RNA–Protein interactions for RNA: ENST00000476139.5

TVP23B-202, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 1 (best) BASIC

Gene TVP23B, Length 2,989 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-202ENST00000476139 RNF40O75150 1001 aa18.12■□□□□ 0.49
TVP23B-202ENST00000476139 PHLDB3Q6NSJ2 640 aa18.12■□□□□ 0.49
TVP23B-202ENST00000476139 ZNF572Q7Z3I7 529 aaPredicted RBP18.12■□□□□ 0.49
TVP23B-202ENST00000476139 GPR88Q9GZN0 384 aa18.12■□□□□ 0.49
TVP23B-202ENST00000476139 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.12■□□□□ 0.49
TVP23B-202ENST00000476139 DBR1Q9UK59 544 aaKnown RBP18.12■□□□□ 0.49
TVP23B-202ENST00000476139 TMCO5BA8MYB1 307 aa18.12■□□□□ 0.49
TVP23B-202ENST00000476139 F8VZ95 297 aa18.12■□□□□ 0.49
TVP23B-202ENST00000476139 PLS3P13797 630 aa18.12■□□□□ 0.49
TVP23B-202ENST00000476139 GGCXP38435 758 aa18.12■□□□□ 0.49
TVP23B-202ENST00000476139 PAFAH1B1P43034 410 aa18.12■□□□□ 0.49
TVP23B-202ENST00000476139 SOX10P56693 466 aa18.12■□□□□ 0.49
TVP23B-202ENST00000476139 ARHGAP44Q17R89 818 aa18.12■□□□□ 0.49
TVP23B-202ENST00000476139 SCYL3Q8IZE3 742 aa18.12■□□□□ 0.49
TVP23B-202ENST00000476139 ZNF280CQ8ND82 737 aa18.12■□□□□ 0.49
TVP23B-202ENST00000476139 KIFC3Q9BVG8 833 aa18.12■□□□□ 0.49
TVP23B-202ENST00000476139 UBE4BO95155 1302 aa18.11■□□□□ 0.49
TVP23B-202ENST00000476139 FZD9O00144 591 aa18.11■□□□□ 0.49
TVP23B-202ENST00000476139 PRKG1Q13976 671 aa18.11■□□□□ 0.49
TVP23B-202ENST00000476139 SNRNP48Q6IEG0 339 aaKnown RBP18.11■□□□□ 0.49
TVP23B-202ENST00000476139 HAUS6Q7Z4H7 955 aa18.11■□□□□ 0.49
TVP23B-202ENST00000476139 GLYCTKQ8IVS8 523 aa18.11■□□□□ 0.49
TVP23B-202ENST00000476139 ZNF541Q9H0D2 1346 aa18.11■□□□□ 0.49
TVP23B-202ENST00000476139 STAT1P42224 750 aa18.11■□□□□ 0.49
TVP23B-202ENST00000476139 XKR9Q5GH70 373 aa18.11■□□□□ 0.49
TVP23B-202ENST00000476139 TAF3Q5VWG9 929 aa18.11■□□□□ 0.49
TVP23B-202ENST00000476139 U2AF1L4Q8WU68 220 aaKnown RBP18.11■□□□□ 0.49
TVP23B-202ENST00000476139 CCDC43Q96MW1 224 aaKnown RBP18.11■□□□□ 0.49
TVP23B-202ENST00000476139 INTS2Q9H0H0 1204 aaKnown RBP18.11■□□□□ 0.49
TVP23B-202ENST00000476139 MAP3K20Q9NYL2 800 aaKnown RBP18.11■□□□□ 0.49
TVP23B-202ENST00000476139 NR3C2P08235 984 aa18.1■□□□□ 0.49
TVP23B-202ENST00000476139 SOX5P35711 763 aa18.1■□□□□ 0.49
TVP23B-202ENST00000476139 SP4Q02446 784 aa18.1■□□□□ 0.49
TVP23B-202ENST00000476139 PPP3CAQ08209 521 aa18.1■□□□□ 0.49
TVP23B-202ENST00000476139 FAM102BQ5T8I3 360 aa18.1■□□□□ 0.49
TVP23B-202ENST00000476139 ANO5Q75V66 913 aa18.1■□□□□ 0.49
TVP23B-202ENST00000476139 SND1Q7KZF4 910 aaKnown RBP eCLIP18.1■□□□□ 0.49
TVP23B-202ENST00000476139 SLC9A9Q8IVB4 645 aa18.1■□□□□ 0.49
TVP23B-202ENST00000476139 OLIG1Q8TAK6 271 aa18.1■□□□□ 0.49
TVP23B-202ENST00000476139 LNX1Q8TBB1 728 aaPredicted RBP18.1■□□□□ 0.49
TVP23B-202ENST00000476139 FAM71BQ8TC56 605 aa18.1■□□□□ 0.49
TVP23B-202ENST00000476139 STK33Q9BYT3 514 aa18.1■□□□□ 0.49
TVP23B-202ENST00000476139 MYH11P35749 1972 aa18.1■□□□□ 0.49
TVP23B-202ENST00000476139 MYL7Q01449 175 aa18.1■□□□□ 0.49
TVP23B-202ENST00000476139 PPP2R5AQ15172 486 aa18.1■□□□□ 0.49
TVP23B-202ENST00000476139 CFAP221Q4G0U5 840 aa18.1■□□□□ 0.49
TVP23B-202ENST00000476139 DLK2Q6UY11 383 aa18.1■□□□□ 0.49
TVP23B-202ENST00000476139 VSIG10LQ86VR7 867 aa18.1■□□□□ 0.49
TVP23B-202ENST00000476139 C4orf19Q8IY42 314 aa18.1■□□□□ 0.49
TVP23B-202ENST00000476139 LMO3Q8TAP4 145 aa18.1■□□□□ 0.49
TVP23B-202ENST00000476139 PICK1Q9NRD5 415 aa18.1■□□□□ 0.49
TVP23B-202ENST00000476139 GOLGA8IPA6NC78 632 aa18.09■□□□□ 0.49
TVP23B-202ENST00000476139 GOLGA8JA6NMD2 632 aa18.09■□□□□ 0.49
TVP23B-202ENST00000476139 RGS20O76081 388 aa18.09■□□□□ 0.49
TVP23B-202ENST00000476139 GCLMP48507 274 aa18.09■□□□□ 0.49
TVP23B-202ENST00000476139 PSMC5P62195 406 aa18.09■□□□□ 0.49
TVP23B-202ENST00000476139 ITIH3Q06033 890 aa18.09■□□□□ 0.49
TVP23B-202ENST00000476139 TMEM132BQ14DG7 1078 aa18.09■□□□□ 0.49
TVP23B-202ENST00000476139 MAP9Q49MG5 647 aa18.09■□□□□ 0.49
TVP23B-202ENST00000476139 GOLGA5Q8TBA6 731 aa18.09■□□□□ 0.49
TVP23B-202ENST00000476139 TRPM4Q8TD43 1214 aa18.09■□□□□ 0.49
TVP23B-202ENST00000476139 PLEKHO2Q8TD55 490 aa18.09■□□□□ 0.49
TVP23B-202ENST00000476139 APEX2Q9UBZ4 518 aa18.09■□□□□ 0.49
TVP23B-202ENST00000476139 TCEAL9Q9UHQ7 104 aa18.09■□□□□ 0.49
TVP23B-202ENST00000476139 EMSYQ7Z589 1322 aa18.09■□□□□ 0.49
TVP23B-202ENST00000476139 MTFR1LQ9H019 292 aa18.09■□□□□ 0.49
TVP23B-202ENST00000476139 TMEM206Q9H813 350 aa18.09■□□□□ 0.49
TVP23B-202ENST00000476139 ZNF214Q9UL59 606 aaPredicted RBP18.09■□□□□ 0.49
TVP23B-202ENST00000476139 NENFQ9UMX5 172 aa18.09■□□□□ 0.49
TVP23B-202ENST00000476139 WDR64B1ANS9 1081 aa18.09■□□□□ 0.49
TVP23B-202ENST00000476139 FOXN3O00409 490 aaPredicted RBP18.09■□□□□ 0.49
TVP23B-202ENST00000476139 PEX10O60683 326 aa18.09■□□□□ 0.49
TVP23B-202ENST00000476139 LYPLA2O95372 231 aa18.09■□□□□ 0.49
TVP23B-202ENST00000476139 C10orf76Q5T2E6 689 aa18.09■□□□□ 0.49
TVP23B-202ENST00000476139 REPS2Q8NFH8 660 aa18.09■□□□□ 0.49
TVP23B-202ENST00000476139 ACCSQ96QU6 501 aa18.09■□□□□ 0.49
TVP23B-202ENST00000476139 ACBD3Q9H3P7 528 aa18.09■□□□□ 0.49
TVP23B-202ENST00000476139 HSPBP1Q9NZL4 362 aa18.09■□□□□ 0.49
TVP23B-202ENST00000476139 LCMT1Q9UIC8 334 aa18.09■□□□□ 0.49
TVP23B-202ENST00000476139 TSKSQ9UJT2 592 aa18.09■□□□□ 0.49
TVP23B-202ENST00000476139 ZNF112Q9UJU3 913 aa18.09■□□□□ 0.49
TVP23B-202ENST00000476139 ESYT3A0FGR9 886 aa18.08■□□□□ 0.49
TVP23B-202ENST00000476139 CCDC169A6NNP5 214 aa18.08■□□□□ 0.49
TVP23B-202ENST00000476139 FERP16591 822 aa18.08■□□□□ 0.49
TVP23B-202ENST00000476139 MCM3P25205 808 aa18.08■□□□□ 0.49
TVP23B-202ENST00000476139 ACTN2P35609 894 aa18.08■□□□□ 0.49
TVP23B-202ENST00000476139 C1orf220Q5T0J3 134 aa18.08■□□□□ 0.49
TVP23B-202ENST00000476139 DCAF15Q66K64 600 aa18.08■□□□□ 0.49
TVP23B-202ENST00000476139 PALB2Q86YC2 1186 aa18.08■□□□□ 0.49
TVP23B-202ENST00000476139 LRRC57Q8N9N7 239 aa18.08■□□□□ 0.49
TVP23B-202ENST00000476139 SLC30A5Q8TAD4 765 aa18.08■□□□□ 0.49
TVP23B-202ENST00000476139 RABEP2Q9H5N1 569 aa18.08■□□□□ 0.49
TVP23B-202ENST00000476139 ZSCAN5CA6NGD5 496 aaPredicted RBP18.08■□□□□ 0.48
TVP23B-202ENST00000476139 KCNK3O14649 394 aa18.08■□□□□ 0.48
TVP23B-202ENST00000476139 VAMP7P51809 220 aa18.08■□□□□ 0.48
TVP23B-202ENST00000476139 GALCP54803 685 aa18.08■□□□□ 0.48
TVP23B-202ENST00000476139 GTF2BQ00403 316 aa18.08■□□□□ 0.48
TVP23B-202ENST00000476139 OSGEPQ9NPF4 335 aa18.08■□□□□ 0.48
TVP23B-202ENST00000476139 GINM1Q9NU53 330 aa18.08■□□□□ 0.48
TVP23B-202ENST00000476139 ZC3H4Q9UPT8 1303 aaKnown RBP18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms