RNA–Protein interactions for RNA: ENST00000481849.5

HLA-B-253, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-253ENST00000481849 APOBRQ0VD83 1088 aa10.24□□□□□ -0.77
HLA-B-253ENST00000481849 PLCB4Q15147 1175 aa10.24□□□□□ -0.77
HLA-B-253ENST00000481849 NR6A1Q15406 480 aa10.24□□□□□ -0.77
HLA-B-253ENST00000481849 CEP55Q53EZ4 464 aa10.24□□□□□ -0.77
HLA-B-253ENST00000481849 TCEAL5Q5H9L2 206 aa10.24□□□□□ -0.77
HLA-B-253ENST00000481849 PPP1R26Q5T8A7 1209 aaPredicted RBP10.24□□□□□ -0.77
HLA-B-253ENST00000481849 BANK1Q8NDB2 785 aa10.24□□□□□ -0.77
HLA-B-253ENST00000481849 JAKMIP1Q96N16 626 aaKnown RBP10.24□□□□□ -0.77
HLA-B-253ENST00000481849 SAMD11Q96NU1 681 aa10.24□□□□□ -0.77
HLA-B-253ENST00000481849 AGO3Q9H9G7 860 aaKnown RBP10.24□□□□□ -0.77
HLA-B-253ENST00000481849 BARHL2Q9NY43 387 aa10.24□□□□□ -0.77
HLA-B-253ENST00000481849 GINS2Q9Y248 185 aa10.24□□□□□ -0.77
HLA-B-253ENST00000481849 MYH6P13533 1939 aa10.24□□□□□ -0.77
HLA-B-253ENST00000481849 PTPRSQ13332 1948 aa10.23□□□□□ -0.77
HLA-B-253ENST00000481849 SPTBN2O15020 2390 aa10.23□□□□□ -0.77
HLA-B-253ENST00000481849 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.23□□□□□ -0.77
HLA-B-253ENST00000481849 RRN3P2A6NIE6 340 aa10.23□□□□□ -0.77
HLA-B-253ENST00000481849 M0QZ92 97 aa10.23□□□□□ -0.77
HLA-B-253ENST00000481849 ADAMTS3O15072 1205 aa10.23□□□□□ -0.77
HLA-B-253ENST00000481849 CCNE2O96020 404 aa10.23□□□□□ -0.77
HLA-B-253ENST00000481849 FOSP01100 380 aaPredicted RBP10.23□□□□□ -0.77
HLA-B-253ENST00000481849 VSIG8P0DPA2 414 aa10.23□□□□□ -0.77
HLA-B-253ENST00000481849 IL9P15248 144 aa10.23□□□□□ -0.77
HLA-B-253ENST00000481849 METAP2P50579 478 aaKnown RBP eCLIP10.23□□□□□ -0.77
HLA-B-253ENST00000481849 BTG3Q14201 252 aaPredicted RBP10.23□□□□□ -0.77
HLA-B-253ENST00000481849 KRT32Q14532 448 aa10.23□□□□□ -0.77
HLA-B-253ENST00000481849 TMEM266Q2M3C6 531 aa10.23□□□□□ -0.77
HLA-B-253ENST00000481849 PAN2Q504Q3 1202 aaKnown RBP10.23□□□□□ -0.77
HLA-B-253ENST00000481849 TIGD5Q53EQ6 642 aa10.23□□□□□ -0.77
HLA-B-253ENST00000481849 IER5Q5VY09 327 aa10.23□□□□□ -0.77
HLA-B-253ENST00000481849 TSHZ1Q6ZSZ6 1077 aa10.23□□□□□ -0.77
HLA-B-253ENST00000481849 Q6ZUG5 572 aa10.23□□□□□ -0.77
HLA-B-253ENST00000481849 TRMT1LQ7Z2T5 733 aaKnown RBP10.23□□□□□ -0.77
HLA-B-253ENST00000481849 RPAINQ86UA6 219 aa10.23□□□□□ -0.77
HLA-B-253ENST00000481849 PLA2G4DQ86XP0 818 aa10.23□□□□□ -0.77
HLA-B-253ENST00000481849 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.23□□□□□ -0.77
HLA-B-253ENST00000481849 LINC01599Q8WXQ3 324 aa10.23□□□□□ -0.77
HLA-B-253ENST00000481849 KCTD15Q96SI1 283 aaPredicted RBP10.23□□□□□ -0.77
HLA-B-253ENST00000481849 PPP1R16BQ96T49 567 aa10.23□□□□□ -0.77
HLA-B-253ENST00000481849 KDM4CQ9H3R0 1056 aa10.23□□□□□ -0.77
HLA-B-253ENST00000481849 CD320Q9NPF0 282 aa10.23□□□□□ -0.77
HLA-B-253ENST00000481849 DNMT3LQ9UJW3 386 aa10.23□□□□□ -0.77
HLA-B-253ENST00000481849 CDV3Q9UKY7 258 aaKnown RBP10.23□□□□□ -0.77
HLA-B-253ENST00000481849 TRPV2Q9Y5S1 764 aa10.23□□□□□ -0.77
HLA-B-253ENST00000481849 ADGRA3Q8IWK6 1321 aa10.23□□□□□ -0.77
HLA-B-253ENST00000481849 TTLL8A6PVC2 850 aa10.22□□□□□ -0.77
HLA-B-253ENST00000481849 FAM86B1E9PN63 330 aa10.22□□□□□ -0.77
HLA-B-253ENST00000481849 MEIS1O00470 390 aa10.22□□□□□ -0.77
HLA-B-253ENST00000481849 GRM6O15303 877 aa10.22□□□□□ -0.77
HLA-B-253ENST00000481849 AP1G2O75843 785 aa10.22□□□□□ -0.77
HLA-B-253ENST00000481849 FAM86B2P0C5J1 330 aa10.22□□□□□ -0.77
HLA-B-253ENST00000481849 BMPR1AP36894 532 aa10.22□□□□□ -0.77
HLA-B-253ENST00000481849 SREBF1P36956 1147 aa10.22□□□□□ -0.77
HLA-B-253ENST00000481849 PAK2Q13177 524 aa10.22□□□□□ -0.77
HLA-B-253ENST00000481849 AP3B2Q13367 1082 aa10.22□□□□□ -0.77
HLA-B-253ENST00000481849 CLUL1Q15846 466 aa10.22□□□□□ -0.77
HLA-B-253ENST00000481849 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.22□□□□□ -0.77
HLA-B-253ENST00000481849 LEXMQ3ZCV2 418 aa10.22□□□□□ -0.77
HLA-B-253ENST00000481849 MTHFD1LQ6UB35 978 aa10.22□□□□□ -0.77
HLA-B-253ENST00000481849 PLPPR4Q7Z2D5 763 aa10.22□□□□□ -0.77
HLA-B-253ENST00000481849 RTN4RL1Q86UN2 441 aaPredicted RBP10.22□□□□□ -0.77
HLA-B-253ENST00000481849 TNPO1Q92973 898 aaKnown RBP10.22□□□□□ -0.77
HLA-B-253ENST00000481849 BRF1Q92994 677 aa10.22□□□□□ -0.77
HLA-B-253ENST00000481849 CELF4Q9BZC1 486 aaKnown RBP10.22□□□□□ -0.77
HLA-B-253ENST00000481849 NSUN3Q9H649 340 aaKnown RBP10.22□□□□□ -0.77
HLA-B-253ENST00000481849 IGFLR1Q9H665 355 aa10.22□□□□□ -0.77
HLA-B-253ENST00000481849 CLDND1Q9NY35 253 aa10.22□□□□□ -0.77
HLA-B-253ENST00000481849 PADI3Q9ULW8 664 aa10.22□□□□□ -0.77
HLA-B-253ENST00000481849 PCDHA2Q9Y5H9 948 aa10.22□□□□□ -0.77
HLA-B-253ENST00000481849 TRIP12Q14669 1992 aaPredicted RBP10.22□□□□□ -0.77
HLA-B-253ENST00000481849 NFASCO94856 1347 aa10.22□□□□□ -0.77
HLA-B-253ENST00000481849 BAZ2BQ9UIF8 2168 aaKnown RBP10.22□□□□□ -0.77
HLA-B-253ENST00000481849 FIGNL2A6NMB9 653 aa10.21□□□□□ -0.77
HLA-B-253ENST00000481849 hCG_1984214I3L0E3 225 aa10.21□□□□□ -0.77
HLA-B-253ENST00000481849 HMGB1P09429 215 aaKnown RBP10.21□□□□□ -0.77
HLA-B-253ENST00000481849 LINC00271P0C7V0 271 aa10.21□□□□□ -0.77
HLA-B-253ENST00000481849 SCG2P13521 617 aa10.21□□□□□ -0.77
HLA-B-253ENST00000481849 KLRC1P26715 233 aa10.21□□□□□ -0.77
HLA-B-253ENST00000481849 GATMP50440 423 aa10.21□□□□□ -0.77
HLA-B-253ENST00000481849 KRT76Q01546 638 aa10.21□□□□□ -0.77
HLA-B-253ENST00000481849 PTK2Q05397 1052 aa10.21□□□□□ -0.77
HLA-B-253ENST00000481849 DHX9Q08211 1270 aaKnown RBP10.21□□□□□ -0.77
HLA-B-253ENST00000481849 CBLBQ13191 982 aa10.21□□□□□ -0.77
HLA-B-253ENST00000481849 ST3GAL2Q16842 350 aa10.21□□□□□ -0.77
HLA-B-253ENST00000481849 PFKFB3Q16875 520 aaPredicted RBP10.21□□□□□ -0.77
HLA-B-253ENST00000481849 TSGA10IPQ3SY00 556 aa10.21□□□□□ -0.77
HLA-B-253ENST00000481849 FAM160B1Q5W0V3 765 aa10.21□□□□□ -0.77
HLA-B-253ENST00000481849 SWSAP1Q6NVH7 229 aa10.21□□□□□ -0.77
HLA-B-253ENST00000481849 CCDC60Q8IWA6 550 aaPredicted RBP10.21□□□□□ -0.77
HLA-B-253ENST00000481849 CKAP2LQ8IYA6 745 aa10.21□□□□□ -0.77
HLA-B-253ENST00000481849 ZNF713Q8N859 430 aaPredicted RBP10.21□□□□□ -0.77
HLA-B-253ENST00000481849 RASGRP4Q8TDF6 673 aa10.21□□□□□ -0.77
HLA-B-253ENST00000481849 PHKBQ93100 1093 aa10.21□□□□□ -0.77
HLA-B-253ENST00000481849 ZNF577Q9BSK1 485 aa10.21□□□□□ -0.77
HLA-B-253ENST00000481849 C11orf84Q9BUA3 381 aaPredicted RBP10.21□□□□□ -0.77
HLA-B-253ENST00000481849 FAM117AQ9C073 453 aa10.21□□□□□ -0.77
HLA-B-253ENST00000481849 GLT8D2Q9H1C3 349 aa10.21□□□□□ -0.77
HLA-B-253ENST00000481849 RC3H2Q9HBD1 1191 aaKnown RBP10.21□□□□□ -0.77
HLA-B-253ENST00000481849 ALG13Q9NP73 1137 aaKnown RBP10.21□□□□□ -0.77
HLA-B-253ENST00000481849 ZNF302Q9NR11 478 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms