RNA–Protein interactions for RNA: ENST00000475558.5

SHQ1-207, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-207ENST00000475558 NOC3LQ8WTT2 800 aaKnown RBP7.78□□□□□ -1.16
SHQ1-207ENST00000475558 EMID1Q96A84 441 aaPredicted RBP7.78□□□□□ -1.16
SHQ1-207ENST00000475558 CCDC43Q96MW1 224 aaKnown RBP7.78□□□□□ -1.16
SHQ1-207ENST00000475558 PNMA5Q96PV4 448 aa7.78□□□□□ -1.16
SHQ1-207ENST00000475558 TRIM9Q9C026 710 aa7.78□□□□□ -1.16
SHQ1-207ENST00000475558 AP5M1Q9H0R1 490 aa7.78□□□□□ -1.16
SHQ1-207ENST00000475558 UNC45AQ9H3U1 944 aa7.78□□□□□ -1.16
SHQ1-207ENST00000475558 SMARCAD1Q9H4L7 1026 aa7.78□□□□□ -1.16
SHQ1-207ENST00000475558 GRPEL1Q9HAV7 217 aa7.78□□□□□ -1.16
SHQ1-207ENST00000475558 EXOC1Q9NV70 894 aa7.78□□□□□ -1.16
SHQ1-207ENST00000475558 ODF2LQ9ULJ1 636 aa7.78□□□□□ -1.16
SHQ1-207ENST00000475558 YBX2Q9Y2T7 364 aaKnown RBP7.78□□□□□ -1.16
SHQ1-207ENST00000475558 SLC4A7Q9Y6M7 1214 aa7.78□□□□□ -1.16
SHQ1-207ENST00000475558 PHLPP2Q6ZVD8 1323 aa7.78□□□□□ -1.16
SHQ1-207ENST00000475558 GBF1Q92538 1859 aa7.77□□□□□ -1.17
SHQ1-207ENST00000475558 PRRC2BQ5JSZ5 2229 aaKnown RBP7.77□□□□□ -1.17
SHQ1-207ENST00000475558 ARHGEF35A5YM69 484 aa7.77□□□□□ -1.17
SHQ1-207ENST00000475558 NOP56O00567 594 aaKnown RBP7.77□□□□□ -1.17
SHQ1-207ENST00000475558 PSMA7O14818 248 aa7.77□□□□□ -1.17
SHQ1-207ENST00000475558 ADCY6O43306 1168 aa7.77□□□□□ -1.17
SHQ1-207ENST00000475558 GAS2O43903 313 aaKnown RBP7.77□□□□□ -1.17
SHQ1-207ENST00000475558 ATP9AO75110 1047 aa7.77□□□□□ -1.17
SHQ1-207ENST00000475558 MED24O75448 989 aa7.77□□□□□ -1.17
SHQ1-207ENST00000475558 GH1P01241 217 aa7.77□□□□□ -1.17
SHQ1-207ENST00000475558 TPM3P06753 285 aa7.77□□□□□ -1.17
SHQ1-207ENST00000475558 PFKMP08237 780 aa7.77□□□□□ -1.17
SHQ1-207ENST00000475558 TXNP10599 105 aaKnown RBP7.77□□□□□ -1.17
SHQ1-207ENST00000475558 POU3F3P20264 500 aaPredicted RBP7.77□□□□□ -1.17
SHQ1-207ENST00000475558 GUCY2CP25092 1073 aa7.77□□□□□ -1.17
SHQ1-207ENST00000475558 STAT5BP51692 787 aa7.77□□□□□ -1.17
SHQ1-207ENST00000475558 SLC12A3P55017 1021 aa7.77□□□□□ -1.17
SHQ1-207ENST00000475558 CCL23P55773 120 aa7.77□□□□□ -1.17
SHQ1-207ENST00000475558 ACTR2P61160 394 aa7.77□□□□□ -1.17
SHQ1-207ENST00000475558 ASIC1P78348 528 aa7.77□□□□□ -1.17
SHQ1-207ENST00000475558 BEX3Q00994 111 aa7.77□□□□□ -1.17
SHQ1-207ENST00000475558 PNOCQ13519 176 aa7.77□□□□□ -1.17
SHQ1-207ENST00000475558 ITGA7Q13683 1181 aa7.77□□□□□ -1.17
SHQ1-207ENST00000475558 SKIV2LQ15477 1246 aaKnown RBP7.77□□□□□ -1.17
SHQ1-207ENST00000475558 ANO6Q4KMQ2 910 aa7.77□□□□□ -1.17
SHQ1-207ENST00000475558 CCDC62Q6P9F0 684 aa7.77□□□□□ -1.17
SHQ1-207ENST00000475558 CXCL17Q6UXB2 119 aa7.77□□□□□ -1.17
SHQ1-207ENST00000475558 ABHD15Q6UXT9 468 aa7.77□□□□□ -1.17
SHQ1-207ENST00000475558 MICALL1Q8N3F8 863 aa7.77□□□□□ -1.17
SHQ1-207ENST00000475558 ANKK1Q8NFD2 765 aa7.77□□□□□ -1.17
SHQ1-207ENST00000475558 AFAP1L1Q8TED9 768 aa7.77□□□□□ -1.17
SHQ1-207ENST00000475558 DDX12PQ92771 950 aa7.77□□□□□ -1.17
SHQ1-207ENST00000475558 DDX27Q96GQ7 796 aaKnown RBP7.77□□□□□ -1.17
SHQ1-207ENST00000475558 DYDC2Q96IM9 177 aa7.77□□□□□ -1.17
SHQ1-207ENST00000475558 FGD4Q96M96 766 aa7.77□□□□□ -1.17
SHQ1-207ENST00000475558 DRC1Q96MC2 740 aa7.77□□□□□ -1.17
SHQ1-207ENST00000475558 CTAGE1Q96RT6 745 aa7.77□□□□□ -1.17
SHQ1-207ENST00000475558 KATNBL1Q9H079 304 aa7.77□□□□□ -1.17
SHQ1-207ENST00000475558 BLOC1S4Q9NUP1 217 aa7.77□□□□□ -1.17
SHQ1-207ENST00000475558 LARSQ9P2J5 1176 aaKnown RBP7.77□□□□□ -1.17
SHQ1-207ENST00000475558 CGNQ9P2M7 1197 aaKnown RBP7.77□□□□□ -1.17
SHQ1-207ENST00000475558 MAN1B1Q9UKM7 699 aa7.77□□□□□ -1.17
SHQ1-207ENST00000475558 COG5Q9UP83 839 aa7.77□□□□□ -1.17
SHQ1-207ENST00000475558 MAFBQ9Y5Q3 323 aaPredicted RBP7.77□□□□□ -1.17
SHQ1-207ENST00000475558 CHD9Q3L8U1 2897 aa7.77□□□□□ -1.17
SHQ1-207ENST00000475558 BAZ2BQ9UIF8 2168 aaKnown RBP7.77□□□□□ -1.17
SHQ1-207ENST00000475558 A0A087X0B3 334 aa7.76□□□□□ -1.17
SHQ1-207ENST00000475558 IGKV6D-21A0A0A0MT36 114 aa7.76□□□□□ -1.17
SHQ1-207ENST00000475558 PP2D1A8MPX8 630 aa7.76□□□□□ -1.17
SHQ1-207ENST00000475558 ZBBXA8MT70 800 aa7.76□□□□□ -1.17
SHQ1-207ENST00000475558 EML1O00423 815 aa7.76□□□□□ -1.17
SHQ1-207ENST00000475558 BACH1O14867 736 aa7.76□□□□□ -1.17
SHQ1-207ENST00000475558 DYNC1LI2O43237 492 aaPredicted RBP7.76□□□□□ -1.17
SHQ1-207ENST00000475558 CBFA2T2O43439 604 aa7.76□□□□□ -1.17
SHQ1-207ENST00000475558 TBCAO75347 108 aaKnown RBP7.76□□□□□ -1.17
SHQ1-207ENST00000475558 DGAT1O75907 488 aa7.76□□□□□ -1.17
SHQ1-207ENST00000475558 TPM2P07951 284 aa7.76□□□□□ -1.17
SHQ1-207ENST00000475558 SUPT20HL2P0C7V6 817 aa7.76□□□□□ -1.17
SHQ1-207ENST00000475558 ATP2A2P16615 1042 aaKnown RBP7.76□□□□□ -1.17
SHQ1-207ENST00000475558 CYP11B2P19099 503 aa7.76□□□□□ -1.17
SHQ1-207ENST00000475558 CDK11BP21127 795 aaKnown RBP7.76□□□□□ -1.17
SHQ1-207ENST00000475558 YWHABP31946 246 aaKnown RBP7.76□□□□□ -1.17
SHQ1-207ENST00000475558 RFC5P40937 340 aa7.76□□□□□ -1.17
SHQ1-207ENST00000475558 RABGGTBP53611 331 aa7.76□□□□□ -1.17
SHQ1-207ENST00000475558 SMTNP53814 917 aa7.76□□□□□ -1.17
SHQ1-207ENST00000475558 SPAG1Q07617 926 aa7.76□□□□□ -1.17
SHQ1-207ENST00000475558 ITGB3BPQ13352 177 aaPredicted RBP7.76□□□□□ -1.17
SHQ1-207ENST00000475558 CUL4BQ13620 913 aa7.76□□□□□ -1.17
SHQ1-207ENST00000475558 MCM6Q14566 821 aa7.76□□□□□ -1.17
SHQ1-207ENST00000475558 FSCN1Q16658 493 aaKnown RBP7.76□□□□□ -1.17
SHQ1-207ENST00000475558 DUSP28Q4G0W2 176 aa7.76□□□□□ -1.17
SHQ1-207ENST00000475558 HERC4Q5GLZ8 1057 aaPredicted RBP7.76□□□□□ -1.17
SHQ1-207ENST00000475558 SPATA1Q5VX52 437 aa7.76□□□□□ -1.17
SHQ1-207ENST00000475558 RINT1Q6NUQ1 792 aa7.76□□□□□ -1.17
SHQ1-207ENST00000475558 SWSAP1Q6NVH7 229 aa7.76□□□□□ -1.17
SHQ1-207ENST00000475558 CYFIP1Q7L576 1253 aa7.76□□□□□ -1.17
SHQ1-207ENST00000475558 TLK2Q86UE8 772 aa7.76□□□□□ -1.17
SHQ1-207ENST00000475558 GPBP1Q86WP2 473 aa7.76□□□□□ -1.17
SHQ1-207ENST00000475558 GUF1Q8N442 669 aaKnown RBP7.76□□□□□ -1.17
SHQ1-207ENST00000475558 MCPH1Q8NEM0 835 aa7.76□□□□□ -1.17
SHQ1-207ENST00000475558 IL31RAQ8NI17 732 aa7.76□□□□□ -1.17
SHQ1-207ENST00000475558 GOLGA5Q8TBA6 731 aa7.76□□□□□ -1.17
SHQ1-207ENST00000475558 BBXQ8WY36 941 aaPredicted RBP7.76□□□□□ -1.17
SHQ1-207ENST00000475558 KIFAP3Q92845 792 aa7.76□□□□□ -1.17
SHQ1-207ENST00000475558 NECAB3Q96P71 396 aaPredicted RBP7.76□□□□□ -1.17
SHQ1-207ENST00000475558 TSG101Q99816 390 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms