RNA–Protein interactions for RNA: ENST00000476625.5

HDAC6-219, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-219ENST00000476625 PPM1AP35813 382 aa13.53□□□□□ -0.24
HDAC6-219ENST00000476625 MTERF2Q49AM1 385 aa13.53□□□□□ -0.24
HDAC6-219ENST00000476625 TPRNQ4KMQ1 711 aa13.53□□□□□ -0.24
HDAC6-219ENST00000476625 ODR4Q5SWX8 454 aa13.53□□□□□ -0.24
HDAC6-219ENST00000476625 CES5AQ6NT32 575 aa13.53□□□□□ -0.24
HDAC6-219ENST00000476625 ZNF280BQ86YH2 543 aa13.53□□□□□ -0.24
HDAC6-219ENST00000476625 TDRD5Q8NAT2 981 aaKnown RBP13.53□□□□□ -0.24
HDAC6-219ENST00000476625 FLCNQ8NFG4 579 aa13.53□□□□□ -0.24
HDAC6-219ENST00000476625 NLRP7Q8WX94 980 aa13.53□□□□□ -0.24
HDAC6-219ENST00000476625 A0A087WZ62 844 aa13.52□□□□□ -0.25
HDAC6-219ENST00000476625 A0A0U1RQF3 1178 aa13.52□□□□□ -0.25
HDAC6-219ENST00000476625 HOXA2O43364 376 aa13.52□□□□□ -0.25
HDAC6-219ENST00000476625 STBD1O95210 358 aa13.52□□□□□ -0.25
HDAC6-219ENST00000476625 NPR3P17342 541 aa13.52□□□□□ -0.25
HDAC6-219ENST00000476625 SLC11A1P49279 550 aa13.52□□□□□ -0.25
HDAC6-219ENST00000476625 ASTLQ6HA08 431 aaPredicted RBP13.52□□□□□ -0.25
HDAC6-219ENST00000476625 KIAA1841Q6NSI8 718 aa13.52□□□□□ -0.25
HDAC6-219ENST00000476625 DHX32Q7L7V1 743 aaKnown RBP13.52□□□□□ -0.25
HDAC6-219ENST00000476625 SMAP1Q8IYB5 467 aaPredicted RBP13.52□□□□□ -0.25
HDAC6-219ENST00000476625 REXO1Q8N1G1 1221 aaKnown RBP13.52□□□□□ -0.25
HDAC6-219ENST00000476625 RSAD2Q8WXG1 361 aa13.52□□□□□ -0.25
HDAC6-219ENST00000476625 CEP89Q96ST8 783 aa13.52□□□□□ -0.25
HDAC6-219ENST00000476625 FDXACB1Q9BRP7 624 aaPredicted RBP13.52□□□□□ -0.25
HDAC6-219ENST00000476625 ZMYND12Q9H0C1 365 aa13.52□□□□□ -0.25
HDAC6-219ENST00000476625 DISC1Q9NRI5 854 aa13.52□□□□□ -0.25
HDAC6-219ENST00000476625 TBC1D22BQ9NU19 505 aa13.52□□□□□ -0.25
HDAC6-219ENST00000476625 TBC1D13Q9NVG8 400 aa13.52□□□□□ -0.25
HDAC6-219ENST00000476625 VPS54Q9P1Q0 977 aa13.52□□□□□ -0.25
HDAC6-219ENST00000476625 SEPT9Q9UHD8 586 aaPredicted RBP13.52□□□□□ -0.25
HDAC6-219ENST00000476625 TCEAL9Q9UHQ7 104 aa13.52□□□□□ -0.25
HDAC6-219ENST00000476625 FSD2A1L4K1 749 aa13.51□□□□□ -0.25
HDAC6-219ENST00000476625 WDR64B1ANS9 1081 aa13.51□□□□□ -0.25
HDAC6-219ENST00000476625 PROB1E7EW31 1015 aa13.51□□□□□ -0.25
HDAC6-219ENST00000476625 MAGEB2O15479 319 aa13.51□□□□□ -0.25
HDAC6-219ENST00000476625 N4BP1O75113 896 aaKnown RBP13.51□□□□□ -0.25
HDAC6-219ENST00000476625 EOMESO95936 686 aa13.51□□□□□ -0.25
HDAC6-219ENST00000476625 NBL1P41271 181 aa13.51□□□□□ -0.25
HDAC6-219ENST00000476625 MTHFRP42898 656 aa13.51□□□□□ -0.25
HDAC6-219ENST00000476625 PHKA2P46019 1235 aa13.51□□□□□ -0.25
HDAC6-219ENST00000476625 SETQ01105 290 aaPredicted RBP13.51□□□□□ -0.25
HDAC6-219ENST00000476625 ITIH3Q06033 890 aa13.51□□□□□ -0.25
HDAC6-219ENST00000476625 PLA2G4FQ68DD2 849 aa13.51□□□□□ -0.25
HDAC6-219ENST00000476625 Q6ZUG5 572 aa13.51□□□□□ -0.25
HDAC6-219ENST00000476625 UBALD2Q8IYN6 164 aa13.51□□□□□ -0.25
HDAC6-219ENST00000476625 ZNF579Q8NAF0 562 aaKnown RBP13.51□□□□□ -0.25
HDAC6-219ENST00000476625 TMEM169Q96HH4 297 aa13.51□□□□□ -0.25
HDAC6-219ENST00000476625 IGSF21Q96ID5 467 aa13.51□□□□□ -0.25
HDAC6-219ENST00000476625 MFSD1Q9H3U5 465 aa13.51□□□□□ -0.25
HDAC6-219ENST00000476625 BMP2KQ9NSY1 1161 aaPredicted RBP13.51□□□□□ -0.25
HDAC6-219ENST00000476625 CEP131Q9UPN4 1083 aa13.51□□□□□ -0.25
HDAC6-219ENST00000476625 TDRD15B5MCY1 1934 aaKnown RBP13.51□□□□□ -0.25
HDAC6-219ENST00000476625 F8W810 466 aa13.5□□□□□ -0.25
HDAC6-219ENST00000476625 hCG_1984214I3L0E3 225 aa13.5□□□□□ -0.25
HDAC6-219ENST00000476625 DDHD2O94830 711 aa13.5□□□□□ -0.25
HDAC6-219ENST00000476625 TDP2O95551 362 aa13.5□□□□□ -0.25
HDAC6-219ENST00000476625 GALTP07902 379 aa13.5□□□□□ -0.25
HDAC6-219ENST00000476625 CTSAP10619 480 aa13.5□□□□□ -0.25
HDAC6-219ENST00000476625 ALDH7A1P49419 539 aaKnown RBP13.5□□□□□ -0.25
HDAC6-219ENST00000476625 TBC1D8BQ0IIM8 1120 aa13.5□□□□□ -0.25
HDAC6-219ENST00000476625 TARBP2Q15633 366 aaKnown RBP13.5□□□□□ -0.25
HDAC6-219ENST00000476625 PTPN14Q15678 1187 aa13.5□□□□□ -0.25
HDAC6-219ENST00000476625 TWF2Q6IBS0 349 aaKnown RBP13.5□□□□□ -0.25
HDAC6-219ENST00000476625 ZDHHC14Q8IZN3 488 aa13.5□□□□□ -0.25
HDAC6-219ENST00000476625 ZNF713Q8N859 430 aaPredicted RBP13.5□□□□□ -0.25
HDAC6-219ENST00000476625 BRF1Q92994 677 aa13.5□□□□□ -0.25
HDAC6-219ENST00000476625 CCDC136Q96JN2 1154 aa13.5□□□□□ -0.25
HDAC6-219ENST00000476625 FAM167AQ96KS9 214 aa13.5□□□□□ -0.25
HDAC6-219ENST00000476625 NECTIN4Q96NY8 510 aa13.5□□□□□ -0.25
HDAC6-219ENST00000476625 NCOA5Q9HCD5 579 aaKnown RBP13.5□□□□□ -0.25
HDAC6-219ENST00000476625 C6orf50Q9HD87 102 aa13.5□□□□□ -0.25
HDAC6-219ENST00000476625 RNF216Q9NWF9 866 aaPredicted RBP13.5□□□□□ -0.25
HDAC6-219ENST00000476625 PIN4Q9Y237 131 aaKnown RBP13.5□□□□□ -0.25
HDAC6-219ENST00000476625 ZFHX2Q9C0A1 2572 aaPredicted RBP13.5□□□□□ -0.25
HDAC6-219ENST00000476625 ESYT2A0FGR8 921 aa13.49□□□□□ -0.25
HDAC6-219ENST00000476625 C2CD2LO14523 706 aa13.49□□□□□ -0.25
HDAC6-219ENST00000476625 OFD1O75665 1012 aa13.49□□□□□ -0.25
HDAC6-219ENST00000476625 TMOD1P28289 359 aa13.49□□□□□ -0.25
HDAC6-219ENST00000476625 CIITAP33076 1130 aa13.49□□□□□ -0.25
HDAC6-219ENST00000476625 LRCH2Q5VUJ6 765 aa13.49□□□□□ -0.25
HDAC6-219ENST00000476625 TAS1R1Q7RTX1 841 aa13.49□□□□□ -0.25
HDAC6-219ENST00000476625 DDX53Q86TM3 631 aaKnown RBP13.49□□□□□ -0.25
HDAC6-219ENST00000476625 CABP7Q86V35 215 aa13.49□□□□□ -0.25
HDAC6-219ENST00000476625 RHPN2Q8IUC4 686 aa13.49□□□□□ -0.25
HDAC6-219ENST00000476625 ADSSL1Q8N142 457 aa13.49□□□□□ -0.25
HDAC6-219ENST00000476625 SLC5A5Q92911 643 aa13.49□□□□□ -0.25
HDAC6-219ENST00000476625 NLRP4Q96MN2 994 aa13.49□□□□□ -0.25
HDAC6-219ENST00000476625 KLHL5Q96PQ7 755 aa13.49□□□□□ -0.25
HDAC6-219ENST00000476625 FAM105AQ9NUU6 356 aa13.49□□□□□ -0.25
HDAC6-219ENST00000476625 GAS7O60861 476 aa13.48□□□□□ -0.25
HDAC6-219ENST00000476625 POMCP01189 267 aa13.48□□□□□ -0.25
HDAC6-219ENST00000476625 CFHP08603 1231 aa13.48□□□□□ -0.25
HDAC6-219ENST00000476625 CNPP09543 421 aaKnown RBP13.48□□□□□ -0.25
HDAC6-219ENST00000476625 CCT2P78371 535 aaKnown RBP13.48□□□□□ -0.25
HDAC6-219ENST00000476625 NTRK3Q16288 839 aa13.48□□□□□ -0.25
HDAC6-219ENST00000476625 NOMO2Q5JPE7 1267 aa13.48□□□□□ -0.25
HDAC6-219ENST00000476625 ATAT1Q5SQI0 421 aa13.48□□□□□ -0.25
HDAC6-219ENST00000476625 POTEGQ6S5H5 508 aa13.48□□□□□ -0.25
HDAC6-219ENST00000476625 AGMOQ6ZNB7 445 aa13.48□□□□□ -0.25
HDAC6-219ENST00000476625 MIER3Q7Z3K6 550 aa13.48□□□□□ -0.25
HDAC6-219ENST00000476625 SIX5Q8N196 739 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms