RNA–Protein interactions for RNA: ENST00000478503.6

SH3D19-207, Transcript of SH3 domain containing 19, humanhuman

TSL 2

Gene SH3D19, Length 4,038 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-207ENST00000478503 CHORDC1Q9UHD1 332 aaPredicted RBP6.6□□□□□ -1.35
SH3D19-207ENST00000478503 DDX60LQ5H9U9 1706 aaKnown RBP6.6□□□□□ -1.35
SH3D19-207ENST00000478503 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.6□□□□□ -1.35
SH3D19-207ENST00000478503 MSH4O15457 936 aa6.6□□□□□ -1.35
SH3D19-207ENST00000478503 TLR2O60603 784 aa6.6□□□□□ -1.35
SH3D19-207ENST00000478503 BMP3P12645 472 aa6.6□□□□□ -1.35
SH3D19-207ENST00000478503 FKBP3Q00688 224 aaKnown RBP6.6□□□□□ -1.35
SH3D19-207ENST00000478503 GABPB1Q06547 395 aaPredicted RBP6.6□□□□□ -1.35
SH3D19-207ENST00000478503 PDIA5Q14554 519 aa6.6□□□□□ -1.35
SH3D19-207ENST00000478503 COL19A1Q14993 1142 aa6.6□□□□□ -1.35
SH3D19-207ENST00000478503 LLGL1Q15334 1064 aa6.6□□□□□ -1.35
SH3D19-207ENST00000478503 SYDE2Q5VT97 1194 aa6.6□□□□□ -1.35
SH3D19-207ENST00000478503 PRAMEF18Q5VWM3 479 aa6.6□□□□□ -1.35
SH3D19-207ENST00000478503 HHIPL2Q6UWX4 724 aa6.6□□□□□ -1.35
SH3D19-207ENST00000478503 TRAPPC11Q7Z392 1133 aa6.6□□□□□ -1.35
SH3D19-207ENST00000478503 PODNQ7Z5L7 613 aa6.6□□□□□ -1.35
SH3D19-207ENST00000478503 TRIM74Q86UV6 250 aa6.6□□□□□ -1.35
SH3D19-207ENST00000478503 TRIM73Q86UV7 250 aa6.6□□□□□ -1.35
SH3D19-207ENST00000478503 PGBD3Q8N328 593 aa6.6□□□□□ -1.35
SH3D19-207ENST00000478503 E2F7Q96AV8 911 aa6.6□□□□□ -1.35
SH3D19-207ENST00000478503 PAWRQ96IZ0 340 aaKnown RBP6.6□□□□□ -1.35
SH3D19-207ENST00000478503 PURBQ96QR8 312 aaKnown RBP6.6□□□□□ -1.35
SH3D19-207ENST00000478503 LRRC1Q9BTT6 524 aa6.6□□□□□ -1.35
SH3D19-207ENST00000478503 DONSONQ9NYP3 566 aa6.6□□□□□ -1.35
SH3D19-207ENST00000478503 SUFUQ9UMX1 484 aa6.6□□□□□ -1.35
SH3D19-207ENST00000478503 PVALEFA0A1B0GWK0 134 aa6.59□□□□□ -1.35
SH3D19-207ENST00000478503 CCDC151A5D8V7 595 aa6.59□□□□□ -1.35
SH3D19-207ENST00000478503 LRRN2O75325 713 aa6.59□□□□□ -1.35
SH3D19-207ENST00000478503 VCAM1P19320 739 aa6.59□□□□□ -1.35
SH3D19-207ENST00000478503 TNFAIP3P21580 790 aa6.59□□□□□ -1.35
SH3D19-207ENST00000478503 FECHP22830 423 aa6.59□□□□□ -1.35
SH3D19-207ENST00000478503 CLK2P49760 499 aaKnown RBP6.59□□□□□ -1.35
SH3D19-207ENST00000478503 CYP2J2P51589 502 aa6.59□□□□□ -1.35
SH3D19-207ENST00000478503 SP4Q02446 784 aa6.59□□□□□ -1.35
SH3D19-207ENST00000478503 SLC20A2Q08357 652 aa6.59□□□□□ -1.35
SH3D19-207ENST00000478503 EHHADHQ08426 723 aa6.59□□□□□ -1.35
SH3D19-207ENST00000478503 TMEM119Q4V9L6 283 aa6.59□□□□□ -1.35
SH3D19-207ENST00000478503 PPP4R3AQ6IN85 833 aa6.59□□□□□ -1.35
SH3D19-207ENST00000478503 ZDHHC15Q96MV8 337 aa6.59□□□□□ -1.35
SH3D19-207ENST00000478503 SEPT11Q9NVA2 429 aaKnown RBP6.59□□□□□ -1.35
SH3D19-207ENST00000478503 PLAGL2Q9UPG8 496 aa6.59□□□□□ -1.35
SH3D19-207ENST00000478503 DNM3Q9UQ16 869 aa6.59□□□□□ -1.35
SH3D19-207ENST00000478503 RREB1Q92766 1687 aa6.59□□□□□ -1.35
SH3D19-207ENST00000478503 MYH10P35580 1976 aa6.59□□□□□ -1.35
SH3D19-207ENST00000478503 A0A087X0T9 212 aa6.59□□□□□ -1.35
SH3D19-207ENST00000478503 TISP43B9A030 160 aa6.59□□□□□ -1.35
SH3D19-207ENST00000478503 KRT38O76015 456 aa6.59□□□□□ -1.35
SH3D19-207ENST00000478503 FAM228BP0C875 321 aa6.59□□□□□ -1.35
SH3D19-207ENST00000478503 NOP2P46087 812 aaKnown RBP6.59□□□□□ -1.35
SH3D19-207ENST00000478503 CD151P48509 253 aa6.59□□□□□ -1.35
SH3D19-207ENST00000478503 NEK3P51956 506 aa6.59□□□□□ -1.35
SH3D19-207ENST00000478503 VAV2P52735 878 aa6.59□□□□□ -1.35
SH3D19-207ENST00000478503 LMNB2Q03252 620 aa6.59□□□□□ -1.35
SH3D19-207ENST00000478503 KCNH2Q12809 1159 aa6.59□□□□□ -1.35
SH3D19-207ENST00000478503 TRADDQ15628 312 aa6.59□□□□□ -1.35
SH3D19-207ENST00000478503 MEA1Q16626 185 aa6.59□□□□□ -1.35
SH3D19-207ENST00000478503 WHAMMP3Q1A5X7 153 aa6.59□□□□□ -1.35
SH3D19-207ENST00000478503 MYCT1Q8N699 235 aa6.59□□□□□ -1.35
SH3D19-207ENST00000478503 FAM84AQ96KN4 292 aa6.59□□□□□ -1.35
SH3D19-207ENST00000478503 SPAG5Q96R06 1193 aa6.59□□□□□ -1.35
SH3D19-207ENST00000478503 ERGIC2Q96RQ1 377 aa6.59□□□□□ -1.35
SH3D19-207ENST00000478503 FAM53CQ9NYF3 392 aa6.59□□□□□ -1.35
SH3D19-207ENST00000478503 CWC15Q9P013 229 aaKnown RBP6.59□□□□□ -1.35
SH3D19-207ENST00000478503 ADAM21Q9UKJ8 722 aa6.59□□□□□ -1.35
SH3D19-207ENST00000478503 SPDYE2BA6NHP3 402 aa6.59□□□□□ -1.36
SH3D19-207ENST00000478503 SPDYE5A6NIY4 337 aa6.59□□□□□ -1.36
SH3D19-207ENST00000478503 TMEM88BA6NKF7 163 aa6.59□□□□□ -1.36
SH3D19-207ENST00000478503 EIF3CLB5ME19 914 aaKnown RBP6.59□□□□□ -1.36
SH3D19-207ENST00000478503 OPLAHO14841 1288 aa6.59□□□□□ -1.36
SH3D19-207ENST00000478503 USO1O60763 962 aaKnown RBP6.59□□□□□ -1.36
SH3D19-207ENST00000478503 SPDYE6P0CI01 402 aa6.59□□□□□ -1.36
SH3D19-207ENST00000478503 SPATA31C1P0DKV0 1188 aa6.59□□□□□ -1.36
SH3D19-207ENST00000478503 CAPN2P17655 700 aa6.59□□□□□ -1.36
SH3D19-207ENST00000478503 FAPQ12884 760 aa6.59□□□□□ -1.36
SH3D19-207ENST00000478503 KIAA0753Q2KHM9 967 aa6.59□□□□□ -1.36
SH3D19-207ENST00000478503 SPDYE2Q495Y8 402 aa6.59□□□□□ -1.36
SH3D19-207ENST00000478503 ADAT2Q7Z6V5 191 aaKnown RBP6.59□□□□□ -1.36
SH3D19-207ENST00000478503 IFT81Q8WYA0 676 aa6.59□□□□□ -1.36
SH3D19-207ENST00000478503 BAP1Q92560 729 aa6.59□□□□□ -1.36
SH3D19-207ENST00000478503 DYDC2Q96IM9 177 aa6.59□□□□□ -1.36
SH3D19-207ENST00000478503 EIF3CQ99613 913 aaKnown RBP6.59□□□□□ -1.36
SH3D19-207ENST00000478503 NUP58Q9BVL2 599 aa6.59□□□□□ -1.36
SH3D19-207ENST00000478503 NACA2Q9H009 215 aa6.59□□□□□ -1.36
SH3D19-207ENST00000478503 ABCG4Q9H172 646 aa6.59□□□□□ -1.36
SH3D19-207ENST00000478503 NEUROD4Q9HD90 331 aa6.59□□□□□ -1.36
SH3D19-207ENST00000478503 SAMM50Q9Y512 469 aa6.59□□□□□ -1.36
SH3D19-207ENST00000478503 CEP350Q5VT06 3117 aa6.58□□□□□ -1.36
SH3D19-207ENST00000478503 CASZ1Q86V15 1759 aa6.58□□□□□ -1.36
SH3D19-207ENST00000478503 ADAMTSL1Q8N6G6 1762 aa6.58□□□□□ -1.36
SH3D19-207ENST00000478503 KLRG2A4D1S0 409 aaPredicted RBP6.58□□□□□ -1.36
SH3D19-207ENST00000478503 H3BRB1 525 aa6.58□□□□□ -1.36
SH3D19-207ENST00000478503 PSMD14O00487 310 aa6.58□□□□□ -1.36
SH3D19-207ENST00000478503 TACC1O75410 805 aa6.58□□□□□ -1.36
SH3D19-207ENST00000478503 ERLIN1O75477 346 aa6.58□□□□□ -1.36
SH3D19-207ENST00000478503 AKAP3O75969 853 aa6.58□□□□□ -1.36
SH3D19-207ENST00000478503 NOL4O94818 638 aa6.58□□□□□ -1.36
SH3D19-207ENST00000478503 FGFR1OPO95684 399 aaKnown RBP6.58□□□□□ -1.36
SH3D19-207ENST00000478503 VIMP08670 466 aaKnown RBP6.58□□□□□ -1.36
SH3D19-207ENST00000478503 TRIM49P0CI25 452 aa6.58□□□□□ -1.36
SH3D19-207ENST00000478503 TRIM49CP0CI26 452 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms