RNA–Protein interactions for RNA: ENST00000478746.1

VIM-204, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 757 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-204ENST00000478746 SMAP1Q8IYB5 467 aaPredicted RBP19.44■□□□□ 0.7
VIM-204ENST00000478746 LINC01465Q8N7H1 131 aa19.44■□□□□ 0.7
VIM-204ENST00000478746 EXOC6Q8TAG9 804 aa19.44■□□□□ 0.7
VIM-204ENST00000478746 KCNG4Q8TDN1 519 aa19.44■□□□□ 0.7
VIM-204ENST00000478746 FAM167AQ96KS9 214 aa19.44■□□□□ 0.7
VIM-204ENST00000478746 NRBP2Q9NSY0 501 aa19.44■□□□□ 0.7
VIM-204ENST00000478746 RBM28Q9NW13 759 aaKnown RBP19.44■□□□□ 0.7
VIM-204ENST00000478746 CNTNAP5Q8WYK1 1306 aa19.44■□□□□ 0.7
VIM-204ENST00000478746 EP300Q09472 2414 aaPredicted RBP19.43■□□□□ 0.7
VIM-204ENST00000478746 ZNF292O60281 2723 aa19.43■□□□□ 0.7
VIM-204ENST00000478746 CARNS1A5YM72 827 aa19.43■□□□□ 0.7
VIM-204ENST00000478746 SPDYE4A6NLX3 237 aa19.43■□□□□ 0.7
VIM-204ENST00000478746 hCG_1984214I3L0E3 225 aa19.43■□□□□ 0.7
VIM-204ENST00000478746 CYP3A4P08684 503 aa19.43■□□□□ 0.7
VIM-204ENST00000478746 GPC3P51654 580 aa19.43■□□□□ 0.7
VIM-204ENST00000478746 CCDC149Q6ZUS6 474 aa19.43■□□□□ 0.7
VIM-204ENST00000478746 GPR149Q86SP6 731 aa19.43■□□□□ 0.7
VIM-204ENST00000478746 SIX5Q8N196 739 aa19.43■□□□□ 0.7
VIM-204ENST00000478746 ZNF713Q8N859 430 aaPredicted RBP19.43■□□□□ 0.7
VIM-204ENST00000478746 IGSF21Q96ID5 467 aa19.43■□□□□ 0.7
VIM-204ENST00000478746 KCNK12Q9HB15 430 aa19.43■□□□□ 0.7
VIM-204ENST00000478746 BARHL2Q9NY43 387 aa19.43■□□□□ 0.7
VIM-204ENST00000478746 DUSP12Q9UNI6 340 aa19.43■□□□□ 0.7
VIM-204ENST00000478746 SAMM50Q9Y512 469 aa19.43■□□□□ 0.7
VIM-204ENST00000478746 STK25O00506 426 aa19.42■□□□□ 0.7
VIM-204ENST00000478746 SLC27A2O14975 620 aa19.42■□□□□ 0.7
VIM-204ENST00000478746 TMEM173Q86WV6 379 aaPredicted RBP19.42■□□□□ 0.7
VIM-204ENST00000478746 FEZF2Q8TBJ5 459 aa19.42■□□□□ 0.7
VIM-204ENST00000478746 NLRP7Q8WX94 980 aa19.42■□□□□ 0.7
VIM-204ENST00000478746 RSPH1Q8WYR4 309 aa19.42■□□□□ 0.7
VIM-204ENST00000478746 SEMA4AQ9H3S1 761 aa19.42■□□□□ 0.7
VIM-204ENST00000478746 SFXN1Q9H9B4 322 aa19.42■□□□□ 0.7
VIM-204ENST00000478746 CHST12Q9NRB3 414 aa19.42■□□□□ 0.7
VIM-204ENST00000478746 CACNA1AO00555 2505 aa19.41■□□□□ 0.7
VIM-204ENST00000478746 CSDE1O75534 798 aaKnown RBP19.41■□□□□ 0.7
VIM-204ENST00000478746 GALTP07902 379 aa19.41■□□□□ 0.7
VIM-204ENST00000478746 FUT2Q10981 343 aa19.41■□□□□ 0.7
VIM-204ENST00000478746 RTN1Q16799 776 aa19.41■□□□□ 0.7
VIM-204ENST00000478746 NRDE2Q9H7Z3 1164 aa19.41■□□□□ 0.7
VIM-204ENST00000478746 LMNAP02545 664 aaKnown RBP19.4■□□□□ 0.7
VIM-204ENST00000478746 OATP04181 439 aa19.4■□□□□ 0.7
VIM-204ENST00000478746 KLRC2P26717 231 aa19.4■□□□□ 0.7
VIM-204ENST00000478746 PHKA2P46019 1235 aa19.4■□□□□ 0.7
VIM-204ENST00000478746 SETQ01105 290 aaPredicted RBP19.4■□□□□ 0.7
VIM-204ENST00000478746 RNASELQ05823 741 aaKnown RBP19.4■□□□□ 0.7
VIM-204ENST00000478746 LONRF3Q496Y0 759 aa19.4■□□□□ 0.7
VIM-204ENST00000478746 APOA5Q6Q788 366 aa19.4■□□□□ 0.7
VIM-204ENST00000478746 CRYGNQ8WXF5 182 aa19.4■□□□□ 0.7
VIM-204ENST00000478746 EMILIN2Q9BXX0 1053 aa19.4■□□□□ 0.7
VIM-204ENST00000478746 GCOM2Q9BZD3 368 aaPredicted RBP19.4■□□□□ 0.7
VIM-204ENST00000478746 IGSF9Q9P2J2 1179 aa19.4■□□□□ 0.7
VIM-204ENST00000478746 ZNF862O60290 1169 aa19.39■□□□□ 0.69
VIM-204ENST00000478746 SKIP12755 728 aa19.39■□□□□ 0.69
VIM-204ENST00000478746 CDC42EP1Q00587 391 aa19.39■□□□□ 0.69
VIM-204ENST00000478746 TBC1D8BQ0IIM8 1120 aa19.39■□□□□ 0.69
VIM-204ENST00000478746 LETM2Q2VYF4 491 aa19.39■□□□□ 0.69
VIM-204ENST00000478746 PRR16Q569H4 304 aa19.39■□□□□ 0.69
VIM-204ENST00000478746 NOMO2Q5JPE7 1267 aa19.39■□□□□ 0.69
VIM-204ENST00000478746 CREB3L3Q68CJ9 461 aa19.39■□□□□ 0.69
VIM-204ENST00000478746 TWF2Q6IBS0 349 aaKnown RBP19.39■□□□□ 0.69
VIM-204ENST00000478746 GLB1LQ6UWU2 654 aa19.39■□□□□ 0.69
VIM-204ENST00000478746 BCL7CQ8WUZ0 217 aaPredicted RBP19.39■□□□□ 0.69
VIM-204ENST00000478746 LPPQ93052 612 aa19.39■□□□□ 0.69
VIM-204ENST00000478746 RMDN1Q96DB5 314 aa19.39■□□□□ 0.69
VIM-204ENST00000478746 KLHL5Q96PQ7 755 aa19.39■□□□□ 0.69
VIM-204ENST00000478746 TRAIPQ9BWF2 469 aa19.39■□□□□ 0.69
VIM-204ENST00000478746 LSG1Q9H089 658 aaKnown RBP19.39■□□□□ 0.69
VIM-204ENST00000478746 TBC1D13Q9NVG8 400 aa19.39■□□□□ 0.69
VIM-204ENST00000478746 WDR64B1ANS9 1081 aa19.38■□□□□ 0.69
VIM-204ENST00000478746 ZBTB43O43298 467 aa19.38■□□□□ 0.69
VIM-204ENST00000478746 RFX1P22670 979 aa19.38■□□□□ 0.69
VIM-204ENST00000478746 PTPN14Q15678 1187 aa19.38■□□□□ 0.69
VIM-204ENST00000478746 DENND4AQ7Z401 1863 aa19.38■□□□□ 0.69
VIM-204ENST00000478746 GBP3Q9H0R5 595 aa19.38■□□□□ 0.69
VIM-204ENST00000478746 DISC1Q9NRI5 854 aa19.38■□□□□ 0.69
VIM-204ENST00000478746 WNT16Q9UBV4 365 aa19.38■□□□□ 0.69
VIM-204ENST00000478746 INPP5FQ9Y2H2 1132 aa19.38■□□□□ 0.69
VIM-204ENST00000478746 DMXL1Q9Y485 3027 aa19.38■□□□□ 0.69
VIM-204ENST00000478746 NARSO43776 548 aaKnown RBP19.37■□□□□ 0.69
VIM-204ENST00000478746 OFD1O75665 1012 aa19.37■□□□□ 0.69
VIM-204ENST00000478746 CFHP08603 1231 aa19.37■□□□□ 0.69
VIM-204ENST00000478746 SLC11A1P49279 550 aa19.37■□□□□ 0.69
VIM-204ENST00000478746 CLCN4P51793 760 aa19.37■□□□□ 0.69
VIM-204ENST00000478746 PRKCEQ02156 737 aa19.37■□□□□ 0.69
VIM-204ENST00000478746 NECTIN1Q15223 517 aa19.37■□□□□ 0.69
VIM-204ENST00000478746 NONOQ15233 471 aaKnown RBP eCLIP19.37■□□□□ 0.69
VIM-204ENST00000478746 C15orf39Q6ZRI6 1047 aa19.37■□□□□ 0.69
VIM-204ENST00000478746 DGLUCYQ7Z3D6 616 aa19.37■□□□□ 0.69
VIM-204ENST00000478746 KIAA2013Q8IYS2 634 aa19.37■□□□□ 0.69
VIM-204ENST00000478746 DNAJB4Q9UDY4 337 aa19.37■□□□□ 0.69
VIM-204ENST00000478746 STK39Q9UEW8 545 aa19.37■□□□□ 0.69
VIM-204ENST00000478746 BRPF3Q9ULD4 1205 aa19.37■□□□□ 0.69
VIM-204ENST00000478746 WDR81Q562E7 1941 aa19.37■□□□□ 0.69
VIM-204ENST00000478746 SSBP05455 408 aaKnown RBP eCLIP19.36■□□□□ 0.69
VIM-204ENST00000478746 CNPP09543 421 aaKnown RBP19.36■□□□□ 0.69
VIM-204ENST00000478746 VN1R3Q9BXE9 311 aa19.36■□□□□ 0.69
VIM-204ENST00000478746 INO80BQ9C086 356 aaPredicted RBP19.36■□□□□ 0.69
VIM-204ENST00000478746 R4GN57 208 aa19.36■□□□□ 0.69
VIM-204ENST00000478746 A0A087WZ62 844 aa19.35■□□□□ 0.69
VIM-204ENST00000478746 MED19A0JLT2 244 aaPredicted RBP19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms