RNA–Protein interactions for RNA: ENST00000475835.2

LSM2-211, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 211 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-211ENST00000475835 MYLK3Q32MK0 819 aa4.14□□□□□ -1.75
LSM2-211ENST00000475835 LEXMQ3ZCV2 418 aa4.14□□□□□ -1.75
LSM2-211ENST00000475835 SPDYE2Q495Y8 402 aa4.14□□□□□ -1.75
LSM2-211ENST00000475835 C5orf22Q49AR2 442 aa4.14□□□□□ -1.75
LSM2-211ENST00000475835 CDONQ4KMG0 1287 aa4.14□□□□□ -1.75
LSM2-211ENST00000475835 VWA3BQ502W6 1294 aa4.14□□□□□ -1.75
LSM2-211ENST00000475835 ZCWPW2Q504Y3 356 aa4.14□□□□□ -1.75
LSM2-211ENST00000475835 ARHGAP29Q52LW3 1261 aa4.14□□□□□ -1.75
LSM2-211ENST00000475835 KCNT1Q5JUK3 1230 aa4.14□□□□□ -1.75
LSM2-211ENST00000475835 KANK2Q63ZY3 851 aa4.14□□□□□ -1.75
LSM2-211ENST00000475835 DENND2CQ68D51 928 aa4.14□□□□□ -1.75
LSM2-211ENST00000475835 TTBK2Q6IQ55 1244 aa4.14□□□□□ -1.75
LSM2-211ENST00000475835 PRPF40BQ6NWY9 871 aaKnown RBP4.14□□□□□ -1.75
LSM2-211ENST00000475835 METTL2BQ6P1Q9 378 aaKnown RBP4.14□□□□□ -1.75
LSM2-211ENST00000475835 CEP85Q6P2H3 762 aa4.14□□□□□ -1.75
LSM2-211ENST00000475835 CYB5D1Q6P9G0 228 aa4.14□□□□□ -1.75
LSM2-211ENST00000475835 CCDC81Q6ZN84 652 aa4.14□□□□□ -1.75
LSM2-211ENST00000475835 PLEKHM3Q6ZWE6 761 aa4.14□□□□□ -1.75
LSM2-211ENST00000475835 HDXQ7Z353 690 aa4.14□□□□□ -1.75
LSM2-211ENST00000475835 KRT27Q7Z3Y8 459 aa4.14□□□□□ -1.75
LSM2-211ENST00000475835 PPP1R42Q7Z4L9 355 aa4.14□□□□□ -1.75
LSM2-211ENST00000475835 ZER1Q7Z7L7 766 aa4.14□□□□□ -1.75
LSM2-211ENST00000475835 GALNT7Q86SF2 657 aa4.14□□□□□ -1.75
LSM2-211ENST00000475835 FAM83AQ86UY5 434 aa4.14□□□□□ -1.75
LSM2-211ENST00000475835 SULF1Q8IWU6 871 aa4.14□□□□□ -1.75
LSM2-211ENST00000475835 RAVER1Q8IY67 606 aaKnown RBP4.14□□□□□ -1.75
LSM2-211ENST00000475835 TRMT2AQ8IZ69 625 aaKnown RBP4.14□□□□□ -1.75
LSM2-211ENST00000475835 ALDH16A1Q8IZ83 802 aa4.14□□□□□ -1.75
LSM2-211ENST00000475835 CNNM3Q8NE01 707 aa4.14□□□□□ -1.75
LSM2-211ENST00000475835 OR6C4Q8NGE1 309 aa4.14□□□□□ -1.75
LSM2-211ENST00000475835 OR52K1Q8NGK4 314 aa4.14□□□□□ -1.75
LSM2-211ENST00000475835 OR6P1Q8NGX9 317 aa4.14□□□□□ -1.75
LSM2-211ENST00000475835 BCAS4Q8TDM0 211 aa4.14□□□□□ -1.75
LSM2-211ENST00000475835 PANK1Q8TE04 598 aa4.14□□□□□ -1.75
LSM2-211ENST00000475835 COL26A1Q96A83 441 aa4.14□□□□□ -1.75
LSM2-211ENST00000475835 GMCL1Q96IK5 515 aa4.14□□□□□ -1.75
LSM2-211ENST00000475835 FGD4Q96M96 766 aa4.14□□□□□ -1.75
LSM2-211ENST00000475835 JAKMIP1Q96N16 626 aaKnown RBP4.14□□□□□ -1.75
LSM2-211ENST00000475835 SETDB2Q96T68 719 aa4.14□□□□□ -1.75
LSM2-211ENST00000475835 CIB1Q99828 191 aa4.14□□□□□ -1.75
LSM2-211ENST00000475835 KIFC3Q9BVG8 833 aa4.14□□□□□ -1.75
LSM2-211ENST00000475835 CCDC106Q9BWC9 280 aa4.14□□□□□ -1.75
LSM2-211ENST00000475835 OSBPL1AQ9BXW6 950 aa4.14□□□□□ -1.75
LSM2-211ENST00000475835 WNT5BQ9H1J7 359 aa4.14□□□□□ -1.75
LSM2-211ENST00000475835 ADNPQ9H2P0 1102 aa4.14□□□□□ -1.75
LSM2-211ENST00000475835 KCNF1Q9H3M0 494 aa4.14□□□□□ -1.75
LSM2-211ENST00000475835 MMRN2Q9H8L6 949 aa4.14□□□□□ -1.75
LSM2-211ENST00000475835 CCDC177Q9NQR7 707 aaPredicted RBP4.14□□□□□ -1.75
LSM2-211ENST00000475835 INIPQ9NRY2 104 aa4.14□□□□□ -1.75
LSM2-211ENST00000475835 PCMTD2Q9NV79 361 aa4.14□□□□□ -1.75
LSM2-211ENST00000475835 THAP1Q9NVV9 213 aa4.14□□□□□ -1.75
LSM2-211ENST00000475835 TAS2R7Q9NYW3 318 aa4.14□□□□□ -1.75
LSM2-211ENST00000475835 FNIP2Q9P278 1114 aa4.14□□□□□ -1.75
LSM2-211ENST00000475835 ARHGAP28Q9P2N2 729 aa4.14□□□□□ -1.75
LSM2-211ENST00000475835 DBF4Q9UBU7 674 aaPredicted RBP4.14□□□□□ -1.75
LSM2-211ENST00000475835 SH3BGRL2Q9UJC5 107 aa4.14□□□□□ -1.75
LSM2-211ENST00000475835 CLEC4AQ9UMR7 237 aa4.14□□□□□ -1.75
LSM2-211ENST00000475835 MED16Q9Y2X0 877 aa4.14□□□□□ -1.75
LSM2-211ENST00000475835 TSC22D4Q9Y3Q8 395 aa4.14□□□□□ -1.75
LSM2-211ENST00000475835 NFE2L3Q9Y4A8 694 aa4.14□□□□□ -1.75
LSM2-211ENST00000475835 AFG3L2Q9Y4W6 797 aa4.14□□□□□ -1.75
LSM2-211ENST00000475835 FRMPD1Q5SYB0 1578 aa4.14□□□□□ -1.75
LSM2-211ENST00000475835 UGGT1Q9NYU2 1555 aa4.14□□□□□ -1.75
LSM2-211ENST00000475835 CAMSAP1Q5T5Y3 1602 aa4.13□□□□□ -1.75
LSM2-211ENST00000475835 TRAPPC8Q9Y2L5 1435 aa4.13□□□□□ -1.75
LSM2-211ENST00000475835 ZNF518AQ6AHZ1 1483 aa4.13□□□□□ -1.75
LSM2-211ENST00000475835 A0A0G2JPF8 293 aa4.13□□□□□ -1.75
LSM2-211ENST00000475835 KANSL1LA0AUZ9 987 aa4.13□□□□□ -1.75
LSM2-211ENST00000475835 HNRNPCL3B7ZW38 293 aa4.13□□□□□ -1.75
LSM2-211ENST00000475835 E7ENQ6 273 aa4.13□□□□□ -1.75
LSM2-211ENST00000475835 CACNB4O00305 520 aaPredicted RBP4.13□□□□□ -1.75
LSM2-211ENST00000475835 IGF2BP3O00425 579 aaKnown RBP eCLIP4.13□□□□□ -1.75
LSM2-211ENST00000475835 CDK2AP1O14519 115 aa4.13□□□□□ -1.75
LSM2-211ENST00000475835 HGSO14964 777 aaPredicted RBP4.13□□□□□ -1.75
LSM2-211ENST00000475835 FYB1O15117 783 aa4.13□□□□□ -1.75
LSM2-211ENST00000475835 KPNA5O15131 536 aa4.13□□□□□ -1.75
LSM2-211ENST00000475835 SUPT3HO75486 399 aa4.13□□□□□ -1.75
LSM2-211ENST00000475835 GLRX3O76003 335 aaKnown RBP4.13□□□□□ -1.75
LSM2-211ENST00000475835 USP1O94782 785 aa4.13□□□□□ -1.75
LSM2-211ENST00000475835 TGDSO95455 350 aa4.13□□□□□ -1.75
LSM2-211ENST00000475835 DDX58O95786 925 aaKnown RBP4.13□□□□□ -1.75
LSM2-211ENST00000475835 CD4P01730 458 aa4.13□□□□□ -1.75
LSM2-211ENST00000475835 LMNAP02545 664 aaKnown RBP4.13□□□□□ -1.75
LSM2-211ENST00000475835 HMGN1P05114 100 aa4.13□□□□□ -1.75
LSM2-211ENST00000475835 P4HBP07237 508 aaKnown RBP4.13□□□□□ -1.75
LSM2-211ENST00000475835 RETP07949 1114 aa4.13□□□□□ -1.75
LSM2-211ENST00000475835 NR3C2P08235 984 aa4.13□□□□□ -1.75
LSM2-211ENST00000475835 CLTAP09496 248 aa4.13□□□□□ -1.75
LSM2-211ENST00000475835 C6orf222P0C671 652 aaPredicted RBP4.13□□□□□ -1.75
LSM2-211ENST00000475835 UBTFL6P0CB48 400 aaPredicted RBP4.13□□□□□ -1.75
LSM2-211ENST00000475835 HNRNPCL4P0DMR1 293 aa4.13□□□□□ -1.75
LSM2-211ENST00000475835 ACAT1P24752 427 aaKnown RBP4.13□□□□□ -1.75
LSM2-211ENST00000475835 CTNNA2P26232 953 aa4.13□□□□□ -1.75
LSM2-211ENST00000475835 TARSP26639 723 aaKnown RBP4.13□□□□□ -1.75
LSM2-211ENST00000475835 VARSP26640 1264 aaKnown RBP4.13□□□□□ -1.75
LSM2-211ENST00000475835 PBLDP30039 288 aaPredicted RBP4.13□□□□□ -1.75
LSM2-211ENST00000475835 CDC25BP30305 580 aa4.13□□□□□ -1.75
LSM2-211ENST00000475835 RAD52P43351 418 aa4.13□□□□□ -1.75
LSM2-211ENST00000475835 ATP5OP48047 213 aa4.13□□□□□ -1.75
LSM2-211ENST00000475835 RXRGP48443 463 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms