RNA–Protein interactions for RNA: ENST00000475732.1

DMD-223, Transcript of dystrophin, human

TSL 5

Gene DMD, Length 669 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DMD-223	ENST00000475732	ARL2	P36404	184 aa		11.11	□□□□□ -0.63
DMD-223	ENST00000475732	GPC3	P51654	580 aa		11.11	□□□□□ -0.63
DMD-223	ENST00000475732	CRYBB1	P53674	252 aa	Predicted RBP	11.11	□□□□□ -0.63
DMD-223	ENST00000475732	LAMTOR4	Q0VGL1	99 aa		11.11	□□□□□ -0.63
DMD-223	ENST00000475732	MMRN1	Q13201	1228 aa		11.11	□□□□□ -0.63
DMD-223	ENST00000475732	DHX8	Q14562	1220 aa	Known RBP	11.11	□□□□□ -0.63
DMD-223	ENST00000475732	E2F4	Q16254	413 aa		11.11	□□□□□ -0.63
DMD-223	ENST00000475732	KIZ	Q2M2Z5	673 aa		11.11	□□□□□ -0.63
DMD-223	ENST00000475732	TPRN	Q4KMQ1	711 aa		11.11	□□□□□ -0.63
DMD-223	ENST00000475732	NAALADL2	Q58DX5	795 aa		11.11	□□□□□ -0.63
DMD-223	ENST00000475732	C1orf186	Q6ZWK4	172 aa		11.11	□□□□□ -0.63
DMD-223	ENST00000475732	SV2B	Q7L1I2	683 aa		11.11	□□□□□ -0.63
DMD-223	ENST00000475732	DEFB128	Q7Z7B8	93 aa		11.11	□□□□□ -0.63
DMD-223	ENST00000475732	ZNF410	Q86VK4	478 aa		11.11	□□□□□ -0.63
DMD-223	ENST00000475732	GPBP1	Q86WP2	473 aa		11.11	□□□□□ -0.63
DMD-223	ENST00000475732	NLRP7	Q8WX94	980 aa		11.11	□□□□□ -0.63
DMD-223	ENST00000475732	KIFAP3	Q92845	792 aa		11.11	□□□□□ -0.63
DMD-223	ENST00000475732	DHX58	Q96C10	678 aa		11.11	□□□□□ -0.63
DMD-223	ENST00000475732	SCLT1	Q96NL6	688 aa		11.11	□□□□□ -0.63
DMD-223	ENST00000475732	PPP1R16B	Q96T49	567 aa		11.11	□□□□□ -0.63
DMD-223	ENST00000475732	RUSC1	Q9BVN2	902 aa		11.11	□□□□□ -0.63
DMD-223	ENST00000475732	TIPIN	Q9BVW5	301 aa		11.11	□□□□□ -0.63
DMD-223	ENST00000475732	POLR3F	Q9H1D9	316 aa	Predicted RBP	11.11	□□□□□ -0.63
DMD-223	ENST00000475732	ADAMTS10	Q9H324	1103 aa		11.11	□□□□□ -0.63
DMD-223	ENST00000475732	IL23A	Q9NPF7	189 aa		11.11	□□□□□ -0.63
DMD-223	ENST00000475732	GINS2	Q9Y248	185 aa		11.11	□□□□□ -0.63
DMD-223	ENST00000475732	SQOR	Q9Y6N5	450 aa		11.11	□□□□□ -0.63
DMD-223	ENST00000475732		A0A087WZ62	844 aa		11.1	□□□□□ -0.63
DMD-223	ENST00000475732	NBN	O60934	754 aa		11.1	□□□□□ -0.63
DMD-223	ENST00000475732	CXCL10	P02778	98 aa		11.1	□□□□□ -0.63
DMD-223	ENST00000475732	KRT18	P05783	430 aa	Known RBP	11.1	□□□□□ -0.63
DMD-223	ENST00000475732	GUCY2C	P25092	1073 aa		11.1	□□□□□ -0.63
DMD-223	ENST00000475732	RAD51AP2	Q09MP3	1159 aa		11.1	□□□□□ -0.63
DMD-223	ENST00000475732	TFDP1	Q14186	410 aa		11.1	□□□□□ -0.63
DMD-223	ENST00000475732	MBTPS1	Q14703	1052 aa		11.1	□□□□□ -0.63
DMD-223	ENST00000475732	GPNMB	Q14956	572 aa		11.1	□□□□□ -0.63
DMD-223	ENST00000475732	FBXO47	Q5MNV8	452 aa		11.1	□□□□□ -0.63
DMD-223	ENST00000475732	CLEC17A	Q6ZS10	378 aa		11.1	□□□□□ -0.63
DMD-223	ENST00000475732	TSHZ1	Q6ZSZ6	1077 aa		11.1	□□□□□ -0.63
DMD-223	ENST00000475732	KSR1	Q8IVT5	923 aa		11.1	□□□□□ -0.63
DMD-223	ENST00000475732	FSIP1	Q8NA03	581 aa		11.1	□□□□□ -0.63
DMD-223	ENST00000475732	USP38	Q8NB14	1042 aa		11.1	□□□□□ -0.63
DMD-223	ENST00000475732	MRPS27	Q92552	414 aa	Known RBP	11.1	□□□□□ -0.63
DMD-223	ENST00000475732	ZNF668	Q96K58	619 aa	Predicted RBP	11.1	□□□□□ -0.63
DMD-223	ENST00000475732	DRC1	Q96MC2	740 aa		11.1	□□□□□ -0.63
DMD-223	ENST00000475732	NLRP4	Q96MN2	994 aa		11.1	□□□□□ -0.63
DMD-223	ENST00000475732	OSMR	Q99650	979 aa		11.1	□□□□□ -0.63
DMD-223	ENST00000475732	GDF15	Q99988	308 aa		11.1	□□□□□ -0.63
DMD-223	ENST00000475732	FDXACB1	Q9BRP7	624 aa	Predicted RBP	11.1	□□□□□ -0.63
DMD-223	ENST00000475732	GCOM2	Q9BZD3	368 aa	Predicted RBP	11.1	□□□□□ -0.63
DMD-223	ENST00000475732	INO80B	Q9C086	356 aa	Predicted RBP	11.1	□□□□□ -0.63
DMD-223	ENST00000475732	LRRC27	Q9C0I9	530 aa		11.1	□□□□□ -0.63
DMD-223	ENST00000475732	MAGEF1	Q9HAY2	307 aa		11.1	□□□□□ -0.63
DMD-223	ENST00000475732	CDHR5	Q9HBB8	845 aa		11.1	□□□□□ -0.63
DMD-223	ENST00000475732	GPRC5C	Q9NQ84	441 aa		11.1	□□□□□ -0.63
DMD-223	ENST00000475732	HPSE	Q9Y251	543 aa		11.1	□□□□□ -0.63
DMD-223	ENST00000475732	FAM237A	A0A1B0GTK4	181 aa		11.09	□□□□□ -0.63
DMD-223	ENST00000475732	HIP1R	O75146	1068 aa		11.09	□□□□□ -0.63
DMD-223	ENST00000475732	RPS6KA5	O75582	802 aa		11.09	□□□□□ -0.63
DMD-223	ENST00000475732	SRGAP2C	P0DJJ0	459 aa		11.09	□□□□□ -0.63
DMD-223	ENST00000475732	ACR	P10323	421 aa		11.09	□□□□□ -0.63
DMD-223	ENST00000475732	GHR	P10912	638 aa		11.09	□□□□□ -0.63
DMD-223	ENST00000475732	GLRA2	P23416	452 aa		11.09	□□□□□ -0.63
DMD-223	ENST00000475732	EIF4B	P23588	611 aa	Known RBP	11.09	□□□□□ -0.63
DMD-223	ENST00000475732	SYK	P43405	635 aa		11.09	□□□□□ -0.63
DMD-223	ENST00000475732	AMPD3	Q01432	767 aa		11.09	□□□□□ -0.63
DMD-223	ENST00000475732	POU5F1B	Q06416	359 aa		11.09	□□□□□ -0.63
DMD-223	ENST00000475732	LPIN1	Q14693	890 aa		11.09	□□□□□ -0.63
DMD-223	ENST00000475732	PPP2R5A	Q15172	486 aa		11.09	□□□□□ -0.63
DMD-223	ENST00000475732	ARSH	Q5FYA8	562 aa		11.09	□□□□□ -0.63
DMD-223	ENST00000475732	ODR4	Q5SWX8	454 aa		11.09	□□□□□ -0.63
DMD-223	ENST00000475732	PSRC1	Q6PGN9	363 aa	Predicted RBP	11.09	□□□□□ -0.63
DMD-223	ENST00000475732	CEP57L1	Q8IYX8	460 aa		11.09	□□□□□ -0.63
DMD-223	ENST00000475732	TMEM87A	Q8NBN3	555 aa		11.09	□□□□□ -0.63
DMD-223	ENST00000475732	RNF149	Q8NC42	400 aa		11.09	□□□□□ -0.63
DMD-223	ENST00000475732	ASAP3	Q8TDY4	903 aa		11.09	□□□□□ -0.63
DMD-223	ENST00000475732	APBB2	Q92870	758 aa		11.09	□□□□□ -0.63
DMD-223	ENST00000475732	IFT74	Q96LB3	600 aa		11.09	□□□□□ -0.63
DMD-223	ENST00000475732	GBP4	Q96PP9	640 aa		11.09	□□□□□ -0.63
DMD-223	ENST00000475732	IFIH1	Q9BYX4	1025 aa	Known RBP	11.09	□□□□□ -0.63
DMD-223	ENST00000475732	UBE2O	Q9C0C9	1292 aa	Known RBP	11.09	□□□□□ -0.63
DMD-223	ENST00000475732	TNMD	Q9H2S6	317 aa		11.09	□□□□□ -0.63
DMD-223	ENST00000475732	C17orf75	Q9HAS0	396 aa		11.09	□□□□□ -0.63
DMD-223	ENST00000475732	USP25	Q9UHP3	1055 aa		11.09	□□□□□ -0.63
DMD-223	ENST00000475732	KCNG1	Q9UIX4	513 aa		11.09	□□□□□ -0.63
DMD-223	ENST00000475732	ODF2L	Q9ULJ1	636 aa		11.09	□□□□□ -0.63
DMD-223	ENST00000475732	MICAL3	Q7RTP6	2002 aa		11.08	□□□□□ -0.64
DMD-223	ENST00000475732	NPHP3-ACAD11	A0A0J9YXS1	232 aa		11.08	□□□□□ -0.64
DMD-223	ENST00000475732	GPR182	O15218	404 aa		11.08	□□□□□ -0.64
DMD-223	ENST00000475732	FGB	P02675	491 aa		11.08	□□□□□ -0.64
DMD-223	ENST00000475732	SLFN14	P0C7P3	912 aa		11.08	□□□□□ -0.64
DMD-223	ENST00000475732	ACTN1	P12814	892 aa		11.08	□□□□□ -0.64
DMD-223	ENST00000475732	DARS	P14868	501 aa	Known RBP	11.08	□□□□□ -0.64
DMD-223	ENST00000475732	CD52	P31358	61 aa		11.08	□□□□□ -0.64
DMD-223	ENST00000475732	BMP8B	P34820	402 aa		11.08	□□□□□ -0.64
DMD-223	ENST00000475732	NAMPT	P43490	491 aa		11.08	□□□□□ -0.64
DMD-223	ENST00000475732	PHKA2	P46019	1235 aa		11.08	□□□□□ -0.64
DMD-223	ENST00000475732	NDUFA8	P51970	172 aa		11.08	□□□□□ -0.64
DMD-223	ENST00000475732	EPHB4	P54760	987 aa		11.08	□□□□□ -0.64
DMD-223	ENST00000475732	PAK2	Q13177	524 aa		11.08	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 51 ms