RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 NPR3P17342 541 aa18.2■□□□□ 0.5
DDX56-210ENST00000479440 RFX1P22670 979 aa18.2■□□□□ 0.5
DDX56-210ENST00000479440 GPR149Q86SP6 731 aa18.2■□□□□ 0.5
DDX56-210ENST00000479440 SIX5Q8N196 739 aa18.2■□□□□ 0.5
DDX56-210ENST00000479440 KCNG4Q8TDN1 519 aa18.2■□□□□ 0.5
DDX56-210ENST00000479440 AUTS2Q8WXX7 1259 aa18.2■□□□□ 0.5
DDX56-210ENST00000479440 EMILIN2Q9BXX0 1053 aa18.2■□□□□ 0.5
DDX56-210ENST00000479440 LRRC2Q9BYS8 371 aa18.2■□□□□ 0.5
DDX56-210ENST00000479440 SAMM50Q9Y512 469 aa18.2■□□□□ 0.5
DDX56-210ENST00000479440 WDR64B1ANS9 1081 aa18.19■□□□□ 0.5
DDX56-210ENST00000479440 LMNAP02545 664 aaKnown RBP18.19■□□□□ 0.5
DDX56-210ENST00000479440 OATP04181 439 aa18.19■□□□□ 0.5
DDX56-210ENST00000479440 CYP3A4P08684 503 aa18.19■□□□□ 0.5
DDX56-210ENST00000479440 RTN1Q16799 776 aa18.19■□□□□ 0.5
DDX56-210ENST00000479440 KANK3Q6NY19 840 aa18.19■□□□□ 0.5
DDX56-210ENST00000479440 APOA5Q6Q788 366 aa18.19■□□□□ 0.5
DDX56-210ENST00000479440 EVPLQ92817 2033 aa18.19■□□□□ 0.5
DDX56-210ENST00000479440 IGSF21Q96ID5 467 aa18.19■□□□□ 0.5
DDX56-210ENST00000479440 CHST12Q9NRB3 414 aa18.19■□□□□ 0.5
DDX56-210ENST00000479440 IGSF9Q9P2J2 1179 aa18.19■□□□□ 0.5
DDX56-210ENST00000479440 SLC27A2O14975 620 aa18.18■□□□□ 0.5
DDX56-210ENST00000479440 PI15O43692 258 aa18.18■□□□□ 0.5
DDX56-210ENST00000479440 FGFR4P22455 802 aa18.18■□□□□ 0.5
DDX56-210ENST00000479440 SFPQP23246 707 aaKnown RBP eCLIP18.18■□□□□ 0.5
DDX56-210ENST00000479440 RNASELQ05823 741 aaKnown RBP18.18■□□□□ 0.5
DDX56-210ENST00000479440 NONOQ15233 471 aaKnown RBP eCLIP18.18■□□□□ 0.5
DDX56-210ENST00000479440 JAKMIP3Q5VZ66 844 aa18.18■□□□□ 0.5
DDX56-210ENST00000479440 GLB1LQ6UWU2 654 aa18.18■□□□□ 0.5
DDX56-210ENST00000479440 C15orf39Q6ZRI6 1047 aa18.18■□□□□ 0.5
DDX56-210ENST00000479440 TMEM173Q86WV6 379 aaPredicted RBP18.18■□□□□ 0.5
DDX56-210ENST00000479440 ZNF668Q96K58 619 aaPredicted RBP18.18■□□□□ 0.5
DDX56-210ENST00000479440 GCOM2Q9BZD3 368 aaPredicted RBP18.18■□□□□ 0.5
DDX56-210ENST00000479440 KCNK12Q9HB15 430 aa18.18■□□□□ 0.5
DDX56-210ENST00000479440 NRBP2Q9NSY0 501 aa18.18■□□□□ 0.5
DDX56-210ENST00000479440 PHKA2P46019 1235 aa18.17■□□□□ 0.5
DDX56-210ENST00000479440 PRKCEQ02156 737 aa18.17■□□□□ 0.5
DDX56-210ENST00000479440 TBC1D8BQ0IIM8 1120 aa18.17■□□□□ 0.5
DDX56-210ENST00000479440 PTPN14Q15678 1187 aa18.17■□□□□ 0.5
DDX56-210ENST00000479440 TWF2Q6IBS0 349 aaKnown RBP18.17■□□□□ 0.5
DDX56-210ENST00000479440 ZC3H14Q6PJT7 736 aaKnown RBP18.17■□□□□ 0.5
DDX56-210ENST00000479440 TRAIPQ9BWF2 469 aa18.17■□□□□ 0.5
DDX56-210ENST00000479440 V9GY48 417 aaPredicted RBP18.17■□□□□ 0.5
DDX56-210ENST00000479440 PTPRZ1P23471 2315 aaPredicted RBP18.16■□□□□ 0.5
DDX56-210ENST00000479440 FAM186AA6NE01 2351 aa18.16■□□□□ 0.5
DDX56-210ENST00000479440 STK25O00506 426 aa18.16■□□□□ 0.5
DDX56-210ENST00000479440 ZBTB43O43298 467 aa18.16■□□□□ 0.5
DDX56-210ENST00000479440 GALTP07902 379 aa18.16■□□□□ 0.5
DDX56-210ENST00000479440 KLRC2P26717 231 aa18.16■□□□□ 0.5
DDX56-210ENST00000479440 RAB27AP51159 221 aa18.16■□□□□ 0.5
DDX56-210ENST00000479440 CLCN4P51793 760 aa18.16■□□□□ 0.5
DDX56-210ENST00000479440 CDC42EP1Q00587 391 aa18.16■□□□□ 0.5
DDX56-210ENST00000479440 LETM2Q2VYF4 491 aa18.16■□□□□ 0.5
DDX56-210ENST00000479440 NOMO2Q5JPE7 1267 aa18.16■□□□□ 0.5
DDX56-210ENST00000479440 ELMSAN1Q6PJG2 1045 aa18.16■□□□□ 0.5
DDX56-210ENST00000479440 DGLUCYQ7Z3D6 616 aa18.16■□□□□ 0.5
DDX56-210ENST00000479440 EXOC6Q8TAG9 804 aa18.16■□□□□ 0.5
DDX56-210ENST00000479440 CRYGNQ8WXF5 182 aa18.16■□□□□ 0.5
DDX56-210ENST00000479440 NRDE2Q9H7Z3 1164 aa18.16■□□□□ 0.5
DDX56-210ENST00000479440 TBC1D13Q9NVG8 400 aa18.16■□□□□ 0.5
DDX56-210ENST00000479440 INPP5FQ9Y2H2 1132 aa18.16■□□□□ 0.5
DDX56-210ENST00000479440 FUT2Q10981 343 aa18.15■□□□□ 0.5
DDX56-210ENST00000479440 COL9A3Q14050 684 aaPredicted RBP18.15■□□□□ 0.5
DDX56-210ENST00000479440 PRR16Q569H4 304 aa18.15■□□□□ 0.5
DDX56-210ENST00000479440 CREB3L3Q68CJ9 461 aa18.15■□□□□ 0.5
DDX56-210ENST00000479440 URGCPQ8TCY9 931 aa18.15■□□□□ 0.5
DDX56-210ENST00000479440 CCDC12Q8WUD4 166 aaPredicted RBP18.15■□□□□ 0.5
DDX56-210ENST00000479440 BCL7CQ8WUZ0 217 aaPredicted RBP18.15■□□□□ 0.5
DDX56-210ENST00000479440 STAMQ92783 540 aa18.15■□□□□ 0.5
DDX56-210ENST00000479440 RMDN1Q96DB5 314 aa18.15■□□□□ 0.5
DDX56-210ENST00000479440 HINFPQ9BQA5 517 aa18.15■□□□□ 0.5
DDX56-210ENST00000479440 INO80BQ9C086 356 aaPredicted RBP18.15■□□□□ 0.5
DDX56-210ENST00000479440 LSG1Q9H089 658 aaKnown RBP18.15■□□□□ 0.5
DDX56-210ENST00000479440 GBP3Q9H0R5 595 aa18.15■□□□□ 0.5
DDX56-210ENST00000479440 WNT16Q9UBV4 365 aa18.15■□□□□ 0.5
DDX56-210ENST00000479440 PIN4Q9Y237 131 aaKnown RBP18.15■□□□□ 0.5
DDX56-210ENST00000479440 MYH9P35579 1960 aaKnown RBP18.15■□□□□ 0.5
DDX56-210ENST00000479440 DCHS1Q96JQ0 3298 aa18.14■□□□□ 0.49
DDX56-210ENST00000479440 ESYT2A0FGR8 921 aa18.14■□□□□ 0.49
DDX56-210ENST00000479440 GOLGA8AA7E2F4 631 aa18.14■□□□□ 0.49
DDX56-210ENST00000479440 GOLGA8BA8MQT2 603 aa18.14■□□□□ 0.49
DDX56-210ENST00000479440 ZNF862O60290 1169 aa18.14■□□□□ 0.49
DDX56-210ENST00000479440 CFHP08603 1231 aa18.14■□□□□ 0.49
DDX56-210ENST00000479440 REXO1Q8N1G1 1221 aaKnown RBP18.14■□□□□ 0.49
DDX56-210ENST00000479440 LPPQ93052 612 aa18.14■□□□□ 0.49
DDX56-210ENST00000479440 PGBD4Q96DM1 585 aa18.14■□□□□ 0.49
DDX56-210ENST00000479440 KLHL5Q96PQ7 755 aa18.14■□□□□ 0.49
DDX56-210ENST00000479440 DISC1Q9NRI5 854 aa18.14■□□□□ 0.49
DDX56-210ENST00000479440 FAM105AQ9NUU6 356 aa18.14■□□□□ 0.49
DDX56-210ENST00000479440 DPP7Q9UHL4 492 aa18.14■□□□□ 0.49
DDX56-210ENST00000479440 SPTBN4Q9H254 2564 aa18.14■□□□□ 0.49
DDX56-210ENST00000479440 NARSO43776 548 aaKnown RBP18.13■□□□□ 0.49
DDX56-210ENST00000479440 SFNP31947 248 aa18.13■□□□□ 0.49
DDX56-210ENST00000479440 GBP2P32456 591 aaPredicted RBP18.13■□□□□ 0.49
DDX56-210ENST00000479440 SLC11A1P49279 550 aa18.13■□□□□ 0.49
DDX56-210ENST00000479440 JAK3P52333 1124 aa18.13■□□□□ 0.49
DDX56-210ENST00000479440 PFKFB3Q16875 520 aaPredicted RBP18.13■□□□□ 0.49
DDX56-210ENST00000479440 CYP26C1Q6V0L0 522 aa18.13■□□□□ 0.49
DDX56-210ENST00000479440 ZNF410Q86VK4 478 aa18.13■□□□□ 0.49
DDX56-210ENST00000479440 CMASQ8NFW8 434 aaPredicted RBP18.13■□□□□ 0.49
DDX56-210ENST00000479440 C6orf50Q9HD87 102 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms