RNA–Protein interactions for RNA: ENST00000477531.3

CLDN11-204, Transcript of claudin 11, humanhuman

TSL 3

Gene CLDN11, Length 1,065 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-204ENST00000477531 TNFRSF25Q93038 417 aa17.58■□□□□ 0.4
CLDN11-204ENST00000477531 DYDC2Q96IM9 177 aa17.58■□□□□ 0.4
CLDN11-204ENST00000477531 NLRP4Q96MN2 994 aa17.58■□□□□ 0.4
CLDN11-204ENST00000477531 C1QTNF1Q9BXJ1 281 aa17.58■□□□□ 0.4
CLDN11-204ENST00000477531 PUF60Q9UHX1 559 aaKnown RBP17.58■□□□□ 0.4
CLDN11-204ENST00000477531 NEMFO60524 1076 aa17.57■□□□□ 0.4
CLDN11-204ENST00000477531 CSDE1O75534 798 aaKnown RBP17.57■□□□□ 0.4
CLDN11-204ENST00000477531 FGF18O76093 207 aa17.57■□□□□ 0.4
CLDN11-204ENST00000477531 IL9P15248 144 aa17.57■□□□□ 0.4
CLDN11-204ENST00000477531 DNAJB1P25685 340 aa17.57■□□□□ 0.4
CLDN11-204ENST00000477531 SSTR3P32745 418 aaPredicted RBP17.57■□□□□ 0.4
CLDN11-204ENST00000477531 NDUFV1P49821 464 aa17.57■□□□□ 0.4
CLDN11-204ENST00000477531 CAMK1Q14012 370 aa17.57■□□□□ 0.4
CLDN11-204ENST00000477531 CTC1Q2NKJ3 1217 aa17.57■□□□□ 0.4
CLDN11-204ENST00000477531 XKR9Q5GH70 373 aa17.57■□□□□ 0.4
CLDN11-204ENST00000477531 PDE12Q6L8Q7 609 aaKnown RBP17.57■□□□□ 0.4
CLDN11-204ENST00000477531 TPH2Q8IWU9 490 aa17.57■□□□□ 0.4
CLDN11-204ENST00000477531 FAM178BQ8IXR5 827 aa17.57■□□□□ 0.4
CLDN11-204ENST00000477531 ZSCAN31Q96LW9 406 aaPredicted RBP17.57■□□□□ 0.4
CLDN11-204ENST00000477531 CCDC43Q96MW1 224 aaKnown RBP17.57■□□□□ 0.4
CLDN11-204ENST00000477531 CASD1Q96PB1 797 aa17.57■□□□□ 0.4
CLDN11-204ENST00000477531 TLR9Q9NR96 1032 aa17.57■□□□□ 0.4
CLDN11-204ENST00000477531 RGL1Q9NZL6 768 aa17.57■□□□□ 0.4
CLDN11-204ENST00000477531 PIN4Q9Y237 131 aaKnown RBP17.57■□□□□ 0.4
CLDN11-204ENST00000477531 COL4A3BPQ9Y5P4 624 aa17.57■□□□□ 0.4
CLDN11-204ENST00000477531 FSD2A1L4K1 749 aa17.56■□□□□ 0.4
CLDN11-204ENST00000477531 ASAP2O43150 1006 aa17.56■□□□□ 0.4
CLDN11-204ENST00000477531 PPM1AP35813 382 aa17.56■□□□□ 0.4
CLDN11-204ENST00000477531 CYP4A11Q02928 519 aa17.56■□□□□ 0.4
CLDN11-204ENST00000477531 KRT17Q04695 432 aa17.56■□□□□ 0.4
CLDN11-204ENST00000477531 CTTNQ14247 550 aaKnown RBP17.56■□□□□ 0.4
CLDN11-204ENST00000477531 KSR1Q8IVT5 923 aa17.56■□□□□ 0.4
CLDN11-204ENST00000477531 CCDC83Q8IWF9 413 aa17.56■□□□□ 0.4
CLDN11-204ENST00000477531 GJD3Q8N144 294 aa17.56■□□□□ 0.4
CLDN11-204ENST00000477531 RSPH1Q8WYR4 309 aa17.56■□□□□ 0.4
CLDN11-204ENST00000477531 C8orf76Q96K31 380 aa17.56■□□□□ 0.4
CLDN11-204ENST00000477531 ZNF558Q96NG5 402 aa17.56■□□□□ 0.4
CLDN11-204ENST00000477531 LLPHQ9BRT6 129 aaKnown RBP17.56■□□□□ 0.4
CLDN11-204ENST00000477531 MRPL9Q9BYD2 267 aaKnown RBP17.56■□□□□ 0.4
CLDN11-204ENST00000477531 DHX33Q9H6R0 707 aaKnown RBP17.56■□□□□ 0.4
CLDN11-204ENST00000477531 CWH43Q9H720 699 aa17.56■□□□□ 0.4
CLDN11-204ENST00000477531 TLE6Q9H808 572 aa17.56■□□□□ 0.4
CLDN11-204ENST00000477531 TTC12Q9H892 705 aaPredicted RBP17.56■□□□□ 0.4
CLDN11-204ENST00000477531 FNDC1Q4ZHG4 1894 aaPredicted RBP17.56■□□□□ 0.4
CLDN11-204ENST00000477531 SRGAP2CP0DJJ0 459 aa17.55■□□□□ 0.4
CLDN11-204ENST00000477531 IRS1P35568 1242 aa17.55■□□□□ 0.4
CLDN11-204ENST00000477531 TXKP42681 527 aa17.55■□□□□ 0.4
CLDN11-204ENST00000477531 NRIP1P48552 1158 aa17.55■□□□□ 0.4
CLDN11-204ENST00000477531 HMGN5P82970 282 aaKnown RBP17.55■□□□□ 0.4
CLDN11-204ENST00000477531 KCNT2Q6UVM3 1135 aa17.55■□□□□ 0.4
CLDN11-204ENST00000477531 FAM184AQ8NB25 1140 aa17.55■□□□□ 0.4
CLDN11-204ENST00000477531 PRPF31Q8WWY3 499 aaKnown RBP17.55■□□□□ 0.4
CLDN11-204ENST00000477531 TMEM143Q96AN5 459 aa17.55■□□□□ 0.4
CLDN11-204ENST00000477531 EIF2AK1Q9BQI3 630 aaKnown RBP17.55■□□□□ 0.4
CLDN11-204ENST00000477531 WRAP73Q9P2S5 460 aaPredicted RBP17.55■□□□□ 0.4
CLDN11-204ENST00000477531 PRKAG3Q9UGI9 489 aa17.55■□□□□ 0.4
CLDN11-204ENST00000477531 LZTS1Q9Y250 596 aa17.55■□□□□ 0.4
CLDN11-204ENST00000477531 CARNS1A5YM72 827 aa17.54■□□□□ 0.4
CLDN11-204ENST00000477531 SLITRK3O94933 977 aa17.54■□□□□ 0.4
CLDN11-204ENST00000477531 ATP2B1P20020 1258 aa17.54■□□□□ 0.4
CLDN11-204ENST00000477531 GTF2F1P35269 517 aaKnown RBP eCLIP17.54■□□□□ 0.4
CLDN11-204ENST00000477531 LTBRP36941 435 aa17.54■□□□□ 0.4
CLDN11-204ENST00000477531 PHKA2P46019 1235 aa17.54■□□□□ 0.4
CLDN11-204ENST00000477531 RAB27AP51159 221 aa17.54■□□□□ 0.4
CLDN11-204ENST00000477531 PLCB3Q01970 1234 aa17.54■□□□□ 0.4
CLDN11-204ENST00000477531 GUCY1B3Q02153 619 aa17.54■□□□□ 0.4
CLDN11-204ENST00000477531 SPIRE1Q08AE8 756 aa17.54■□□□□ 0.4
CLDN11-204ENST00000477531 LAMTOR4Q0VGL1 99 aa17.54■□□□□ 0.4
CLDN11-204ENST00000477531 ADAM15Q13444 863 aa17.54■□□□□ 0.4
CLDN11-204ENST00000477531 GNL2Q13823 731 aaKnown RBP17.54■□□□□ 0.4
CLDN11-204ENST00000477531 BMS1Q14692 1282 aaKnown RBP17.54■□□□□ 0.4
CLDN11-204ENST00000477531 EMC2Q15006 297 aa17.54■□□□□ 0.4
CLDN11-204ENST00000477531 CLUL1Q15846 466 aa17.54■□□□□ 0.4
CLDN11-204ENST00000477531 SRGAP1Q7Z6B7 1085 aa17.54■□□□□ 0.4
CLDN11-204ENST00000477531 RBM23Q86U06 439 aaKnown RBP17.54■□□□□ 0.4
CLDN11-204ENST00000477531 ZNF598Q86UK7 904 aaKnown RBP17.54■□□□□ 0.4
CLDN11-204ENST00000477531 EFHBQ8N7U6 833 aa17.54■□□□□ 0.4
CLDN11-204ENST00000477531 ZNF579Q8NAF0 562 aaKnown RBP17.54■□□□□ 0.4
CLDN11-204ENST00000477531 HELQQ8TDG4 1101 aa17.54■□□□□ 0.4
CLDN11-204ENST00000477531 MRPS27Q92552 414 aaKnown RBP17.54■□□□□ 0.4
CLDN11-204ENST00000477531 MTRQ99707 1265 aa17.54■□□□□ 0.4
CLDN11-204ENST00000477531 TRAIPQ9BWF2 469 aa17.54■□□□□ 0.4
CLDN11-204ENST00000477531 SH2B1Q9NRF2 756 aaPredicted RBP17.54■□□□□ 0.4
CLDN11-204ENST00000477531 BMP2KQ9NSY1 1161 aaPredicted RBP17.54■□□□□ 0.4
CLDN11-204ENST00000477531 RNF19AQ9NV58 838 aa17.54■□□□□ 0.4
CLDN11-204ENST00000477531 SPG21Q9NZD8 308 aa17.54■□□□□ 0.4
CLDN11-204ENST00000477531 HCSTQ9UBK5 93 aa17.54■□□□□ 0.4
CLDN11-204ENST00000477531 CD207Q9UJ71 328 aa17.54■□□□□ 0.4
CLDN11-204ENST00000477531 KIAA1671Q9BY89 1806 aa17.54■□□□□ 0.4
CLDN11-204ENST00000477531 MCM7P33993 719 aa17.53■□□□□ 0.4
CLDN11-204ENST00000477531 ALDH7A1P49419 539 aaKnown RBP17.53■□□□□ 0.4
CLDN11-204ENST00000477531 NCBP1Q09161 790 aaKnown RBP17.53■□□□□ 0.4
CLDN11-204ENST00000477531 SMAD4Q13485 552 aaKnown RBP17.53■□□□□ 0.4
CLDN11-204ENST00000477531 MXD4Q14582 209 aaPredicted RBP17.53■□□□□ 0.4
CLDN11-204ENST00000477531 CLLU1OSQ5K130 101 aa17.53■□□□□ 0.4
CLDN11-204ENST00000477531 GLB1LQ6UWU2 654 aa17.53■□□□□ 0.4
CLDN11-204ENST00000477531 LRRC55Q6ZSA7 311 aa17.53■□□□□ 0.4
CLDN11-204ENST00000477531 ADGRD2Q7Z7M1 963 aa17.53■□□□□ 0.4
CLDN11-204ENST00000477531 PGBD4Q96DM1 585 aa17.53■□□□□ 0.4
CLDN11-204ENST00000477531 CDCA3Q99618 268 aaPredicted RBP17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 153.9 ms