RNA–Protein interactions for RNA: ENST00000478169.5

CCM2-210, Transcript of CCM2 scaffold protein, humanhuman

TSL 4

Gene CCM2, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-210ENST00000478169 PLCD3Q8N3E9 789 aa10.9□□□□□ -0.66
CCM2-210ENST00000478169 LRRC71Q8N4P6 559 aa10.9□□□□□ -0.66
CCM2-210ENST00000478169 BICD2Q8TD16 824 aa10.9□□□□□ -0.66
CCM2-210ENST00000478169 HELQQ8TDG4 1101 aa10.9□□□□□ -0.66
CCM2-210ENST00000478169 LENG9Q96B70 501 aa10.9□□□□□ -0.66
CCM2-210ENST00000478169 TMEM169Q96HH4 297 aa10.9□□□□□ -0.66
CCM2-210ENST00000478169 TRAIPQ9BWF2 469 aa10.9□□□□□ -0.66
CCM2-210ENST00000478169 DISC1Q9NRI5 854 aa10.9□□□□□ -0.66
CCM2-210ENST00000478169 DZANK1Q9NVP4 752 aa10.9□□□□□ -0.66
CCM2-210ENST00000478169 USTQ9Y2C2 406 aa10.9□□□□□ -0.66
CCM2-210ENST00000478169 IRAK3Q9Y616 596 aa10.9□□□□□ -0.66
CCM2-210ENST00000478169 PRPF3O43395 683 aaKnown RBP10.89□□□□□ -0.67
CCM2-210ENST00000478169 ZNF862O60290 1169 aa10.89□□□□□ -0.67
CCM2-210ENST00000478169 SKIP12755 728 aa10.89□□□□□ -0.67
CCM2-210ENST00000478169 METAP2P50579 478 aaKnown RBP eCLIP10.89□□□□□ -0.67
CCM2-210ENST00000478169 JAK3P52333 1124 aa10.89□□□□□ -0.67
CCM2-210ENST00000478169 PRKCEQ02156 737 aa10.89□□□□□ -0.67
CCM2-210ENST00000478169 KIAA1841Q6NSI8 718 aa10.89□□□□□ -0.67
CCM2-210ENST00000478169 DDX53Q86TM3 631 aaKnown RBP10.89□□□□□ -0.67
CCM2-210ENST00000478169 RASEFQ8IZ41 740 aa10.89□□□□□ -0.67
CCM2-210ENST00000478169 TMEM87AQ8NBN3 555 aa10.89□□□□□ -0.67
CCM2-210ENST00000478169 NLRP7Q8WX94 980 aa10.89□□□□□ -0.67
CCM2-210ENST00000478169 SCLT1Q96NL6 688 aa10.89□□□□□ -0.67
CCM2-210ENST00000478169 RIT2Q99578 217 aa10.89□□□□□ -0.67
CCM2-210ENST00000478169 GCOM2Q9BZD3 368 aaPredicted RBP10.89□□□□□ -0.67
CCM2-210ENST00000478169 ZBP1Q9H171 429 aa10.89□□□□□ -0.67
CCM2-210ENST00000478169 CDH22Q9UJ99 828 aa10.89□□□□□ -0.67
CCM2-210ENST00000478169 C2orf16Q68DN1 1984 aa10.88□□□□□ -0.67
CCM2-210ENST00000478169 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.88□□□□□ -0.67
CCM2-210ENST00000478169 NT5C1B-RDH14C9J2C7 533 aa10.88□□□□□ -0.67
CCM2-210ENST00000478169 ADAMTS3O15072 1205 aa10.88□□□□□ -0.67
CCM2-210ENST00000478169 MSH4O15457 936 aa10.88□□□□□ -0.67
CCM2-210ENST00000478169 CTSAP10619 480 aa10.88□□□□□ -0.67
CCM2-210ENST00000478169 CA8P35219 290 aa10.88□□□□□ -0.67
CCM2-210ENST00000478169 NBL1P41271 181 aa10.88□□□□□ -0.67
CCM2-210ENST00000478169 PHKA2P46019 1235 aa10.88□□□□□ -0.67
CCM2-210ENST00000478169 USP11P51784 963 aa10.88□□□□□ -0.67
CCM2-210ENST00000478169 CLCN5P51795 746 aa10.88□□□□□ -0.67
CCM2-210ENST00000478169 FGD1P98174 961 aa10.88□□□□□ -0.67
CCM2-210ENST00000478169 FOXK2Q01167 660 aa10.88□□□□□ -0.67
CCM2-210ENST00000478169 TARBP2Q15633 366 aaKnown RBP10.88□□□□□ -0.67
CCM2-210ENST00000478169 BMP2KLQ5H9B9 411 aa10.88□□□□□ -0.67
CCM2-210ENST00000478169 RARS2Q5T160 578 aaKnown RBP10.88□□□□□ -0.67
CCM2-210ENST00000478169 ASTLQ6HA08 431 aaPredicted RBP10.88□□□□□ -0.67
CCM2-210ENST00000478169 PPFIBP1Q86W92 1011 aa10.88□□□□□ -0.67
CCM2-210ENST00000478169 VPS52Q8N1B4 723 aa10.88□□□□□ -0.67
CCM2-210ENST00000478169 TDRD5Q8NAT2 981 aaKnown RBP10.88□□□□□ -0.67
CCM2-210ENST00000478169 CCDC148Q8NFR7 591 aa10.88□□□□□ -0.67
CCM2-210ENST00000478169 RDM1Q8NG50 284 aa10.88□□□□□ -0.67
CCM2-210ENST00000478169 IGSF21Q96ID5 467 aa10.88□□□□□ -0.67
CCM2-210ENST00000478169 ZNF668Q96K58 619 aaPredicted RBP10.88□□□□□ -0.67
CCM2-210ENST00000478169 NIFKQ9BYG3 293 aaKnown RBP10.88□□□□□ -0.67
CCM2-210ENST00000478169 INO80BQ9C086 356 aaPredicted RBP10.88□□□□□ -0.67
CCM2-210ENST00000478169 STK39Q9UEW8 545 aa10.88□□□□□ -0.67
CCM2-210ENST00000478169 DBR1Q9UK59 544 aaKnown RBP10.88□□□□□ -0.67
CCM2-210ENST00000478169 NAP1L2Q9ULW6 460 aaPredicted RBP10.88□□□□□ -0.67
CCM2-210ENST00000478169 NID2Q14112 1375 aa10.88□□□□□ -0.67
CCM2-210ENST00000478169 MTCL1Q9Y4B5 1905 aaKnown RBP10.88□□□□□ -0.67
CCM2-210ENST00000478169 IGKV6-21A0A0C4DH24 114 aa10.87□□□□□ -0.67
CCM2-210ENST00000478169 GAS7O60861 476 aa10.87□□□□□ -0.67
CCM2-210ENST00000478169 ZNF623O75123 536 aa10.87□□□□□ -0.67
CCM2-210ENST00000478169 ZC3H11AO75152 810 aaKnown RBP eCLIP10.87□□□□□ -0.67
CCM2-210ENST00000478169 FGFR4P22455 802 aa10.87□□□□□ -0.67
CCM2-210ENST00000478169 SFPQP23246 707 aaKnown RBP eCLIP10.87□□□□□ -0.67
CCM2-210ENST00000478169 DNM2P50570 870 aa10.87□□□□□ -0.67
CCM2-210ENST00000478169 RAB27AP51159 221 aa10.87□□□□□ -0.67
CCM2-210ENST00000478169 AKAP17AQ02040 695 aaKnown RBP10.87□□□□□ -0.67
CCM2-210ENST00000478169 UGCGQ16739 394 aa10.87□□□□□ -0.67
CCM2-210ENST00000478169 ZNF410Q86VK4 478 aa10.87□□□□□ -0.67
CCM2-210ENST00000478169 TMEM105Q8N8V8 129 aa10.87□□□□□ -0.67
CCM2-210ENST00000478169 SLC22A17Q8WUG5 538 aa10.87□□□□□ -0.67
CCM2-210ENST00000478169 SLC5A5Q92911 643 aa10.87□□□□□ -0.67
CCM2-210ENST00000478169 CCDC136Q96JN2 1154 aa10.87□□□□□ -0.67
CCM2-210ENST00000478169 TEKT3Q9BXF9 490 aa10.87□□□□□ -0.67
CCM2-210ENST00000478169 CYP26B1Q9NR63 512 aa10.87□□□□□ -0.67
CCM2-210ENST00000478169 LIMD1Q9UGP4 676 aa10.87□□□□□ -0.67
CCM2-210ENST00000478169 CHMP2AO43633 222 aa10.86□□□□□ -0.67
CCM2-210ENST00000478169 EDIL3O43854 480 aa10.86□□□□□ -0.67
CCM2-210ENST00000478169 CSDE1O75534 798 aaKnown RBP10.86□□□□□ -0.67
CCM2-210ENST00000478169 ASGR2P07307 311 aa10.86□□□□□ -0.67
CCM2-210ENST00000478169 GALTP07902 379 aa10.86□□□□□ -0.67
CCM2-210ENST00000478169 WEE2P0C1S8 567 aa10.86□□□□□ -0.67
CCM2-210ENST00000478169 EPCAMP16422 314 aa10.86□□□□□ -0.67
CCM2-210ENST00000478169 DRP2Q13474 957 aa10.86□□□□□ -0.67
CCM2-210ENST00000478169 XKR3Q5GH77 459 aa10.86□□□□□ -0.67
CCM2-210ENST00000478169 NOMO2Q5JPE7 1267 aa10.86□□□□□ -0.67
CCM2-210ENST00000478169 LRCH2Q5VUJ6 765 aa10.86□□□□□ -0.67
CCM2-210ENST00000478169 TWF2Q6IBS0 349 aaKnown RBP10.86□□□□□ -0.67
CCM2-210ENST00000478169 POTEHQ6S545 545 aa10.86□□□□□ -0.67
CCM2-210ENST00000478169 GLB1LQ6UWU2 654 aa10.86□□□□□ -0.67
CCM2-210ENST00000478169 Q6ZUG5 572 aa10.86□□□□□ -0.67
CCM2-210ENST00000478169 MIER3Q7Z3K6 550 aa10.86□□□□□ -0.67
CCM2-210ENST00000478169 CABP7Q86V35 215 aa10.86□□□□□ -0.67
CCM2-210ENST00000478169 TMEM173Q86WV6 379 aaPredicted RBP10.86□□□□□ -0.67
CCM2-210ENST00000478169 FBXL16Q8N461 479 aa10.86□□□□□ -0.67
CCM2-210ENST00000478169 C12orf76Q8N812 135 aaPredicted RBP10.86□□□□□ -0.67
CCM2-210ENST00000478169 ACSF2Q96CM8 615 aaPredicted RBP10.86□□□□□ -0.67
CCM2-210ENST00000478169 CEP89Q96ST8 783 aa10.86□□□□□ -0.67
CCM2-210ENST00000478169 RNF26Q9BY78 433 aaPredicted RBP10.86□□□□□ -0.67
CCM2-210ENST00000478169 C22orf23Q9BZE7 217 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms