RNA–Protein interactions for RNA: ENST00000481109.5

PRPF4B-206, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 2,364 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-206ENST00000481109 NRG4Q8WWG1 115 aa11.11□□□□□ -0.63
PRPF4B-206ENST00000481109 CASKIN2Q8WXE0 1202 aa11.11□□□□□ -0.63
PRPF4B-206ENST00000481109 PSKH2Q96QS6 385 aa11.11□□□□□ -0.63
PRPF4B-206ENST00000481109 HINFPQ9BQA5 517 aa11.11□□□□□ -0.63
PRPF4B-206ENST00000481109 ISCUQ9H1K1 167 aa11.11□□□□□ -0.63
PRPF4B-206ENST00000481109 TLR7Q9NYK1 1049 aaKnown RBP11.11□□□□□ -0.63
PRPF4B-206ENST00000481109 STX18Q9P2W9 335 aaKnown RBP11.11□□□□□ -0.63
PRPF4B-206ENST00000481109 UVRAGQ9P2Y5 699 aa11.11□□□□□ -0.63
PRPF4B-206ENST00000481109 DIS3Q9Y2L1 958 aaKnown RBP11.11□□□□□ -0.63
PRPF4B-206ENST00000481109 COQ6Q9Y2Z9 468 aa11.11□□□□□ -0.63
PRPF4B-206ENST00000481109 RBM8AQ9Y5S9 174 aaKnown RBP11.11□□□□□ -0.63
PRPF4B-206ENST00000481109 TLL2Q9Y6L7 1015 aa11.11□□□□□ -0.63
PRPF4B-206ENST00000481109 NEXMIFQ5QGS0 1516 aa11.1□□□□□ -0.63
PRPF4B-206ENST00000481109 CAMSAP1Q5T5Y3 1602 aa11.1□□□□□ -0.63
PRPF4B-206ENST00000481109 SOBPA7XYQ1 873 aa11.1□□□□□ -0.63
PRPF4B-206ENST00000481109 CDK2AP1O14519 115 aa11.1□□□□□ -0.63
PRPF4B-206ENST00000481109 NDC80O14777 642 aa11.1□□□□□ -0.63
PRPF4B-206ENST00000481109 AP1G1O43747 822 aa11.1□□□□□ -0.63
PRPF4B-206ENST00000481109 EYA4O95677 639 aa11.1□□□□□ -0.63
PRPF4B-206ENST00000481109 MYBP10242 640 aa11.1□□□□□ -0.63
PRPF4B-206ENST00000481109 MZF1P28698 734 aaPredicted RBP11.1□□□□□ -0.63
PRPF4B-206ENST00000481109 CDC27P30260 824 aa11.1□□□□□ -0.63
PRPF4B-206ENST00000481109 CETN2P41208 172 aa11.1□□□□□ -0.63
PRPF4B-206ENST00000481109 RPS3AP61247 264 aaKnown RBP11.1□□□□□ -0.63
PRPF4B-206ENST00000481109 FMR1Q06787 632 aaKnown RBP eCLIP11.1□□□□□ -0.63
PRPF4B-206ENST00000481109 DTHD1Q6ZMT9 781 aa11.1□□□□□ -0.63
PRPF4B-206ENST00000481109 FASTKD5Q7L8L6 764 aaKnown RBP11.1□□□□□ -0.63
PRPF4B-206ENST00000481109 HS2ST1Q7LGA3 356 aa11.1□□□□□ -0.63
PRPF4B-206ENST00000481109 SPARTQ8N0X7 666 aa11.1□□□□□ -0.63
PRPF4B-206ENST00000481109 LSMEM1Q8N8F7 131 aa11.1□□□□□ -0.63
PRPF4B-206ENST00000481109 UQCC2Q9BRT2 126 aa11.1□□□□□ -0.63
PRPF4B-206ENST00000481109 KLHL3Q9UH77 587 aa11.1□□□□□ -0.63
PRPF4B-206ENST00000481109 PNMA3Q9UL41 463 aa11.1□□□□□ -0.63
PRPF4B-206ENST00000481109 TMCC3Q9ULS5 477 aa11.1□□□□□ -0.63
PRPF4B-206ENST00000481109 TRIM33Q9UPN9 1127 aa11.1□□□□□ -0.63
PRPF4B-206ENST00000481109 STXBP5LQ9Y2K9 1186 aa11.1□□□□□ -0.63
PRPF4B-206ENST00000481109 EID1Q9Y6B2 187 aa11.1□□□□□ -0.63
PRPF4B-206ENST00000481109 USP42Q9H9J4 1324 aaKnown RBP11.1□□□□□ -0.63
PRPF4B-206ENST00000481109 ARHGEF28Q8N1W1 1705 aaKnown RBP11.1□□□□□ -0.63
PRPF4B-206ENST00000481109 RNF113AO15541 343 aaKnown RBP11.1□□□□□ -0.63
PRPF4B-206ENST00000481109 PRCPP42785 496 aa11.1□□□□□ -0.63
PRPF4B-206ENST00000481109 GSSP48637 474 aa11.1□□□□□ -0.63
PRPF4B-206ENST00000481109 PLCD1P51178 756 aa11.1□□□□□ -0.63
PRPF4B-206ENST00000481109 RPL26P61254 145 aaKnown RBP11.1□□□□□ -0.63
PRPF4B-206ENST00000481109 PNOCQ13519 176 aa11.1□□□□□ -0.63
PRPF4B-206ENST00000481109 COG2Q14746 738 aa11.1□□□□□ -0.63
PRPF4B-206ENST00000481109 CDKAL1Q5VV42 579 aa11.1□□□□□ -0.63
PRPF4B-206ENST00000481109 SPOPLQ6IQ16 392 aa11.1□□□□□ -0.63
PRPF4B-206ENST00000481109 BORAQ6PGQ7 559 aa11.1□□□□□ -0.63
PRPF4B-206ENST00000481109 ITIH5Q86UX2 942 aa11.1□□□□□ -0.63
PRPF4B-206ENST00000481109 GIPC3Q8TF64 312 aa11.1□□□□□ -0.63
PRPF4B-206ENST00000481109 ATL1Q8WXF7 558 aa11.1□□□□□ -0.63
PRPF4B-206ENST00000481109 DENND2DQ9H6A0 471 aaPredicted RBP11.1□□□□□ -0.63
PRPF4B-206ENST00000481109 CNGB3Q9NQW8 809 aa11.1□□□□□ -0.63
PRPF4B-206ENST00000481109 GIN1Q9NXP7 522 aa11.1□□□□□ -0.63
PRPF4B-206ENST00000481109 CLIC5Q9NZA1 410 aa11.1□□□□□ -0.63
PRPF4B-206ENST00000481109 FAF1Q9UNN5 650 aaPredicted RBP11.1□□□□□ -0.63
PRPF4B-206ENST00000481109 TMA7Q9Y2S6 64 aaKnown RBP11.1□□□□□ -0.63
PRPF4B-206ENST00000481109 TTLL13PA6NNM8 815 aa11.09□□□□□ -0.63
PRPF4B-206ENST00000481109 SNX2O60749 519 aa11.09□□□□□ -0.63
PRPF4B-206ENST00000481109 HNRNPCL1O60812 293 aaKnown RBP11.09□□□□□ -0.63
PRPF4B-206ENST00000481109 BAIAP3O94812 1187 aa11.09□□□□□ -0.63
PRPF4B-206ENST00000481109 B2MP61769 119 aa11.09□□□□□ -0.63
PRPF4B-206ENST00000481109 METTL16Q86W50 562 aaKnown RBP11.09□□□□□ -0.63
PRPF4B-206ENST00000481109 CEP70Q8NHQ1 597 aa11.09□□□□□ -0.63
PRPF4B-206ENST00000481109 PGM2Q96G03 612 aa11.09□□□□□ -0.63
PRPF4B-206ENST00000481109 OTUD5Q96G74 571 aa11.09□□□□□ -0.63
PRPF4B-206ENST00000481109 DDX50Q9BQ39 737 aaKnown RBP11.09□□□□□ -0.63
PRPF4B-206ENST00000481109 LRRC27Q9C0I9 530 aa11.09□□□□□ -0.63
PRPF4B-206ENST00000481109 SEMA4AQ9H3S1 761 aa11.09□□□□□ -0.63
PRPF4B-206ENST00000481109 PHAXQ9H814 394 aaKnown RBP11.09□□□□□ -0.63
PRPF4B-206ENST00000481109 RBM12Q9NTZ6 932 aaKnown RBP11.09□□□□□ -0.63
PRPF4B-206ENST00000481109 INTS9Q9NV88 658 aaKnown RBP11.09□□□□□ -0.63
PRPF4B-206ENST00000481109 AIPL1Q9NZN9 384 aa11.09□□□□□ -0.63
PRPF4B-206ENST00000481109 MAFFQ9ULX9 164 aa11.09□□□□□ -0.63
PRPF4B-206ENST00000481109 PCDHA5Q9Y5H7 936 aa11.09□□□□□ -0.63
PRPF4B-206ENST00000481109 ARHGAP10A1A4S6 786 aa11.09□□□□□ -0.63
PRPF4B-206ENST00000481109 GRID2IPA4D2P6 1211 aa11.09□□□□□ -0.63
PRPF4B-206ENST00000481109 PABPN1LA6NDY0 278 aaKnown RBP11.09□□□□□ -0.63
PRPF4B-206ENST00000481109 H0Y3Z8 333 aa11.09□□□□□ -0.63
PRPF4B-206ENST00000481109 PPARGP37231 505 aaPredicted RBP11.09□□□□□ -0.63
PRPF4B-206ENST00000481109 VPS41P49754 854 aa11.09□□□□□ -0.63
PRPF4B-206ENST00000481109 MKRN3Q13064 507 aaKnown RBP11.09□□□□□ -0.63
PRPF4B-206ENST00000481109 HNRNPDQ14103 355 aaKnown RBP11.09□□□□□ -0.63
PRPF4B-206ENST00000481109 MORC3Q14149 939 aa11.09□□□□□ -0.63
PRPF4B-206ENST00000481109 KRT32Q14532 448 aa11.09□□□□□ -0.63
PRPF4B-206ENST00000481109 PHKG1Q16816 387 aa11.09□□□□□ -0.63
PRPF4B-206ENST00000481109 CFAP221Q4G0U5 840 aa11.09□□□□□ -0.63
PRPF4B-206ENST00000481109 MAP3K21Q5TCX8 1036 aa11.09□□□□□ -0.63
PRPF4B-206ENST00000481109 SPATA1Q5VX52 437 aa11.09□□□□□ -0.63
PRPF4B-206ENST00000481109 DENND2CQ68D51 928 aa11.09□□□□□ -0.63
PRPF4B-206ENST00000481109 CCDC62Q6P9F0 684 aa11.09□□□□□ -0.63
PRPF4B-206ENST00000481109 TUBA3EQ6PEY2 450 aa11.09□□□□□ -0.63
PRPF4B-206ENST00000481109 CROCCP2Q86T23 111 aa11.09□□□□□ -0.63
PRPF4B-206ENST00000481109 MDM1Q8TC05 714 aa11.09□□□□□ -0.63
PRPF4B-206ENST00000481109 DYDC2Q96IM9 177 aa11.09□□□□□ -0.63
PRPF4B-206ENST00000481109 PRICKLE1Q96MT3 831 aaPredicted RBP11.09□□□□□ -0.63
PRPF4B-206ENST00000481109 DNAJC7Q99615 494 aa11.09□□□□□ -0.63
PRPF4B-206ENST00000481109 CDK19Q9BWU1 502 aa11.09□□□□□ -0.63
PRPF4B-206ENST00000481109 NUF2Q9BZD4 464 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms