RNA–Protein interactions for RNA: ENST00000480956.1

LSM5-210, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM5, Length 1,736 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-210ENST00000480956 FSCN1Q16658 493 aaKnown RBP9.12□□□□□ -0.95
LSM5-210ENST00000480956 MFSD6Q6ZSS7 791 aa9.12□□□□□ -0.95
LSM5-210ENST00000480956 CPOQ8IVL8 374 aa9.12□□□□□ -0.95
LSM5-210ENST00000480956 HERVK_113Q902F9 699 aa9.12□□□□□ -0.95
LSM5-210ENST00000480956 FBXW5Q969U6 566 aa9.12□□□□□ -0.95
LSM5-210ENST00000480956 NCAPGQ9BPX3 1015 aa9.12□□□□□ -0.95
LSM5-210ENST00000480956 DPH2Q9BQC3 489 aaPredicted RBP9.12□□□□□ -0.95
LSM5-210ENST00000480956 ANP32EQ9BTT0 268 aa9.12□□□□□ -0.95
LSM5-210ENST00000480956 PI4KAP2A4QPH2 592 aa9.11□□□□□ -0.95
LSM5-210ENST00000480956 RTCAO00442 366 aaKnown RBP9.11□□□□□ -0.95
LSM5-210ENST00000480956 UPP2O95045 317 aa9.11□□□□□ -0.95
LSM5-210ENST00000480956 RTN3O95197 1032 aaPredicted RBP9.11□□□□□ -0.95
LSM5-210ENST00000480956 EEF1GP26641 437 aaKnown RBP9.11□□□□□ -0.95
LSM5-210ENST00000480956 MC4RP32245 332 aa9.11□□□□□ -0.95
LSM5-210ENST00000480956 NBPF12Q5TAG4 269 aaPredicted RBP9.11□□□□□ -0.95
LSM5-210ENST00000480956 FAM47EQ6ZV65 393 aa9.11□□□□□ -0.95
LSM5-210ENST00000480956 BTN2A1Q7KYR7 527 aa9.11□□□□□ -0.95
LSM5-210ENST00000480956 MOGAT3Q86VF5 341 aa9.11□□□□□ -0.95
LSM5-210ENST00000480956 SIRT2Q8IXJ6 389 aa9.11□□□□□ -0.95
LSM5-210ENST00000480956 MICALL1Q8N3F8 863 aa9.11□□□□□ -0.95
LSM5-210ENST00000480956 FIBCD1Q8N539 461 aa9.11□□□□□ -0.95
LSM5-210ENST00000480956 MARCH10Q8NA82 808 aaPredicted RBP9.11□□□□□ -0.95
LSM5-210ENST00000480956 SYTL5Q8TDW5 730 aaPredicted RBP9.11□□□□□ -0.95
LSM5-210ENST00000480956 ADAMTS15Q8TE58 950 aa9.11□□□□□ -0.95
LSM5-210ENST00000480956 CYB5D2Q8WUJ1 264 aa9.11□□□□□ -0.95
LSM5-210ENST00000480956 DESI2Q9BSY9 194 aa9.11□□□□□ -0.95
LSM5-210ENST00000480956 ARHGAP39Q9C0H5 1083 aa9.11□□□□□ -0.95
LSM5-210ENST00000480956 LACRTQ9GZZ8 138 aa9.11□□□□□ -0.95
LSM5-210ENST00000480956 ZNF287Q9HBT7 754 aa9.11□□□□□ -0.95
LSM5-210ENST00000480956 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.11□□□□□ -0.95
LSM5-210ENST00000480956 FBXL21Q9UKT6 434 aa9.11□□□□□ -0.95
LSM5-210ENST00000480956 HIF3AQ9Y2N7 669 aa9.11□□□□□ -0.95
LSM5-210ENST00000480956 WNT9AO14904 365 aa9.11□□□□□ -0.95
LSM5-210ENST00000480956 MSCO60682 206 aa9.11□□□□□ -0.95
LSM5-210ENST00000480956 KRT1P04264 644 aa9.11□□□□□ -0.95
LSM5-210ENST00000480956 ZNF865P0CJ78 1059 aaPredicted RBP9.11□□□□□ -0.95
LSM5-210ENST00000480956 POLD2P49005 469 aa9.11□□□□□ -0.95
LSM5-210ENST00000480956 PDE6CP51160 858 aa9.11□□□□□ -0.95
LSM5-210ENST00000480956 ZNF132P52740 706 aa9.11□□□□□ -0.95
LSM5-210ENST00000480956 CREMQ03060 361 aa9.11□□□□□ -0.95
LSM5-210ENST00000480956 CALD1Q05682 793 aaKnown RBP9.11□□□□□ -0.95
LSM5-210ENST00000480956 SMAD1Q15797 465 aaKnown RBP9.11□□□□□ -0.95
LSM5-210ENST00000480956 LCE2CQ5TA81 110 aa9.11□□□□□ -0.95
LSM5-210ENST00000480956 FIGNL1Q6PIW4 674 aa9.11□□□□□ -0.95
LSM5-210ENST00000480956 HID1Q8IV36 788 aa9.11□□□□□ -0.95
LSM5-210ENST00000480956 ZDHHC15Q96MV8 337 aa9.11□□□□□ -0.95
LSM5-210ENST00000480956 PCIF1Q9H4Z3 704 aa9.11□□□□□ -0.95
LSM5-210ENST00000480956 PRDM5Q9NQX1 630 aaPredicted RBP9.11□□□□□ -0.95
LSM5-210ENST00000480956 OGDHLQ9ULD0 1010 aa9.11□□□□□ -0.95
LSM5-210ENST00000480956 PCDHB12Q9Y5F1 795 aa9.11□□□□□ -0.95
LSM5-210ENST00000480956 FSBPO95073 299 aa9.1□□□□□ -0.95
LSM5-210ENST00000480956 ITIH2P19823 946 aa9.1□□□□□ -0.95
LSM5-210ENST00000480956 SLC5A3P53794 718 aa9.1□□□□□ -0.95
LSM5-210ENST00000480956 CASP6P55212 293 aa9.1□□□□□ -0.95
LSM5-210ENST00000480956 ARF3P61204 181 aaPredicted RBP9.1□□□□□ -0.95
LSM5-210ENST00000480956 ARF1P84077 181 aaKnown RBP9.1□□□□□ -0.95
LSM5-210ENST00000480956 RING1Q06587 406 aa9.1□□□□□ -0.95
LSM5-210ENST00000480956 TRIM29Q14134 588 aa9.1□□□□□ -0.95
LSM5-210ENST00000480956 ERV3-1Q14264 604 aa9.1□□□□□ -0.95
LSM5-210ENST00000480956 POU4F3Q15319 338 aa9.1□□□□□ -0.95
LSM5-210ENST00000480956 KIZQ2M2Z5 673 aa9.1□□□□□ -0.95
LSM5-210ENST00000480956 DPY19L1Q2PZI1 675 aa9.1□□□□□ -0.95
LSM5-210ENST00000480956 NBPF9Q3BBW0 867 aa9.1□□□□□ -0.95
LSM5-210ENST00000480956 CCDC157Q569K6 752 aa9.1□□□□□ -0.95
LSM5-210ENST00000480956 ZMYM1Q5SVZ6 1142 aa9.1□□□□□ -0.95
LSM5-210ENST00000480956 CC2D1BQ5T0F9 858 aaKnown RBP9.1□□□□□ -0.95
LSM5-210ENST00000480956 C16orf59Q7L2K0 433 aa9.1□□□□□ -0.95
LSM5-210ENST00000480956 WAPLQ7Z5K2 1190 aa9.1□□□□□ -0.95
LSM5-210ENST00000480956 OR10H5Q8NGA6 315 aa9.1□□□□□ -0.95
LSM5-210ENST00000480956 SENP6Q9GZR1 1112 aaPredicted RBP9.1□□□□□ -0.95
LSM5-210ENST00000480956 DHX36Q9H2U1 1008 aaKnown RBP9.1□□□□□ -0.95
LSM5-210ENST00000480956 IGFLR1Q9H665 355 aa9.1□□□□□ -0.95
LSM5-210ENST00000480956 SOX17Q9H6I2 414 aaPredicted RBP9.1□□□□□ -0.95
LSM5-210ENST00000480956 SH2B1Q9NRF2 756 aaPredicted RBP9.1□□□□□ -0.95
LSM5-210ENST00000480956 WDR35Q9P2L0 1181 aa9.1□□□□□ -0.95
LSM5-210ENST00000480956 SLC39A10Q9ULF5 831 aa9.1□□□□□ -0.95
LSM5-210ENST00000480956 MKL2Q9ULH7 1088 aa9.1□□□□□ -0.95
LSM5-210ENST00000480956 EDARQ9UNE0 448 aa9.1□□□□□ -0.95
LSM5-210ENST00000480956 ZNF711Q9Y462 761 aa9.1□□□□□ -0.95
LSM5-210ENST00000480956 NR2E3Q9Y5X4 410 aa9.1□□□□□ -0.95
LSM5-210ENST00000480956 RSF1Q96T23 1441 aaPredicted RBP9.09□□□□□ -0.95
LSM5-210ENST00000480956 SENP3-EIF4A1A0A087X0R7 540 aa9.09□□□□□ -0.95
LSM5-210ENST00000480956 A0A1W2PPC4 97 aa9.09□□□□□ -0.95
LSM5-210ENST00000480956 MEFVO15553 781 aaPredicted RBP9.09□□□□□ -0.95
LSM5-210ENST00000480956 EIF4EBP3O60516 100 aaPredicted RBP9.09□□□□□ -0.95
LSM5-210ENST00000480956 STMN1P16949 149 aa9.09□□□□□ -0.95
LSM5-210ENST00000480956 BECN1Q14457 450 aa9.09□□□□□ -0.95
LSM5-210ENST00000480956 ADCK5Q3MIX3 580 aa9.09□□□□□ -0.95
LSM5-210ENST00000480956 KLHDC7AQ5VTJ3 777 aa9.09□□□□□ -0.95
LSM5-210ENST00000480956 MCM10Q7L590 875 aa9.09□□□□□ -0.95
LSM5-210ENST00000480956 KCNK18Q7Z418 384 aa9.09□□□□□ -0.95
LSM5-210ENST00000480956 C2CD5Q86YS7 1000 aa9.09□□□□□ -0.95
LSM5-210ENST00000480956 TXLNBQ8N3L3 684 aa9.09□□□□□ -0.95
LSM5-210ENST00000480956 RUBCNQ92622 972 aa9.09□□□□□ -0.95
LSM5-210ENST00000480956 N4BP2L2Q92802 583 aaPredicted RBP9.09□□□□□ -0.95
LSM5-210ENST00000480956 C18orf8Q96DM3 657 aa9.09□□□□□ -0.95
LSM5-210ENST00000480956 SLC30A3Q99726 388 aa9.09□□□□□ -0.95
LSM5-210ENST00000480956 TBK1Q9UHD2 729 aa9.09□□□□□ -0.95
LSM5-210ENST00000480956 ARHGAP26Q9UNA1 814 aa9.09□□□□□ -0.95
LSM5-210ENST00000480956 A0A088AWK7 358 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms