RNA–Protein interactions for RNA: ENST00000476162.5

VARS2-207, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best)

Gene VARS2, Length 2,228 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-207ENST00000476162 SLC9A9Q8IVB4 645 aa17.4■□□□□ 0.38
VARS2-207ENST00000476162 ZKSCAN4Q969J2 545 aaPredicted RBP17.4■□□□□ 0.38
VARS2-207ENST00000476162 LRRC1Q9BTT6 524 aa17.4■□□□□ 0.38
VARS2-207ENST00000476162 PXMP2Q9NR77 195 aa17.4■□□□□ 0.38
VARS2-207ENST00000476162 BCS1LQ9Y276 419 aa17.4■□□□□ 0.38
VARS2-207ENST00000476162 RIPK3Q9Y572 518 aa17.4■□□□□ 0.38
VARS2-207ENST00000476162 GRID2IPA4D2P6 1211 aa17.4■□□□□ 0.38
VARS2-207ENST00000476162 GFPT2O94808 682 aa17.4■□□□□ 0.38
VARS2-207ENST00000476162 PPP2R5AQ15172 486 aa17.4■□□□□ 0.38
VARS2-207ENST00000476162 ARHGEF16Q5VV41 709 aa17.4■□□□□ 0.38
VARS2-207ENST00000476162 PRAMEF18Q5VWM3 479 aa17.4■□□□□ 0.38
VARS2-207ENST00000476162 MMS22LQ6ZRQ5 1243 aa17.4■□□□□ 0.38
VARS2-207ENST00000476162 DHX37Q8IY37 1157 aaKnown RBP17.4■□□□□ 0.38
VARS2-207ENST00000476162 MSL3Q8N5Y2 521 aaKnown RBP17.4■□□□□ 0.38
VARS2-207ENST00000476162 SAMD3Q8N6K7 520 aa17.4■□□□□ 0.38
VARS2-207ENST00000476162 HDAC7Q8WUI4 952 aa17.4■□□□□ 0.38
VARS2-207ENST00000476162 PACSIN2Q9UNF0 486 aaPredicted RBP17.4■□□□□ 0.38
VARS2-207ENST00000476162 FZD1Q9UP38 647 aa17.4■□□□□ 0.38
VARS2-207ENST00000476162 MYH11P35749 1972 aa17.39■□□□□ 0.38
VARS2-207ENST00000476162 TISP43B9A030 160 aa17.39■□□□□ 0.37
VARS2-207ENST00000476162 EIF3JO75822 258 aaKnown RBP17.39■□□□□ 0.37
VARS2-207ENST00000476162 LYPLA2O95372 231 aa17.39■□□□□ 0.37
VARS2-207ENST00000476162 MYBL2P10244 700 aa17.39■□□□□ 0.37
VARS2-207ENST00000476162 STAT1P42224 750 aa17.39■□□□□ 0.37
VARS2-207ENST00000476162 BACE1P56817 501 aa17.39■□□□□ 0.37
VARS2-207ENST00000476162 MRPS25P82663 173 aaKnown RBP17.39■□□□□ 0.37
VARS2-207ENST00000476162 BFSP1Q12934 665 aa17.39■□□□□ 0.37
VARS2-207ENST00000476162 MAP9Q49MG5 647 aa17.39■□□□□ 0.37
VARS2-207ENST00000476162 MEI1Q5TIA1 1274 aa17.39■□□□□ 0.37
VARS2-207ENST00000476162 CCDC70Q6NSX1 233 aa17.39■□□□□ 0.37
VARS2-207ENST00000476162 CCNI2Q6ZMN8 369 aaPredicted RBP17.39■□□□□ 0.37
VARS2-207ENST00000476162 PCIF1Q9H4Z3 704 aa17.39■□□□□ 0.37
VARS2-207ENST00000476162 TESPA1A2RU30 521 aaPredicted RBP17.39■□□□□ 0.37
VARS2-207ENST00000476162 BTNL10A8MVZ5 291 aa17.39■□□□□ 0.37
VARS2-207ENST00000476162 PLS3P13797 630 aa17.39■□□□□ 0.37
VARS2-207ENST00000476162 BAATQ14032 418 aaPredicted RBP17.39■□□□□ 0.37
VARS2-207ENST00000476162 GSPT2Q8IYD1 628 aaKnown RBP17.39■□□□□ 0.37
VARS2-207ENST00000476162 DNAJC12Q9UKB3 198 aa17.39■□□□□ 0.37
VARS2-207ENST00000476162 F8VZ95 297 aa17.38■□□□□ 0.37
VARS2-207ENST00000476162 DDX3XO00571 662 aaKnown RBP eCLIP17.38■□□□□ 0.37
VARS2-207ENST00000476162 BACH1O14867 736 aa17.38■□□□□ 0.37
VARS2-207ENST00000476162 EVI5O60447 810 aa17.38■□□□□ 0.37
VARS2-207ENST00000476162 N4BP1O75113 896 aaKnown RBP17.38■□□□□ 0.37
VARS2-207ENST00000476162 CCNE2O96020 404 aa17.38■□□□□ 0.37
VARS2-207ENST00000476162 MAPTP10636 758 aaKnown RBP17.38■□□□□ 0.37
VARS2-207ENST00000476162 FERP16591 822 aa17.38■□□□□ 0.37
VARS2-207ENST00000476162 DRAP1Q14919 205 aaPredicted RBP17.38■□□□□ 0.37
VARS2-207ENST00000476162 CFAP221Q4G0U5 840 aa17.38■□□□□ 0.37
VARS2-207ENST00000476162 SCYL3Q8IZE3 742 aa17.38■□□□□ 0.37
VARS2-207ENST00000476162 CCDC43Q96MW1 224 aaKnown RBP17.38■□□□□ 0.37
VARS2-207ENST00000476162 GDAP1L1Q96MZ0 367 aa17.38■□□□□ 0.37
VARS2-207ENST00000476162 STK33Q9BYT3 514 aa17.38■□□□□ 0.37
VARS2-207ENST00000476162 INTS2Q9H0H0 1204 aaKnown RBP17.38■□□□□ 0.37
VARS2-207ENST00000476162 TMEM206Q9H813 350 aa17.38■□□□□ 0.37
VARS2-207ENST00000476162 GPRC5CQ9NQ84 441 aa17.38■□□□□ 0.37
VARS2-207ENST00000476162 RNF146Q9NTX7 359 aa17.38■□□□□ 0.37
VARS2-207ENST00000476162 VPS18Q9P253 973 aa17.38■□□□□ 0.37
VARS2-207ENST00000476162 DMGDHQ9UI17 866 aaKnown RBP17.38■□□□□ 0.37
VARS2-207ENST00000476162 NENFQ9UMX5 172 aa17.38■□□□□ 0.37
VARS2-207ENST00000476162 ANXA13P27216 316 aa17.37■□□□□ 0.37
VARS2-207ENST00000476162 SOX5P35711 763 aa17.37■□□□□ 0.37
VARS2-207ENST00000476162 MYL7Q01449 175 aa17.37■□□□□ 0.37
VARS2-207ENST00000476162 MYBPC2Q14324 1141 aa17.37■□□□□ 0.37
VARS2-207ENST00000476162 DCAF15Q66K64 600 aa17.37■□□□□ 0.37
VARS2-207ENST00000476162 VPS36Q86VN1 386 aa17.37■□□□□ 0.37
VARS2-207ENST00000476162 C4orf19Q8IY42 314 aa17.37■□□□□ 0.37
VARS2-207ENST00000476162 ZNF280CQ8ND82 737 aa17.37■□□□□ 0.37
VARS2-207ENST00000476162 WRNIP1Q96S55 665 aa17.37■□□□□ 0.37
VARS2-207ENST00000476162 RBM12Q9NTZ6 932 aaKnown RBP17.37■□□□□ 0.37
VARS2-207ENST00000476162 PNMA2Q9UL42 364 aa17.37■□□□□ 0.37
VARS2-207ENST00000476162 LOXHD1Q8IVV2 1947 aa17.37■□□□□ 0.37
VARS2-207ENST00000476162 FDX1P10109 184 aa17.37■□□□□ 0.37
VARS2-207ENST00000476162 PTPRAP18433 802 aa17.37■□□□□ 0.37
VARS2-207ENST00000476162 NPEPPSP55786 919 aa17.37■□□□□ 0.37
VARS2-207ENST00000476162 PSMC5P62195 406 aa17.37■□□□□ 0.37
VARS2-207ENST00000476162 DLG4P78352 724 aa17.37■□□□□ 0.37
VARS2-207ENST00000476162 SLC7A5Q01650 507 aa17.37■□□□□ 0.37
VARS2-207ENST00000476162 ALCAMQ13740 583 aa17.37■□□□□ 0.37
VARS2-207ENST00000476162 EFCAB13Q8IY85 973 aa17.37■□□□□ 0.37
VARS2-207ENST00000476162 ACCSQ96QU6 501 aa17.37■□□□□ 0.37
VARS2-207ENST00000476162 CBWD1Q9BRT8 395 aa17.37■□□□□ 0.37
VARS2-207ENST00000476162 BCCIPQ9P287 314 aaKnown RBP eCLIP17.37■□□□□ 0.37
VARS2-207ENST00000476162 RNF14Q9UBS8 474 aa17.37■□□□□ 0.37
VARS2-207ENST00000476162 TCEAL9Q9UHQ7 104 aa17.37■□□□□ 0.37
VARS2-207ENST00000476162 WDR64B1ANS9 1081 aa17.36■□□□□ 0.37
VARS2-207ENST00000476162 FZD9O00144 591 aa17.36■□□□□ 0.37
VARS2-207ENST00000476162 KIF1CO43896 1103 aaKnown RBP17.36■□□□□ 0.37
VARS2-207ENST00000476162 JAK3P52333 1124 aa17.36■□□□□ 0.37
VARS2-207ENST00000476162 PEX3P56589 373 aa17.36■□□□□ 0.37
VARS2-207ENST00000476162 PLA2G4FQ68DD2 849 aa17.36■□□□□ 0.37
VARS2-207ENST00000476162 HAUS6Q7Z4H7 955 aa17.36■□□□□ 0.37
VARS2-207ENST00000476162 GPR88Q9GZN0 384 aa17.36■□□□□ 0.37
VARS2-207ENST00000476162 GOLPH3Q9H4A6 298 aa17.36■□□□□ 0.37
VARS2-207ENST00000476162 PICK1Q9NRD5 415 aa17.36■□□□□ 0.37
VARS2-207ENST00000476162 APEX2Q9UBZ4 518 aa17.36■□□□□ 0.37
VARS2-207ENST00000476162 ZNF112Q9UJU3 913 aa17.36■□□□□ 0.37
VARS2-207ENST00000476162 KRT13P13646 458 aa17.36■□□□□ 0.37
VARS2-207ENST00000476162 HMGCS2P54868 508 aa17.36■□□□□ 0.37
VARS2-207ENST00000476162 XKR9Q5GH70 373 aa17.36■□□□□ 0.37
VARS2-207ENST00000476162 U2AF1L4Q8WU68 220 aaKnown RBP17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms