RNA–Protein interactions for RNA: ENST00000481875.1

GARNL3-217, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 639 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-217ENST00000481875 PUF60Q9UHX1 559 aaKnown RBP13.02□□□□□ -0.33
GARNL3-217ENST00000481875 MUTYHQ9UIF7 546 aa13.02□□□□□ -0.33
GARNL3-217ENST00000481875 USP15Q9Y4E8 981 aaPredicted RBP13.02□□□□□ -0.33
GARNL3-217ENST00000481875 IGKV6-21A0A0C4DH24 114 aa13.01□□□□□ -0.33
GARNL3-217ENST00000481875 PSMD10O75832 226 aa13.01□□□□□ -0.33
GARNL3-217ENST00000481875 LARGE1O95461 756 aa13.01□□□□□ -0.33
GARNL3-217ENST00000481875 OATP04181 439 aa13.01□□□□□ -0.33
GARNL3-217ENST00000481875 DARSP14868 501 aaKnown RBP13.01□□□□□ -0.33
GARNL3-217ENST00000481875 ZSCAN20P17040 1043 aaPredicted RBP13.01□□□□□ -0.33
GARNL3-217ENST00000481875 HOXB8P17481 243 aaPredicted RBP13.01□□□□□ -0.33
GARNL3-217ENST00000481875 AKAP17AQ02040 695 aaKnown RBP13.01□□□□□ -0.33
GARNL3-217ENST00000481875 PDAP1Q13442 181 aaKnown RBP13.01□□□□□ -0.33
GARNL3-217ENST00000481875 MOXD1Q6UVY6 613 aa13.01□□□□□ -0.33
GARNL3-217ENST00000481875 TRIM67Q6ZTA4 783 aa13.01□□□□□ -0.33
GARNL3-217ENST00000481875 ECHDC2Q86YB7 292 aa13.01□□□□□ -0.33
GARNL3-217ENST00000481875 THNSL1Q8IYQ7 743 aa13.01□□□□□ -0.33
GARNL3-217ENST00000481875 LRRC43Q8N309 656 aa13.01□□□□□ -0.33
GARNL3-217ENST00000481875 VN1R2Q8NFZ6 395 aa13.01□□□□□ -0.33
GARNL3-217ENST00000481875 TMX3Q96JJ7 454 aa13.01□□□□□ -0.33
GARNL3-217ENST00000481875 MBOAT7Q96N66 472 aa13.01□□□□□ -0.33
GARNL3-217ENST00000481875 CEP89Q96ST8 783 aa13.01□□□□□ -0.33
GARNL3-217ENST00000481875 PRRX2Q99811 253 aa13.01□□□□□ -0.33
GARNL3-217ENST00000481875 BARX2Q9UMQ3 279 aaPredicted RBP13.01□□□□□ -0.33
GARNL3-217ENST00000481875 M0R2N6 131 aa13□□□□□ -0.33
GARNL3-217ENST00000481875 PPFIA3O75145 1194 aa13□□□□□ -0.33
GARNL3-217ENST00000481875 SRGAP2BP0DMP2 458 aa13□□□□□ -0.33
GARNL3-217ENST00000481875 FGFR1P11362 822 aa13□□□□□ -0.33
GARNL3-217ENST00000481875 GPC3P51654 580 aa13□□□□□ -0.33
GARNL3-217ENST00000481875 CLCN3P51790 818 aa13□□□□□ -0.33
GARNL3-217ENST00000481875 ZXDAP98168 799 aa13□□□□□ -0.33
GARNL3-217ENST00000481875 NHLH1Q02575 133 aa13□□□□□ -0.33
GARNL3-217ENST00000481875 KRT17Q04695 432 aa13□□□□□ -0.33
GARNL3-217ENST00000481875 SCRN1Q12765 414 aa13□□□□□ -0.33
GARNL3-217ENST00000481875 GALNT17Q6IS24 598 aa13□□□□□ -0.33
GARNL3-217ENST00000481875 KCNT2Q6UVM3 1135 aa13□□□□□ -0.33
GARNL3-217ENST00000481875 RBM23Q86U06 439 aaKnown RBP13□□□□□ -0.33
GARNL3-217ENST00000481875 CCDC83Q8IWF9 413 aa13□□□□□ -0.33
GARNL3-217ENST00000481875 MICAL1Q8TDZ2 1067 aa13□□□□□ -0.33
GARNL3-217ENST00000481875 PHKBQ93100 1093 aa13□□□□□ -0.33
GARNL3-217ENST00000481875 FBXL18Q96ME1 805 aa13□□□□□ -0.33
GARNL3-217ENST00000481875 DACT1Q9NYF0 836 aa13□□□□□ -0.33
GARNL3-217ENST00000481875 SAMM50Q9Y512 469 aa13□□□□□ -0.33
GARNL3-217ENST00000481875 K7ELQ4 463 aaPredicted RBP12.99□□□□□ -0.33
GARNL3-217ENST00000481875 GAS7O60861 476 aa12.99□□□□□ -0.33
GARNL3-217ENST00000481875 CDKL5O76039 1030 aa12.99□□□□□ -0.33
GARNL3-217ENST00000481875 STBD1O95210 358 aa12.99□□□□□ -0.33
GARNL3-217ENST00000481875 ANP32AP39687 249 aaKnown RBP12.99□□□□□ -0.33
GARNL3-217ENST00000481875 PRKCEQ02156 737 aa12.99□□□□□ -0.33
GARNL3-217ENST00000481875 BECN1Q14457 450 aa12.99□□□□□ -0.33
GARNL3-217ENST00000481875 XKR3Q5GH77 459 aa12.99□□□□□ -0.33
GARNL3-217ENST00000481875 SPOUT1Q5T280 376 aaKnown RBP12.99□□□□□ -0.33
GARNL3-217ENST00000481875 ANKRD54Q6NXT1 300 aa12.99□□□□□ -0.33
GARNL3-217ENST00000481875 MRPL43Q8N983 215 aaKnown RBP12.99□□□□□ -0.33
GARNL3-217ENST00000481875 DAGLBQ8NCG7 672 aa12.99□□□□□ -0.33
GARNL3-217ENST00000481875 GTF3C6Q969F1 213 aa12.99□□□□□ -0.33
GARNL3-217ENST00000481875 ZNF558Q96NG5 402 aa12.99□□□□□ -0.33
GARNL3-217ENST00000481875 UIMC1Q96RL1 719 aa12.99□□□□□ -0.33
GARNL3-217ENST00000481875 SPG21Q9NZD8 308 aa12.99□□□□□ -0.33
GARNL3-217ENST00000481875 AKT3Q9Y243 479 aa12.99□□□□□ -0.33
GARNL3-217ENST00000481875 PCDHGC5Q9Y5F6 944 aa12.99□□□□□ -0.33
GARNL3-217ENST00000481875 IRAK3Q9Y616 596 aa12.99□□□□□ -0.33
GARNL3-217ENST00000481875 KMT2EQ8IZD2 1858 aa12.98□□□□□ -0.33
GARNL3-217ENST00000481875 PER2O15055 1255 aa12.98□□□□□ -0.33
GARNL3-217ENST00000481875 ZNF623O75123 536 aa12.98□□□□□ -0.33
GARNL3-217ENST00000481875 SSRP1Q08945 709 aaKnown RBP12.98□□□□□ -0.33
GARNL3-217ENST00000481875 SIGLEC14Q08ET2 396 aa12.98□□□□□ -0.33
GARNL3-217ENST00000481875 TBC1D8BQ0IIM8 1120 aa12.98□□□□□ -0.33
GARNL3-217ENST00000481875 CLLU1OSQ5K130 101 aa12.98□□□□□ -0.33
GARNL3-217ENST00000481875 LRCH2Q5VUJ6 765 aa12.98□□□□□ -0.33
GARNL3-217ENST00000481875 SYCE2Q6PIF2 218 aa12.98□□□□□ -0.33
GARNL3-217ENST00000481875 ZNF410Q86VK4 478 aa12.98□□□□□ -0.33
GARNL3-217ENST00000481875 TRIM22Q8IYM9 498 aa12.98□□□□□ -0.33
GARNL3-217ENST00000481875 ABI1Q8IZP0 508 aa12.98□□□□□ -0.33
GARNL3-217ENST00000481875 SLC39A11Q8N1S5 342 aa12.98□□□□□ -0.33
GARNL3-217ENST00000481875 LRRC71Q8N4P6 559 aa12.98□□□□□ -0.33
GARNL3-217ENST00000481875 TCF25Q9BQ70 676 aa12.98□□□□□ -0.33
GARNL3-217ENST00000481875 TEKT3Q9BXF9 490 aa12.98□□□□□ -0.33
GARNL3-217ENST00000481875 MRPL9Q9BYD2 267 aaKnown RBP12.98□□□□□ -0.33
GARNL3-217ENST00000481875 UNC45AQ9H3U1 944 aa12.98□□□□□ -0.33
GARNL3-217ENST00000481875 VPS54Q9P1Q0 977 aa12.98□□□□□ -0.33
GARNL3-217ENST00000481875 HCSTQ9UBK5 93 aa12.98□□□□□ -0.33
GARNL3-217ENST00000481875 PCDHA4Q9UN74 947 aa12.98□□□□□ -0.33
GARNL3-217ENST00000481875 PPME1Q9Y570 386 aa12.98□□□□□ -0.33
GARNL3-217ENST00000481875 TMEM221A6NGB7 291 aa12.97□□□□□ -0.33
GARNL3-217ENST00000481875 M0R296 226 aa12.97□□□□□ -0.33
GARNL3-217ENST00000481875 MAFO75444 373 aaPredicted RBP12.97□□□□□ -0.33
GARNL3-217ENST00000481875 DEXIO95424 95 aa12.97□□□□□ -0.33
GARNL3-217ENST00000481875 HSP90AA1P07900 732 aaKnown RBP12.97□□□□□ -0.33
GARNL3-217ENST00000481875 SKIP12755 728 aa12.97□□□□□ -0.33
GARNL3-217ENST00000481875 DNM2P50570 870 aa12.97□□□□□ -0.33
GARNL3-217ENST00000481875 ITIH3Q06033 890 aa12.97□□□□□ -0.33
GARNL3-217ENST00000481875 NPY5RQ15761 445 aa12.97□□□□□ -0.33
GARNL3-217ENST00000481875 UGCGQ16739 394 aa12.97□□□□□ -0.33
GARNL3-217ENST00000481875 PIP4P2Q8N4L2 257 aa12.97□□□□□ -0.33
GARNL3-217ENST00000481875 ZNF579Q8NAF0 562 aaKnown RBP12.97□□□□□ -0.33
GARNL3-217ENST00000481875 ETNPPLQ8TBG4 499 aa12.97□□□□□ -0.33
GARNL3-217ENST00000481875 TBCKQ8TEA7 893 aa12.97□□□□□ -0.33
GARNL3-217ENST00000481875 SLC26A6Q9BXS9 759 aa12.97□□□□□ -0.33
GARNL3-217ENST00000481875 GCOM2Q9BZD3 368 aaPredicted RBP12.97□□□□□ -0.33
GARNL3-217ENST00000481875 INO80BQ9C086 356 aaPredicted RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms