RNA–Protein interactions for RNA: ENST00000476664.1

LRCH3-215, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 227 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-215ENST00000476664 FANCD2OSQ96PS1 177 aa8□□□□□ -1.13
LRCH3-215ENST00000476664 SEC62Q99442 399 aaKnown RBP8□□□□□ -1.13
LRCH3-215ENST00000476664 CARD10Q9BWT7 1032 aa8□□□□□ -1.13
LRCH3-215ENST00000476664 PRDM14Q9GZV8 571 aa8□□□□□ -1.13
LRCH3-215ENST00000476664 OSBPL5Q9H0X9 879 aaPredicted RBP8□□□□□ -1.13
LRCH3-215ENST00000476664 PCIF1Q9H4Z3 704 aa8□□□□□ -1.13
LRCH3-215ENST00000476664 RIC8AQ9NPQ8 531 aa8□□□□□ -1.13
LRCH3-215ENST00000476664 MBIPQ9NS73 344 aa8□□□□□ -1.13
LRCH3-215ENST00000476664 CATSPERZQ9NTU4 200 aa8□□□□□ -1.13
LRCH3-215ENST00000476664 GFOD1Q9NXC2 390 aa8□□□□□ -1.13
LRCH3-215ENST00000476664 TTLL3Q9Y4R7 772 aa8□□□□□ -1.13
LRCH3-215ENST00000476664 BACE2Q9Y5Z0 518 aa8□□□□□ -1.13
LRCH3-215ENST00000476664 USP6P35125 1406 aa8□□□□□ -1.13
LRCH3-215ENST00000476664 RPGRIP1LQ68CZ1 1315 aa8□□□□□ -1.13
LRCH3-215ENST00000476664 N4BP2Q86UW6 1770 aaPredicted RBP7.99□□□□□ -1.13
LRCH3-215ENST00000476664 SLC12A8A0AV02 714 aa7.99□□□□□ -1.13
LRCH3-215ENST00000476664 SLC35F4A4IF30 521 aa7.99□□□□□ -1.13
LRCH3-215ENST00000476664 A6NCN8 305 aa7.99□□□□□ -1.13
LRCH3-215ENST00000476664 MSCO60682 206 aa7.99□□□□□ -1.13
LRCH3-215ENST00000476664 NDUFS2O75306 463 aa7.99□□□□□ -1.13
LRCH3-215ENST00000476664 LRIG2O94898 1065 aa7.99□□□□□ -1.13
LRCH3-215ENST00000476664 PYGLP06737 847 aa7.99□□□□□ -1.13
LRCH3-215ENST00000476664 RPL17P18621 184 aaKnown RBP7.99□□□□□ -1.13
LRCH3-215ENST00000476664 SMARCA1P28370 1054 aa7.99□□□□□ -1.13
LRCH3-215ENST00000476664 PIK3CBP42338 1070 aa7.99□□□□□ -1.13
LRCH3-215ENST00000476664 TECP42680 631 aa7.99□□□□□ -1.13
LRCH3-215ENST00000476664 FXR1P51114 621 aaKnown RBP eCLIP7.99□□□□□ -1.13
LRCH3-215ENST00000476664 SOX10P56693 466 aa7.99□□□□□ -1.13
LRCH3-215ENST00000476664 LACTBP83111 547 aaPredicted RBP7.99□□□□□ -1.13
LRCH3-215ENST00000476664 PRR20EP86478 221 aa7.99□□□□□ -1.13
LRCH3-215ENST00000476664 PRR20CP86479 221 aa7.99□□□□□ -1.13
LRCH3-215ENST00000476664 PRR20DP86480 221 aa7.99□□□□□ -1.13
LRCH3-215ENST00000476664 PRR20BP86481 221 aa7.99□□□□□ -1.13
LRCH3-215ENST00000476664 PRR20AP86496 221 aa7.99□□□□□ -1.13
LRCH3-215ENST00000476664 POLD3Q15054 466 aaPredicted RBP7.99□□□□□ -1.13
LRCH3-215ENST00000476664 CNN3Q15417 329 aaKnown RBP7.99□□□□□ -1.13
LRCH3-215ENST00000476664 VPS53Q5VIR6 699 aa7.99□□□□□ -1.13
LRCH3-215ENST00000476664 CWF19L1Q69YN2 538 aaKnown RBP7.99□□□□□ -1.13
LRCH3-215ENST00000476664 FOXR1Q6PIV2 292 aa7.99□□□□□ -1.13
LRCH3-215ENST00000476664 ZZZ3Q8IYH5 903 aa7.99□□□□□ -1.13
LRCH3-215ENST00000476664 KIAA1958Q8N8K9 716 aa7.99□□□□□ -1.13
LRCH3-215ENST00000476664 DNAJB8Q8NHS0 232 aa7.99□□□□□ -1.13
LRCH3-215ENST00000476664 HDAC2Q92769 488 aaKnown RBP7.99□□□□□ -1.13
LRCH3-215ENST00000476664 GTPBP3Q969Y2 492 aaKnown RBP7.99□□□□□ -1.13
LRCH3-215ENST00000476664 KIAA1191Q96A73 305 aa7.99□□□□□ -1.13
LRCH3-215ENST00000476664 TBC1D20Q96BZ9 403 aa7.99□□□□□ -1.13
LRCH3-215ENST00000476664 ZNF837Q96EG3 531 aaPredicted RBP7.99□□□□□ -1.13
LRCH3-215ENST00000476664 UBXN10Q96LJ8 280 aa7.99□□□□□ -1.13
LRCH3-215ENST00000476664 BTBD1Q9H0C5 482 aa7.99□□□□□ -1.13
LRCH3-215ENST00000476664 STARD7Q9NQZ5 370 aa7.99□□□□□ -1.13
LRCH3-215ENST00000476664 KCNG1Q9UIX4 513 aa7.99□□□□□ -1.13
LRCH3-215ENST00000476664 PPP1R9AQ9ULJ8 1098 aa7.99□□□□□ -1.13
LRCH3-215ENST00000476664 COL18A1P39060 1754 aa7.99□□□□□ -1.13
LRCH3-215ENST00000476664 KIF1BO60333 1816 aa7.99□□□□□ -1.13
LRCH3-215ENST00000476664 SBF1O95248 1867 aa7.98□□□□□ -1.13
LRCH3-215ENST00000476664 KIAA1551Q9HCM1 1747 aa7.98□□□□□ -1.13
LRCH3-215ENST00000476664 ANKRD50Q9ULJ7 1429 aa7.98□□□□□ -1.13
LRCH3-215ENST00000476664 STXBP3O00186 592 aa7.98□□□□□ -1.13
LRCH3-215ENST00000476664 FOXN3O00409 490 aaPredicted RBP7.98□□□□□ -1.13
LRCH3-215ENST00000476664 BAIAP3O94812 1187 aa7.98□□□□□ -1.13
LRCH3-215ENST00000476664 RPN1P04843 607 aaKnown RBP7.98□□□□□ -1.13
LRCH3-215ENST00000476664 IFIT1P09914 478 aaKnown RBP7.98□□□□□ -1.13
LRCH3-215ENST00000476664 BMP4P12644 408 aa7.98□□□□□ -1.13
LRCH3-215ENST00000476664 VEGFAP15692 232 aaPredicted RBP7.98□□□□□ -1.13
LRCH3-215ENST00000476664 SLC9A1P19634 815 aa7.98□□□□□ -1.13
LRCH3-215ENST00000476664 CAPN3P20807 821 aa7.98□□□□□ -1.13
LRCH3-215ENST00000476664 CD40P25942 277 aa7.98□□□□□ -1.13
LRCH3-215ENST00000476664 IL12RB1P42701 662 aa7.98□□□□□ -1.13
LRCH3-215ENST00000476664 MTNR1BP49286 362 aa7.98□□□□□ -1.13
LRCH3-215ENST00000476664 CASP5P51878 434 aa7.98□□□□□ -1.13
LRCH3-215ENST00000476664 SLC16A1P53985 500 aa7.98□□□□□ -1.13
LRCH3-215ENST00000476664 MPP1Q00013 466 aa7.98□□□□□ -1.13
LRCH3-215ENST00000476664 PDCD1Q15116 288 aa7.98□□□□□ -1.13
LRCH3-215ENST00000476664 ANO4Q32M45 955 aa7.98□□□□□ -1.13
LRCH3-215ENST00000476664 EXOSC6Q5RKV6 272 aaKnown RBP7.98□□□□□ -1.13
LRCH3-215ENST00000476664 NUTM2GQ5VZR2 741 aa7.98□□□□□ -1.13
LRCH3-215ENST00000476664 C16orf54Q6UWD8 224 aa7.98□□□□□ -1.13
LRCH3-215ENST00000476664 OR8H2Q8N162 312 aa7.98□□□□□ -1.13
LRCH3-215ENST00000476664 PRR18Q8N4B5 295 aa7.98□□□□□ -1.13
LRCH3-215ENST00000476664 RPGRQ92834 1020 aaKnown RBP7.98□□□□□ -1.13
LRCH3-215ENST00000476664 PHKBQ93100 1093 aa7.98□□□□□ -1.13
LRCH3-215ENST00000476664 ZBTB10Q96DT7 871 aa7.98□□□□□ -1.13
LRCH3-215ENST00000476664 ZFP42Q96MM3 310 aa7.98□□□□□ -1.13
LRCH3-215ENST00000476664 ELF4Q99607 663 aaPredicted RBP7.98□□□□□ -1.13
LRCH3-215ENST00000476664 SLC26A6Q9BXS9 759 aa7.98□□□□□ -1.13
LRCH3-215ENST00000476664 IPPKQ9H8X2 491 aa7.98□□□□□ -1.13
LRCH3-215ENST00000476664 SSU72Q9NP77 194 aaKnown RBP7.98□□□□□ -1.13
LRCH3-215ENST00000476664 GPRC5CQ9NQ84 441 aa7.98□□□□□ -1.13
LRCH3-215ENST00000476664 TBC1D22BQ9NU19 505 aa7.98□□□□□ -1.13
LRCH3-215ENST00000476664 CASP8AP2Q9UKL3 1982 aa7.98□□□□□ -1.13
LRCH3-215ENST00000476664 QRICH2Q9H0J4 1663 aa7.98□□□□□ -1.13
LRCH3-215ENST00000476664 C2orf71A6NGG8 1288 aa7.97□□□□□ -1.13
LRCH3-215ENST00000476664 RRN3P2A6NIE6 340 aa7.97□□□□□ -1.13
LRCH3-215ENST00000476664 GPR25O00155 361 aa7.97□□□□□ -1.13
LRCH3-215ENST00000476664 ADAMTS3O15072 1205 aa7.97□□□□□ -1.13
LRCH3-215ENST00000476664 CSTBP04080 98 aaKnown RBP7.97□□□□□ -1.13
LRCH3-215ENST00000476664 BMP1P13497 986 aa7.97□□□□□ -1.13
LRCH3-215ENST00000476664 MTHFD2P13995 350 aa7.97□□□□□ -1.13
LRCH3-215ENST00000476664 ENPP1P22413 925 aa7.97□□□□□ -1.13
LRCH3-215ENST00000476664 HTR1BP28222 390 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms