RNA–Protein interactions for RNA: ENST00000480353.5

CDK9-203, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 706 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-203ENST00000480353 ERMNQ8TAM6 284 aa17.12■□□□□ 0.33
CDK9-203ENST00000480353 MICAL1Q8TDZ2 1067 aa17.12■□□□□ 0.33
CDK9-203ENST00000480353 TMEM143Q96AN5 459 aa17.12■□□□□ 0.33
CDK9-203ENST00000480353 TMEM117Q9H0C3 514 aa17.12■□□□□ 0.33
CDK9-203ENST00000480353 CHST12Q9NRB3 414 aa17.12■□□□□ 0.33
CDK9-203ENST00000480353 CLDND1Q9NY35 253 aa17.12■□□□□ 0.33
CDK9-203ENST00000480353 PLAGL2Q9UPG8 496 aa17.12■□□□□ 0.33
CDK9-203ENST00000480353 ASAP2O43150 1006 aa17.11■□□□□ 0.33
CDK9-203ENST00000480353 BMP1P13497 986 aa17.11■□□□□ 0.33
CDK9-203ENST00000480353 LAG3P18627 525 aa17.11■□□□□ 0.33
CDK9-203ENST00000480353 KSR1Q8IVT5 923 aa17.11■□□□□ 0.33
CDK9-203ENST00000480353 FBXO18Q8NFZ0 1043 aa17.11■□□□□ 0.33
CDK9-203ENST00000480353 POF1BQ8WVV4 589 aa17.11■□□□□ 0.33
CDK9-203ENST00000480353 CEP89Q96ST8 783 aa17.11■□□□□ 0.33
CDK9-203ENST00000480353 IGFLR1Q9H665 355 aa17.11■□□□□ 0.33
CDK9-203ENST00000480353 TYW1Q9NV66 732 aaKnown RBP17.11■□□□□ 0.33
CDK9-203ENST00000480353 WRAP73Q9P2S5 460 aaPredicted RBP17.11■□□□□ 0.33
CDK9-203ENST00000480353 FAM50BQ9Y247 325 aa17.11■□□□□ 0.33
CDK9-203ENST00000480353 SLITRK3O94933 977 aa17.1■□□□□ 0.33
CDK9-203ENST00000480353 EOMESO95936 686 aa17.1■□□□□ 0.33
CDK9-203ENST00000480353 ITGB1P05556 798 aa17.1■□□□□ 0.33
CDK9-203ENST00000480353 LINC00271P0C7V0 271 aa17.1■□□□□ 0.33
CDK9-203ENST00000480353 FAM189BP81408 668 aa17.1■□□□□ 0.33
CDK9-203ENST00000480353 SPIRE1Q08AE8 756 aa17.1■□□□□ 0.33
CDK9-203ENST00000480353 NCBP1Q09161 790 aaKnown RBP17.1■□□□□ 0.33
CDK9-203ENST00000480353 ORC2Q13416 577 aaPredicted RBP17.1■□□□□ 0.33
CDK9-203ENST00000480353 TFDP1Q14186 410 aa17.1■□□□□ 0.33
CDK9-203ENST00000480353 ZNF174Q15697 407 aa17.1■□□□□ 0.33
CDK9-203ENST00000480353 TTC38Q5R3I4 469 aa17.1■□□□□ 0.33
CDK9-203ENST00000480353 NOSTRINQ8IVI9 506 aa17.1■□□□□ 0.33
CDK9-203ENST00000480353 LRRC43Q8N309 656 aa17.1■□□□□ 0.33
CDK9-203ENST00000480353 ZNF579Q8NAF0 562 aaKnown RBP17.1■□□□□ 0.33
CDK9-203ENST00000480353 PRPF31Q8WWY3 499 aaKnown RBP17.1■□□□□ 0.33
CDK9-203ENST00000480353 KIF2CQ99661 725 aa17.1■□□□□ 0.33
CDK9-203ENST00000480353 DHX33Q9H6R0 707 aaKnown RBP17.1■□□□□ 0.33
CDK9-203ENST00000480353 PLXNA4Q9HCM2 1894 aa17.1■□□□□ 0.33
CDK9-203ENST00000480353 ATG2AQ2TAZ0 1938 aa17.09■□□□□ 0.33
CDK9-203ENST00000480353 A0A0U1RQF3 1178 aa17.09■□□□□ 0.33
CDK9-203ENST00000480353 POTEMA6NI47 508 aa17.09■□□□□ 0.33
CDK9-203ENST00000480353 DGAT1O75907 488 aa17.09■□□□□ 0.33
CDK9-203ENST00000480353 ERLIN2O94905 339 aa17.09■□□□□ 0.33
CDK9-203ENST00000480353 OR52Z1P0C646 297 aa17.09■□□□□ 0.33
CDK9-203ENST00000480353 TECP42680 631 aa17.09■□□□□ 0.33
CDK9-203ENST00000480353 PHKA2P46019 1235 aa17.09■□□□□ 0.33
CDK9-203ENST00000480353 LAMTOR4Q0VGL1 99 aa17.09■□□□□ 0.33
CDK9-203ENST00000480353 MXD4Q14582 209 aaPredicted RBP17.09■□□□□ 0.33
CDK9-203ENST00000480353 PUS10Q3MIT2 529 aaKnown RBP17.09■□□□□ 0.33
CDK9-203ENST00000480353 MCTP1Q6DN14 999 aa17.09■□□□□ 0.33
CDK9-203ENST00000480353 SRGAP1Q7Z6B7 1085 aa17.09■□□□□ 0.33
CDK9-203ENST00000480353 COLGALT1Q8NBJ5 622 aa17.09■□□□□ 0.33
CDK9-203ENST00000480353 RNF149Q8NC42 400 aa17.09■□□□□ 0.33
CDK9-203ENST00000480353 SPPL3Q8TCT6 385 aa17.09■□□□□ 0.33
CDK9-203ENST00000480353 HELQQ8TDG4 1101 aa17.09■□□□□ 0.33
CDK9-203ENST00000480353 PABPC5Q96DU9 382 aaKnown RBP17.09■□□□□ 0.33
CDK9-203ENST00000480353 MTMR9Q96QG7 549 aa17.09■□□□□ 0.33
CDK9-203ENST00000480353 MRPL9Q9BYD2 267 aaKnown RBP17.09■□□□□ 0.33
CDK9-203ENST00000480353 ANKEF1Q9NU02 776 aa17.09■□□□□ 0.33
CDK9-203ENST00000480353 PUF60Q9UHX1 559 aaKnown RBP17.09■□□□□ 0.33
CDK9-203ENST00000480353 CUL9Q8IWT3 2517 aa17.08■□□□□ 0.33
CDK9-203ENST00000480353 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.08■□□□□ 0.32
CDK9-203ENST00000480353 WNT7AO00755 349 aa17.08■□□□□ 0.32
CDK9-203ENST00000480353 RAB27AP51159 221 aa17.08■□□□□ 0.32
CDK9-203ENST00000480353 KRT17Q04695 432 aa17.08■□□□□ 0.32
CDK9-203ENST00000480353 UBE3AQ05086 875 aa17.08■□□□□ 0.32
CDK9-203ENST00000480353 LEXMQ3ZCV2 418 aa17.08■□□□□ 0.32
CDK9-203ENST00000480353 HAUS3Q68CZ6 603 aa17.08■□□□□ 0.32
CDK9-203ENST00000480353 FERMT3Q86UX7 667 aa17.08■□□□□ 0.32
CDK9-203ENST00000480353 PGBD4Q96DM1 585 aa17.08■□□□□ 0.32
CDK9-203ENST00000480353 ZNF558Q96NG5 402 aa17.08■□□□□ 0.32
CDK9-203ENST00000480353 NECAB3Q96P71 396 aaPredicted RBP17.08■□□□□ 0.32
CDK9-203ENST00000480353 TMEM60Q9H2L4 133 aa17.08■□□□□ 0.32
CDK9-203ENST00000480353 REV3LO60673 3130 aa17.08■□□□□ 0.32
CDK9-203ENST00000480353 H3BQ06 376 aaPredicted RBP17.07■□□□□ 0.32
CDK9-203ENST00000480353 H3BQV1 296 aa17.07■□□□□ 0.32
CDK9-203ENST00000480353 ZBTB39O15060 712 aa17.07■□□□□ 0.32
CDK9-203ENST00000480353 FGF18O76093 207 aa17.07■□□□□ 0.32
CDK9-203ENST00000480353 LYPLA2O95372 231 aa17.07■□□□□ 0.32
CDK9-203ENST00000480353 CA8P35219 290 aa17.07■□□□□ 0.32
CDK9-203ENST00000480353 PPM1AP35813 382 aa17.07■□□□□ 0.32
CDK9-203ENST00000480353 TRAPPC10P48553 1259 aa17.07■□□□□ 0.32
CDK9-203ENST00000480353 MCM2P49736 904 aa17.07■□□□□ 0.32
CDK9-203ENST00000480353 NDUFV1P49821 464 aa17.07■□□□□ 0.32
CDK9-203ENST00000480353 RNASELQ05823 741 aaKnown RBP17.07■□□□□ 0.32
CDK9-203ENST00000480353 BMS1Q14692 1282 aaKnown RBP17.07■□□□□ 0.32
CDK9-203ENST00000480353 LONRF3Q496Y0 759 aa17.07■□□□□ 0.32
CDK9-203ENST00000480353 PTCRAQ6ISU1 281 aaPredicted RBP17.07■□□□□ 0.32
CDK9-203ENST00000480353 PIGOQ8TEQ8 1089 aa17.07■□□□□ 0.32
CDK9-203ENST00000480353 CASD1Q96PB1 797 aa17.07■□□□□ 0.32
CDK9-203ENST00000480353 HSD17B14Q9BPX1 270 aa17.07■□□□□ 0.32
CDK9-203ENST00000480353 RAB34Q9BZG1 259 aa17.07■□□□□ 0.32
CDK9-203ENST00000480353 TUFT1Q9NNX1 390 aa17.07■□□□□ 0.32
CDK9-203ENST00000480353 TLR9Q9NR96 1032 aa17.07■□□□□ 0.32
CDK9-203ENST00000480353 FAM105AQ9NUU6 356 aa17.07■□□□□ 0.32
CDK9-203ENST00000480353 INO80B-WBP1J3KQ70 363 aa17.06■□□□□ 0.32
CDK9-203ENST00000480353 USO1O60763 962 aaKnown RBP17.06■□□□□ 0.32
CDK9-203ENST00000480353 GLB1LQ6UWU2 654 aa17.06■□□□□ 0.32
CDK9-203ENST00000480353 URGCPQ8TCY9 931 aa17.06■□□□□ 0.32
CDK9-203ENST00000480353 RSPH1Q8WYR4 309 aa17.06■□□□□ 0.32
CDK9-203ENST00000480353 NACC1Q96RE7 527 aa17.06■□□□□ 0.32
CDK9-203ENST00000480353 CWH43Q9H720 699 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms