RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 C4orf50Q6ZRC1 276 aa22.85■■□□□ 1.25
SDF4-206ENST00000478938 RASGRP4Q8TDF6 673 aa22.85■■□□□ 1.25
SDF4-206ENST00000478938 PITPNM3Q9BZ71 974 aa22.85■■□□□ 1.25
SDF4-206ENST00000478938 STXBP5LQ9Y2K9 1186 aa22.85■■□□□ 1.25
SDF4-206ENST00000478938 BTNL10A8MVZ5 291 aa22.84■■□□□ 1.25
SDF4-206ENST00000478938 ITGA2BP08514 1039 aa22.84■■□□□ 1.25
SDF4-206ENST00000478938 CCDC166P0CW27 439 aa22.84■■□□□ 1.25
SDF4-206ENST00000478938 MARK3P27448 753 aa22.84■■□□□ 1.25
SDF4-206ENST00000478938 PTK2Q05397 1052 aa22.84■■□□□ 1.25
SDF4-206ENST00000478938 MEX3CQ5U5Q3 659 aaKnown RBP22.84■■□□□ 1.25
SDF4-206ENST00000478938 TOM1L2Q6ZVM7 507 aa22.84■■□□□ 1.25
SDF4-206ENST00000478938 CROCCP2Q86T23 111 aa22.84■■□□□ 1.25
SDF4-206ENST00000478938 TBX10O75333 385 aa22.84■■□□□ 1.25
SDF4-206ENST00000478938 GFPT2O94808 682 aa22.84■■□□□ 1.25
SDF4-206ENST00000478938 FOXN2P32314 431 aa22.84■■□□□ 1.25
SDF4-206ENST00000478938 RCAN1P53805 252 aa22.84■■□□□ 1.25
SDF4-206ENST00000478938 KPNB1Q14974 876 aaKnown RBP22.84■■□□□ 1.25
SDF4-206ENST00000478938 PLBD2Q8NHP8 589 aa22.84■■□□□ 1.25
SDF4-206ENST00000478938 ABTB1Q969K4 478 aaPredicted RBP22.84■■□□□ 1.25
SDF4-206ENST00000478938 KDM4FA0A1W2PPD8 638 aa22.83■■□□□ 1.25
SDF4-206ENST00000478938 TMEM221A6NGB7 291 aa22.83■■□□□ 1.25
SDF4-206ENST00000478938 FAM196BA6NMK8 535 aa22.83■■□□□ 1.25
SDF4-206ENST00000478938 GSG1L2A8MUP6 293 aa22.83■■□□□ 1.25
SDF4-206ENST00000478938 RPL21P46778 160 aaKnown RBP22.83■■□□□ 1.25
SDF4-206ENST00000478938 LRRC55Q6ZSA7 311 aa22.83■■□□□ 1.25
SDF4-206ENST00000478938 NT5DC3Q86UY8 548 aa22.83■■□□□ 1.25
SDF4-206ENST00000478938 CCDC25Q86WR0 208 aa22.83■■□□□ 1.25
SDF4-206ENST00000478938 RNF168Q8IYW5 571 aaPredicted RBP22.83■■□□□ 1.25
SDF4-206ENST00000478938 SNRNP27Q8WVK2 155 aaKnown RBP22.83■■□□□ 1.25
SDF4-206ENST00000478938 LENG1Q96BZ8 264 aaPredicted RBP22.83■■□□□ 1.25
SDF4-206ENST00000478938 AGBL1Q96MI9 1066 aa22.83■■□□□ 1.25
SDF4-206ENST00000478938 MIPEPQ99797 713 aa22.83■■□□□ 1.25
SDF4-206ENST00000478938 SUCLA2Q9P2R7 463 aaPredicted RBP22.83■■□□□ 1.25
SDF4-206ENST00000478938 LTN1O94822 1766 aa22.83■■□□□ 1.25
SDF4-206ENST00000478938 FAM205AQ6ZU69 1335 aa22.83■■□□□ 1.24
SDF4-206ENST00000478938 TAC1P20366 129 aa22.83■■□□□ 1.24
SDF4-206ENST00000478938 PLOD1Q02809 727 aaPredicted RBP22.83■■□□□ 1.24
SDF4-206ENST00000478938 MKRN3Q13064 507 aaKnown RBP22.83■■□□□ 1.24
SDF4-206ENST00000478938 SEC23AQ15436 765 aa22.83■■□□□ 1.24
SDF4-206ENST00000478938 CNNM4Q6P4Q7 775 aa22.83■■□□□ 1.24
SDF4-206ENST00000478938 CENPKQ9BS16 269 aa22.83■■□□□ 1.24
SDF4-206ENST00000478938 AMOTL2Q9Y2J4 779 aa22.83■■□□□ 1.24
SDF4-206ENST00000478938 SMIM22K7EJ46 135 aa22.82■■□□□ 1.24
SDF4-206ENST00000478938 EYA4O95677 639 aa22.82■■□□□ 1.24
SDF4-206ENST00000478938 SLC34A1Q06495 639 aa22.82■■□□□ 1.24
SDF4-206ENST00000478938 RASA3Q14644 834 aa22.82■■□□□ 1.24
SDF4-206ENST00000478938 ACSBG2Q5FVE4 666 aa22.82■■□□□ 1.24
SDF4-206ENST00000478938 DCAF12L1Q5VU92 463 aa22.82■■□□□ 1.24
SDF4-206ENST00000478938 TCERG1LQ5VWI1 586 aa22.82■■□□□ 1.24
SDF4-206ENST00000478938 DUS1LQ6P1R4 473 aaKnown RBP22.82■■□□□ 1.24
SDF4-206ENST00000478938 HS2ST1Q7LGA3 356 aa22.82■■□□□ 1.24
SDF4-206ENST00000478938 ZNF571Q7Z3V5 609 aaPredicted RBP22.82■■□□□ 1.24
SDF4-206ENST00000478938 KRT82Q9NSB4 513 aa22.82■■□□□ 1.24
SDF4-206ENST00000478938 SIPA1L3O60292 1781 aaPredicted RBP22.82■■□□□ 1.24
SDF4-206ENST00000478938 RTL9Q8NET4 1388 aa22.82■■□□□ 1.24
SDF4-206ENST00000478938 MAP3K7O43318 606 aa22.82■■□□□ 1.24
SDF4-206ENST00000478938 HNRNPCP07910 306 aaKnown RBP eCLIP22.82■■□□□ 1.24
SDF4-206ENST00000478938 BRAFP15056 766 aa22.82■■□□□ 1.24
SDF4-206ENST00000478938 ZNF24P17028 368 aa22.82■■□□□ 1.24
SDF4-206ENST00000478938 ZNF184Q99676 751 aaPredicted RBP22.82■■□□□ 1.24
SDF4-206ENST00000478938 AKAP11Q9UKA4 1901 aa22.82■■□□□ 1.24
SDF4-206ENST00000478938 SUPT3HO75486 399 aa22.81■■□□□ 1.24
SDF4-206ENST00000478938 YARSP54577 528 aaKnown RBP22.81■■□□□ 1.24
SDF4-206ENST00000478938 AP1B1Q10567 949 aa22.81■■□□□ 1.24
SDF4-206ENST00000478938 ZNF211Q13398 564 aaPredicted RBP22.81■■□□□ 1.24
SDF4-206ENST00000478938 ARMCX6Q7L4S7 300 aa22.81■■□□□ 1.24
SDF4-206ENST00000478938 SPATA24Q86W54 205 aa22.81■■□□□ 1.24
SDF4-206ENST00000478938 RIBC1Q8N443 379 aaPredicted RBP22.81■■□□□ 1.24
SDF4-206ENST00000478938 SLC35B4Q969S0 331 aa22.81■■□□□ 1.24
SDF4-206ENST00000478938 DNAJC1Q96KC8 554 aaKnown RBP22.81■■□□□ 1.24
SDF4-206ENST00000478938 MAGEB18Q96M61 343 aa22.81■■□□□ 1.24
SDF4-206ENST00000478938 A0A0J9YVX5 310 aa22.81■■□□□ 1.24
SDF4-206ENST00000478938 FAM170AA1A519 330 aa22.81■■□□□ 1.24
SDF4-206ENST00000478938 KRT13P13646 458 aa22.81■■□□□ 1.24
SDF4-206ENST00000478938 ZRSR2Q15696 482 aaKnown RBP22.81■■□□□ 1.24
SDF4-206ENST00000478938 PPFIBP2Q8ND30 876 aa22.81■■□□□ 1.24
SDF4-206ENST00000478938 STKLD1Q8NE28 680 aa22.81■■□□□ 1.24
SDF4-206ENST00000478938 NAT14Q8WUY8 206 aa22.81■■□□□ 1.24
SDF4-206ENST00000478938 C18orf8Q96DM3 657 aa22.81■■□□□ 1.24
SDF4-206ENST00000478938 CCSER1Q9C0I3 900 aa22.81■■□□□ 1.24
SDF4-206ENST00000478938 ARMCX3Q9UH62 379 aaPredicted RBP22.81■■□□□ 1.24
SDF4-206ENST00000478938 FLT1P17948 1338 aa22.8■■□□□ 1.24
SDF4-206ENST00000478938 PASKQ96RG2 1323 aa22.8■■□□□ 1.24
SDF4-206ENST00000478938 PITPNM2Q9BZ72 1349 aa22.8■■□□□ 1.24
SDF4-206ENST00000478938 ACSL3O95573 720 aa22.8■■□□□ 1.24
SDF4-206ENST00000478938 CDK7P50613 346 aa22.8■■□□□ 1.24
SDF4-206ENST00000478938 EXOC3L4Q17RC7 722 aa22.8■■□□□ 1.24
SDF4-206ENST00000478938 KSR1Q8IVT5 923 aa22.8■■□□□ 1.24
SDF4-206ENST00000478938 SPOCK2Q92563 424 aa22.8■■□□□ 1.24
SDF4-206ENST00000478938 HES6Q96HZ4 224 aa22.8■■□□□ 1.24
SDF4-206ENST00000478938 CLMNQ96JQ2 1002 aa22.8■■□□□ 1.24
SDF4-206ENST00000478938 C7orf25Q9BPX7 421 aa22.8■■□□□ 1.24
SDF4-206ENST00000478938 ASCC2Q9H1I8 757 aaPredicted RBP22.8■■□□□ 1.24
SDF4-206ENST00000478938 TUBGCP4Q9UGJ1 667 aa22.8■■□□□ 1.24
SDF4-206ENST00000478938 SUGT1Q9Y2Z0 365 aa22.8■■□□□ 1.24
SDF4-206ENST00000478938 PPP1R2P41236 205 aa22.8■■□□□ 1.24
SDF4-206ENST00000478938 MAPK7Q13164 816 aa22.8■■□□□ 1.24
SDF4-206ENST00000478938 TTLL12Q14166 644 aaPredicted RBP22.8■■□□□ 1.24
SDF4-206ENST00000478938 SLFN11Q7Z7L1 901 aa22.8■■□□□ 1.24
SDF4-206ENST00000478938 ARL10Q8N8L6 244 aa22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms