RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 ERCC4Q92889 916 aaPredicted RBP12.81□□□□□ -0.36
HPS4-212ENST00000481910 DNAJC19Q96DA6 116 aa12.81□□□□□ -0.36
HPS4-212ENST00000481910 DRC1Q96MC2 740 aa12.81□□□□□ -0.36
HPS4-212ENST00000481910 FAM49AQ9H0Q0 323 aaPredicted RBP12.81□□□□□ -0.36
HPS4-212ENST00000481910 CLSTN2Q9H4D0 955 aa12.81□□□□□ -0.36
HPS4-212ENST00000481910 ODF2LQ9ULJ1 636 aa12.81□□□□□ -0.36
HPS4-212ENST00000481910 CEP83Q9Y592 693 aa12.81□□□□□ -0.36
HPS4-212ENST00000481910 DCDC2CA8MYV0 355 aa12.8□□□□□ -0.36
HPS4-212ENST00000481910 RSPH10B2B2RC85 870 aa12.8□□□□□ -0.36
HPS4-212ENST00000481910 PQBP1O60828 265 aaKnown RBP12.8□□□□□ -0.36
HPS4-212ENST00000481910 TBCAO75347 108 aaKnown RBP12.8□□□□□ -0.36
HPS4-212ENST00000481910 RSPH10BP0C881 870 aa12.8□□□□□ -0.36
HPS4-212ENST00000481910 DPYDQ12882 1025 aa12.8□□□□□ -0.36
HPS4-212ENST00000481910 SERINC5Q86VE9 423 aa12.8□□□□□ -0.36
HPS4-212ENST00000481910 KIAA0319LQ8IZA0 1049 aa12.8□□□□□ -0.36
HPS4-212ENST00000481910 PSPC1Q8WXF1 523 aaKnown RBP12.8□□□□□ -0.36
HPS4-212ENST00000481910 KIFAP3Q92845 792 aa12.8□□□□□ -0.36
HPS4-212ENST00000481910 CTAGE1Q96RT6 745 aa12.8□□□□□ -0.36
HPS4-212ENST00000481910 POLR3FQ9H1D9 316 aaPredicted RBP12.8□□□□□ -0.36
HPS4-212ENST00000481910 PANK4Q9NVE7 773 aa12.8□□□□□ -0.36
HPS4-212ENST00000481910 SUCLA2Q9P2R7 463 aaPredicted RBP12.8□□□□□ -0.36
HPS4-212ENST00000481910 AKT3Q9Y243 479 aa12.8□□□□□ -0.36
HPS4-212ENST00000481910 ESPNB1AK53 854 aa12.8□□□□□ -0.36
HPS4-212ENST00000481910 TLR3O15455 904 aaKnown RBP12.8□□□□□ -0.36
HPS4-212ENST00000481910 FAM13AO94988 1023 aa12.8□□□□□ -0.36
HPS4-212ENST00000481910 ARL2P36404 184 aa12.8□□□□□ -0.36
HPS4-212ENST00000481910 PTK7Q13308 1070 aa12.8□□□□□ -0.36
HPS4-212ENST00000481910 SNX17Q15036 470 aa12.8□□□□□ -0.36
HPS4-212ENST00000481910 TRIM60Q495X7 471 aa12.8□□□□□ -0.36
HPS4-212ENST00000481910 CAVIN1Q6NZI2 390 aaKnown RBP12.8□□□□□ -0.36
HPS4-212ENST00000481910 CNNM4Q6P4Q7 775 aa12.8□□□□□ -0.36
HPS4-212ENST00000481910 ANKRD33Q7Z3H0 272 aa12.8□□□□□ -0.36
HPS4-212ENST00000481910 UBE2Q1Q7Z7E8 422 aa12.8□□□□□ -0.36
HPS4-212ENST00000481910 RHPN2Q8IUC4 686 aa12.8□□□□□ -0.36
HPS4-212ENST00000481910 LINC01465Q8N7H1 131 aa12.8□□□□□ -0.36
HPS4-212ENST00000481910 PRPF31Q8WWY3 499 aaKnown RBP12.8□□□□□ -0.36
HPS4-212ENST00000481910 TOX2Q96NM4 488 aa12.8□□□□□ -0.36
HPS4-212ENST00000481910 ATP11BQ9Y2G3 1177 aa12.8□□□□□ -0.36
HPS4-212ENST00000481910 COL4A3BPQ9Y5P4 624 aa12.8□□□□□ -0.36
HPS4-212ENST00000481910 PVALEFA0A1B0GWK0 134 aa12.79□□□□□ -0.36
HPS4-212ENST00000481910 ZMYND10O75800 440 aa12.79□□□□□ -0.36
HPS4-212ENST00000481910 SMC2O95347 1197 aa12.79□□□□□ -0.36
HPS4-212ENST00000481910 CD4P01730 458 aa12.79□□□□□ -0.36
HPS4-212ENST00000481910 VTNP04004 478 aa12.79□□□□□ -0.36
HPS4-212ENST00000481910 RTP1P59025 263 aa12.79□□□□□ -0.36
HPS4-212ENST00000481910 TLE2Q04725 743 aa12.79□□□□□ -0.36
HPS4-212ENST00000481910 MAPK7Q13164 816 aa12.79□□□□□ -0.36
HPS4-212ENST00000481910 MXD4Q14582 209 aaPredicted RBP12.79□□□□□ -0.36
HPS4-212ENST00000481910 LRRC26Q2I0M4 334 aa12.79□□□□□ -0.36
HPS4-212ENST00000481910 RSPH3Q86UC2 560 aa12.79□□□□□ -0.36
HPS4-212ENST00000481910 CCDC65Q8IXS2 484 aa12.79□□□□□ -0.36
HPS4-212ENST00000481910 DAW1Q8N136 415 aa12.79□□□□□ -0.36
HPS4-212ENST00000481910 NME8Q8N427 588 aa12.79□□□□□ -0.36
HPS4-212ENST00000481910 MYCT1Q8N699 235 aa12.79□□□□□ -0.36
HPS4-212ENST00000481910 SYAP1Q96A49 352 aaPredicted RBP12.79□□□□□ -0.36
HPS4-212ENST00000481910 C17orf75Q9HAS0 396 aa12.79□□□□□ -0.36
HPS4-212ENST00000481910 PARVGQ9HBI0 331 aa12.79□□□□□ -0.36
HPS4-212ENST00000481910 TMEM63CQ9P1W3 806 aa12.79□□□□□ -0.36
HPS4-212ENST00000481910 LARSQ9P2J5 1176 aaKnown RBP12.79□□□□□ -0.36
HPS4-212ENST00000481910 PCDHA5Q9Y5H7 936 aa12.79□□□□□ -0.36
HPS4-212ENST00000481910 ASAP2O43150 1006 aa12.78□□□□□ -0.36
HPS4-212ENST00000481910 RPN1P04843 607 aaKnown RBP12.78□□□□□ -0.36
HPS4-212ENST00000481910 TMEM62Q0P6H9 643 aa12.78□□□□□ -0.36
HPS4-212ENST00000481910 LAMTOR4Q0VGL1 99 aa12.78□□□□□ -0.36
HPS4-212ENST00000481910 HERC4Q5GLZ8 1057 aaPredicted RBP12.78□□□□□ -0.36
HPS4-212ENST00000481910 ODR4Q5SWX8 454 aa12.78□□□□□ -0.36
HPS4-212ENST00000481910 CCDC183Q5T5S1 534 aa12.78□□□□□ -0.36
HPS4-212ENST00000481910 UNC13DQ70J99 1090 aa12.78□□□□□ -0.36
HPS4-212ENST00000481910 KSR1Q8IVT5 923 aa12.78□□□□□ -0.36
HPS4-212ENST00000481910 WNT8BQ93098 351 aa12.78□□□□□ -0.36
HPS4-212ENST00000481910 SMARCE1Q969G3 411 aa12.78□□□□□ -0.36
HPS4-212ENST00000481910 IFT74Q96LB3 600 aa12.78□□□□□ -0.36
HPS4-212ENST00000481910 PPP1R16BQ96T49 567 aa12.78□□□□□ -0.36
HPS4-212ENST00000481910 KLRC4O43908 158 aa12.78□□□□□ -0.36
HPS4-212ENST00000481910 RPLP2P05387 115 aaKnown RBP12.78□□□□□ -0.36
HPS4-212ENST00000481910 SRGAP2CP0DJJ0 459 aa12.78□□□□□ -0.36
HPS4-212ENST00000481910 PLS3P13797 630 aa12.78□□□□□ -0.36
HPS4-212ENST00000481910 GLRA2P23416 452 aa12.78□□□□□ -0.36
HPS4-212ENST00000481910 CALRP27797 417 aaKnown RBP12.78□□□□□ -0.36
HPS4-212ENST00000481910 THPOP40225 353 aa12.78□□□□□ -0.36
HPS4-212ENST00000481910 ZNF131P52739 623 aa12.78□□□□□ -0.36
HPS4-212ENST00000481910 PEX3P56589 373 aa12.78□□□□□ -0.36
HPS4-212ENST00000481910 NLRP11P59045 1033 aaKnown RBP12.78□□□□□ -0.36
HPS4-212ENST00000481910 FAAP100Q0VG06 881 aa12.78□□□□□ -0.36
HPS4-212ENST00000481910 DMP1Q13316 513 aaPredicted RBP12.78□□□□□ -0.36
HPS4-212ENST00000481910 PPP2R5AQ15172 486 aa12.78□□□□□ -0.36
HPS4-212ENST00000481910 KMT5BQ4FZB7 885 aa12.78□□□□□ -0.36
HPS4-212ENST00000481910 RNF149Q8NC42 400 aa12.78□□□□□ -0.36
HPS4-212ENST00000481910 ASAP3Q8TDY4 903 aa12.78□□□□□ -0.36
HPS4-212ENST00000481910 BSNDQ8WZ55 320 aa12.78□□□□□ -0.36
HPS4-212ENST00000481910 CCDC47Q96A33 483 aaKnown RBP12.78□□□□□ -0.36
HPS4-212ENST00000481910 ZNF668Q96K58 619 aaPredicted RBP12.78□□□□□ -0.36
HPS4-212ENST00000481910 NLRP4Q96MN2 994 aa12.78□□□□□ -0.36
HPS4-212ENST00000481910 GSDMAQ96QA5 445 aa12.78□□□□□ -0.36
HPS4-212ENST00000481910 GINS2Q9Y248 185 aa12.78□□□□□ -0.36
HPS4-212ENST00000481910 FRMD3A2A2Y4 597 aa12.77□□□□□ -0.37
HPS4-212ENST00000481910 CCDC169A6NNP5 214 aa12.77□□□□□ -0.37
HPS4-212ENST00000481910 M0QZ92 97 aa12.77□□□□□ -0.37
HPS4-212ENST00000481910 GAP43P17677 238 aa12.77□□□□□ -0.37
HPS4-212ENST00000481910 SMTNP53814 917 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms