RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 HOXD13P35453 343 aa19.37■□□□□ 0.69
UPF3A-206ENST00000480362 CLCN3P51790 818 aa19.37■□□□□ 0.69
UPF3A-206ENST00000480362 MTFR1Q15390 333 aa19.37■□□□□ 0.69
UPF3A-206ENST00000480362 TPD52L1Q16890 204 aaPredicted RBP19.37■□□□□ 0.69
UPF3A-206ENST00000480362 BMT2Q1RMZ1 405 aa19.37■□□□□ 0.69
UPF3A-206ENST00000480362 NBPF20Q3BBV1 942 aa19.37■□□□□ 0.69
UPF3A-206ENST00000480362 KSR1Q8IVT5 923 aa19.37■□□□□ 0.69
UPF3A-206ENST00000480362 LINC01465Q8N7H1 131 aa19.37■□□□□ 0.69
UPF3A-206ENST00000480362 C7orf31Q8N865 590 aa19.37■□□□□ 0.69
UPF3A-206ENST00000480362 ARRDC4Q8NCT1 418 aa19.37■□□□□ 0.69
UPF3A-206ENST00000480362 LMBR1Q8WVP7 490 aa19.37■□□□□ 0.69
UPF3A-206ENST00000480362 PSPC1Q8WXF1 523 aaKnown RBP19.37■□□□□ 0.69
UPF3A-206ENST00000480362 ST6GALNAC4Q9H4F1 302 aa19.37■□□□□ 0.69
UPF3A-206ENST00000480362 FANCLQ9NW38 375 aa19.37■□□□□ 0.69
UPF3A-206ENST00000480362 NFE2L3Q9Y4A8 694 aa19.37■□□□□ 0.69
UPF3A-206ENST00000480362 UBE4BO95155 1302 aa19.36■□□□□ 0.69
UPF3A-206ENST00000480362 C17orf102A2RUQ5 167 aa19.36■□□□□ 0.69
UPF3A-206ENST00000480362 PPP1R37O75864 691 aa19.36■□□□□ 0.69
UPF3A-206ENST00000480362 CCL5P13501 91 aa19.36■□□□□ 0.69
UPF3A-206ENST00000480362 TMOD1P28289 359 aa19.36■□□□□ 0.69
UPF3A-206ENST00000480362 NAMPTP43490 491 aa19.36■□□□□ 0.69
UPF3A-206ENST00000480362 TPM4P67936 248 aa19.36■□□□□ 0.69
UPF3A-206ENST00000480362 GTF2BQ00403 316 aa19.36■□□□□ 0.69
UPF3A-206ENST00000480362 KCNA1Q09470 495 aa19.36■□□□□ 0.69
UPF3A-206ENST00000480362 LAMTOR4Q0VGL1 99 aa19.36■□□□□ 0.69
UPF3A-206ENST00000480362 ALCAMQ13740 583 aa19.36■□□□□ 0.69
UPF3A-206ENST00000480362 HIC1Q14526 733 aa19.36■□□□□ 0.69
UPF3A-206ENST00000480362 MXD4Q14582 209 aaPredicted RBP19.36■□□□□ 0.69
UPF3A-206ENST00000480362 KNOP1Q1ED39 458 aaKnown RBP19.36■□□□□ 0.69
UPF3A-206ENST00000480362 TTI2Q6NXR4 508 aa19.36■□□□□ 0.69
UPF3A-206ENST00000480362 NFRKBQ6P4R8 1299 aa19.36■□□□□ 0.69
UPF3A-206ENST00000480362 FBXO46Q6PJ61 603 aaPredicted RBP19.36■□□□□ 0.69
UPF3A-206ENST00000480362 TMEM161BQ8NDZ6 487 aa19.36■□□□□ 0.69
UPF3A-206ENST00000480362 DUSP9Q99956 384 aaKnown RBP19.36■□□□□ 0.69
UPF3A-206ENST00000480362 KIFC3Q9BVG8 833 aa19.36■□□□□ 0.69
UPF3A-206ENST00000480362 KCTD10Q9H3F6 313 aa19.36■□□□□ 0.69
UPF3A-206ENST00000480362 LRRIQ4A6NIV6 560 aa19.35■□□□□ 0.69
UPF3A-206ENST00000480362 ASAP2O43150 1006 aa19.35■□□□□ 0.69
UPF3A-206ENST00000480362 GNAT1P11488 350 aa19.35■□□□□ 0.69
UPF3A-206ENST00000480362 ACLYP53396 1101 aa19.35■□□□□ 0.69
UPF3A-206ENST00000480362 ADAM17P78536 824 aa19.35■□□□□ 0.69
UPF3A-206ENST00000480362 CAPSQ13938 189 aa19.35■□□□□ 0.69
UPF3A-206ENST00000480362 RHPN2Q8IUC4 686 aa19.35■□□□□ 0.69
UPF3A-206ENST00000480362 DEPTORQ8TB45 409 aa19.35■□□□□ 0.69
UPF3A-206ENST00000480362 TSG101Q99816 390 aa19.35■□□□□ 0.69
UPF3A-206ENST00000480362 TSEN34Q9BSV6 310 aaKnown RBP19.35■□□□□ 0.69
UPF3A-206ENST00000480362 RNF208Q9H0X6 261 aa19.35■□□□□ 0.69
UPF3A-206ENST00000480362 PAK6Q9NQU5 681 aaPredicted RBP19.35■□□□□ 0.69
UPF3A-206ENST00000480362 KAT6AQ92794 2004 aa19.35■□□□□ 0.69
UPF3A-206ENST00000480362 ADGRA3Q8IWK6 1321 aa19.34■□□□□ 0.69
UPF3A-206ENST00000480362 DENND3A2RUS2 1198 aa19.34■□□□□ 0.69
UPF3A-206ENST00000480362 MBLAC1A4D2B0 266 aaPredicted RBP19.34■□□□□ 0.69
UPF3A-206ENST00000480362 H0YCG3 227 aa19.34■□□□□ 0.69
UPF3A-206ENST00000480362 CABYRO75952 493 aa19.34■□□□□ 0.69
UPF3A-206ENST00000480362 GJB1P08034 283 aa19.34■□□□□ 0.69
UPF3A-206ENST00000480362 SRGAP2CP0DJJ0 459 aa19.34■□□□□ 0.69
UPF3A-206ENST00000480362 ZNF200P98182 395 aaPredicted RBP19.34■□□□□ 0.69
UPF3A-206ENST00000480362 LRRC63Q05C16 580 aa19.34■□□□□ 0.69
UPF3A-206ENST00000480362 PKN2Q16513 984 aaKnown RBP19.34■□□□□ 0.69
UPF3A-206ENST00000480362 VTI1AQ96AJ9 217 aa19.34■□□□□ 0.69
UPF3A-206ENST00000480362 HVCN1Q96D96 273 aa19.34■□□□□ 0.69
UPF3A-206ENST00000480362 DEFB118Q96PH6 123 aa19.34■□□□□ 0.69
UPF3A-206ENST00000480362 ACCSQ96QU6 501 aa19.34■□□□□ 0.69
UPF3A-206ENST00000480362 SRRTQ9BXP5 876 aaKnown RBP19.34■□□□□ 0.69
UPF3A-206ENST00000480362 HSD3B7Q9H2F3 369 aa19.34■□□□□ 0.69
UPF3A-206ENST00000480362 SAMSN1Q9NSI8 373 aaKnown RBP19.34■□□□□ 0.69
UPF3A-206ENST00000480362 ARHGAP28Q9P2N2 729 aa19.34■□□□□ 0.69
UPF3A-206ENST00000480362 TBX20Q9UMR3 447 aa19.34■□□□□ 0.69
UPF3A-206ENST00000480362 MOXD2PA6NHM9 499 aa19.33■□□□□ 0.68
UPF3A-206ENST00000480362 PDXKO00764 312 aa19.33■□□□□ 0.68
UPF3A-206ENST00000480362 TREHO43280 583 aa19.33■□□□□ 0.68
UPF3A-206ENST00000480362 CYP2C9P11712 490 aa19.33■□□□□ 0.68
UPF3A-206ENST00000480362 HOXC8P31273 242 aa19.33■□□□□ 0.68
UPF3A-206ENST00000480362 TFDP1Q14186 410 aa19.33■□□□□ 0.68
UPF3A-206ENST00000480362 ZCWPW2Q504Y3 356 aa19.33■□□□□ 0.68
UPF3A-206ENST00000480362 HSP90AA4PQ58FG1 418 aa19.33■□□□□ 0.68
UPF3A-206ENST00000480362 FAM47CQ5HY64 1035 aa19.33■□□□□ 0.68
UPF3A-206ENST00000480362 FOXR2Q6PJQ5 311 aa19.33■□□□□ 0.68
UPF3A-206ENST00000480362 KIAA0319LQ8IZA0 1049 aa19.33■□□□□ 0.68
UPF3A-206ENST00000480362 SYCP3Q8IZU3 236 aa19.33■□□□□ 0.68
UPF3A-206ENST00000480362 CSGALNACT2Q8N6G5 542 aa19.33■□□□□ 0.68
UPF3A-206ENST00000480362 MAP7D2Q96T17 732 aa19.33■□□□□ 0.68
UPF3A-206ENST00000480362 IKZF4Q9H2S9 585 aa19.33■□□□□ 0.68
UPF3A-206ENST00000480362 TMEM206Q9H813 350 aa19.33■□□□□ 0.68
UPF3A-206ENST00000480362 TYW1Q9NV66 732 aaKnown RBP19.33■□□□□ 0.68
UPF3A-206ENST00000480362 GTF2IRD1Q9UHL9 959 aa19.33■□□□□ 0.68
UPF3A-206ENST00000480362 TRAF3IP3Q9Y228 551 aa19.33■□□□□ 0.68
UPF3A-206ENST00000480362 AKT3Q9Y243 479 aa19.33■□□□□ 0.68
UPF3A-206ENST00000480362 EVPLQ92817 2033 aa19.33■□□□□ 0.68
UPF3A-206ENST00000480362 ZMYM2Q9UBW7 1377 aa19.32■□□□□ 0.68
UPF3A-206ENST00000480362 FRMPD3Q5JV73 1810 aa19.32■□□□□ 0.68
UPF3A-206ENST00000480362 GRIN2DO15399 1336 aa19.32■□□□□ 0.68
UPF3A-206ENST00000480362 SCN10AQ9Y5Y9 1956 aa19.32■□□□□ 0.68
UPF3A-206ENST00000480362 SMIM35A0A1B0GVV1 85 aa19.32■□□□□ 0.68
UPF3A-206ENST00000480362 TGFB1I1O43294 461 aa19.32■□□□□ 0.68
UPF3A-206ENST00000480362 CALUO43852 315 aaPredicted RBP19.32■□□□□ 0.68
UPF3A-206ENST00000480362 ABCD1P33897 745 aa19.32■□□□□ 0.68
UPF3A-206ENST00000480362 PLCB2Q00722 1185 aa19.32■□□□□ 0.68
UPF3A-206ENST00000480362 PPP4R3CPQ6ZMV5 832 aa19.32■□□□□ 0.68
UPF3A-206ENST00000480362 RUFY4Q6ZNE9 571 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms