ -1.14
CLK1-212ENST00000482590 CNOT7Q9UIV1 285 aaKnown RBP7.95□□□□□ -1.14
CLK1-212ENST00000482590 PAPPA2Q9BXP8 1791 aa7.94□□□□□ -1.14
CLK1-212ENST00000482590 FAM86C2PA6NEL3 165 aa7.94□□□□□ -1.14
CLK1-212ENST00000482590 YDJCA8MPS7 323 aa7.94□□□□□ -1.14
CLK1-212ENST00000482590 CCER2I3L3R5 266 aa7.94□□□□□ -1.14
CLK1-212ENST00000482590 TSPAN6O43657 245 aa7.94□□□□□ -1.14
CLK1-212ENST00000482590 ECE2O60344 883 aa7.94□□□□□ -1.14
CLK1-212ENST00000482590 KRT18P05783 430 aaKnown RBP7.94□□□□□ -1.14
CLK1-212ENST00000482590 ADRB1P08588 477 aa7.94□□□□□ -1.14
CLK1-212ENST00000482590 ACRP10323 421 aa7.94□□□□□ -1.14
CLK1-212ENST00000482590 CD53P19397 219 aa7.94□□□□□ -1.14
CLK1-212ENST00000482590 ETFBP38117 255 aa7.94□□□□□ -1.14
CLK1-212ENST00000482590 SLURP1P55000 103 aa7.94□□□□□ -1.14
CLK1-212ENST00000482590 GNAI1P63096 354 aa7.94□□□□□ -1.14
CLK1-212ENST00000482590 HLTFQ14527 1009 aaKnown RBP eCLIP7.94□□□□□ -1.14
CLK1-212ENST00000482590 SF3B3Q15393 1217 aaKnown RBP7.94□□□□□ -1.14
CLK1-212ENST00000482590 C16orf86Q6ZW13 317 aa7.94□□□□□ -1.14
CLK1-212ENST00000482590 SAPCD2Q86UD0 394 aa7.94□□□□□ -1.14
CLK1-212ENST00000482590 NKD1Q969G9 470 aa7.94□□□□□ -1.14
CLK1-212ENST00000482590 ZNF700Q9H0M5 742 aa7.94□□□□□ -1.14
CLK1-212ENST00000482590 ARNT2Q9HBZ2 717 aa7.94□□□□□ -1.14
CLK1-212ENST00000482590 PLA2G2DQ9UNK4 145 aa7.94□□□□□ -1.14
CLK1-212ENST00000482590 HCFC2Q9Y5Z7 792 aa7.94□□□□□ -1.14
CLK1-212ENST00000482590 ARAP2Q8WZ64 1704 aa7.94□□□□□ -1.14
CLK1-212ENST00000482590 MYH13Q9UKX3 1938 aa7.93□□□□□ -1.14
CLK1-212ENST00000482590 PSMD14O00487 310 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms