RNA–Protein interactions for RNA: ENST00000474956.1

RNF220-211, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 3,303 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-211ENST00000474956 NOX5Q96PH1 765 aa13.55□□□□□ -0.24
RNF220-211ENST00000474956 SPAG5Q96R06 1193 aa13.55□□□□□ -0.24
RNF220-211ENST00000474956 EDEM3Q9BZQ6 932 aa13.55□□□□□ -0.24
RNF220-211ENST00000474956 OLFML3Q9NRN5 406 aa13.55□□□□□ -0.24
RNF220-211ENST00000474956 AGPAT3Q9NRZ7 376 aa13.55□□□□□ -0.24
RNF220-211ENST00000474956 CNOT7Q9UIV1 285 aaKnown RBP13.55□□□□□ -0.24
RNF220-211ENST00000474956 ZNF541Q9H0D2 1346 aa13.55□□□□□ -0.24
RNF220-211ENST00000474956 ARHGEF35A5YM69 484 aa13.55□□□□□ -0.24
RNF220-211ENST00000474956 ZSCAN5CA6NGD5 496 aaPredicted RBP13.55□□□□□ -0.24
RNF220-211ENST00000474956 GFPT2O94808 682 aa13.55□□□□□ -0.24
RNF220-211ENST00000474956 CCNE2O96020 404 aa13.55□□□□□ -0.24
RNF220-211ENST00000474956 MAP3K10Q02779 954 aa13.55□□□□□ -0.24
RNF220-211ENST00000474956 TTMPQ5BVD1 217 aa13.55□□□□□ -0.24
RNF220-211ENST00000474956 FKBP1CQ5VVH2 108 aa13.55□□□□□ -0.24
RNF220-211ENST00000474956 B4GALNT4Q76KP1 1039 aa13.55□□□□□ -0.24
RNF220-211ENST00000474956 FRMD5Q7Z6J6 570 aa13.55□□□□□ -0.24
RNF220-211ENST00000474956 SLC38A10Q9HBR0 1119 aa13.55□□□□□ -0.24
RNF220-211ENST00000474956 SSU72P8A0A1W2PR75 194 aa13.54□□□□□ -0.24
RNF220-211ENST00000474956 TESPA1A2RU30 521 aaPredicted RBP13.54□□□□□ -0.24
RNF220-211ENST00000474956 LIG3P49916 1009 aa13.54□□□□□ -0.24
RNF220-211ENST00000474956 PPP4R3CPQ6ZMV5 832 aa13.54□□□□□ -0.24
RNF220-211ENST00000474956 CBWD1Q9BRT8 395 aa13.54□□□□□ -0.24
RNF220-211ENST00000474956 AGO4Q9HCK5 861 aaKnown RBP13.54□□□□□ -0.24
RNF220-211ENST00000474956 RBM12Q9NTZ6 932 aaKnown RBP13.54□□□□□ -0.24
RNF220-211ENST00000474956 HMGCS2P54868 508 aa13.54□□□□□ -0.24
RNF220-211ENST00000474956 MTMR1Q13613 665 aa13.54□□□□□ -0.24
RNF220-211ENST00000474956 SLC18A3Q16572 532 aa13.54□□□□□ -0.24
RNF220-211ENST00000474956 MCTP2Q6DN12 878 aa13.54□□□□□ -0.24
RNF220-211ENST00000474956 PALB2Q86YC2 1186 aa13.54□□□□□ -0.24
RNF220-211ENST00000474956 TRPM4Q8TD43 1214 aa13.54□□□□□ -0.24
RNF220-211ENST00000474956 ZIM3Q96PE6 472 aa13.54□□□□□ -0.24
RNF220-211ENST00000474956 NACC1Q96RE7 527 aa13.54□□□□□ -0.24
RNF220-211ENST00000474956 COL11A1P12107 1806 aaPredicted RBP13.54□□□□□ -0.24
RNF220-211ENST00000474956 GOLGA8IPA6NC78 632 aa13.54□□□□□ -0.24
RNF220-211ENST00000474956 GOLGA8JA6NMD2 632 aa13.54□□□□□ -0.24
RNF220-211ENST00000474956 K7ENM7 598 aa13.54□□□□□ -0.24
RNF220-211ENST00000474956 BACH1O14867 736 aa13.54□□□□□ -0.24
RNF220-211ENST00000474956 FOXR2Q6PJQ5 311 aa13.54□□□□□ -0.24
RNF220-211ENST00000474956 ARHGAP27Q6ZUM4 889 aa13.54□□□□□ -0.24
RNF220-211ENST00000474956 AIPL1Q9NZN9 384 aa13.54□□□□□ -0.24
RNF220-211ENST00000474956 CHORDC1Q9UHD1 332 aaPredicted RBP13.54□□□□□ -0.24
RNF220-211ENST00000474956 SYNPO2Q9UMS6 1093 aa13.54□□□□□ -0.24
RNF220-211ENST00000474956 RPTORQ8N122 1335 aa13.53□□□□□ -0.24
RNF220-211ENST00000474956 ATXN2Q99700 1313 aaKnown RBP13.53□□□□□ -0.24
RNF220-211ENST00000474956 NDUFAB1O14561 156 aa13.53□□□□□ -0.24
RNF220-211ENST00000474956 HOXA7P31268 230 aaPredicted RBP13.53□□□□□ -0.24
RNF220-211ENST00000474956 BAATQ14032 418 aaPredicted RBP13.53□□□□□ -0.24
RNF220-211ENST00000474956 PGM5Q15124 567 aa13.53□□□□□ -0.24
RNF220-211ENST00000474956 TRADDQ15628 312 aa13.53□□□□□ -0.24
RNF220-211ENST00000474956 SPATS2Q86XZ4 545 aaKnown RBP13.53□□□□□ -0.24
RNF220-211ENST00000474956 OLIG1Q8TAK6 271 aa13.53□□□□□ -0.24
RNF220-211ENST00000474956 RMDN3Q96TC7 470 aa13.53□□□□□ -0.24
RNF220-211ENST00000474956 ACP6Q9NPH0 428 aa13.53□□□□□ -0.24
RNF220-211ENST00000474956 FSTL1Q12841 308 aa13.53□□□□□ -0.24
RNF220-211ENST00000474956 PAK2Q13177 524 aa13.53□□□□□ -0.24
RNF220-211ENST00000474956 CFAP58Q5T655 872 aa13.53□□□□□ -0.24
RNF220-211ENST00000474956 ANGEL2Q5VTE6 544 aaKnown RBP13.53□□□□□ -0.24
RNF220-211ENST00000474956 NLGN2Q8NFZ4 835 aa13.53□□□□□ -0.24
RNF220-211ENST00000474956 PLEKHO2Q8TD55 490 aa13.53□□□□□ -0.24
RNF220-211ENST00000474956 WRNIP1Q96S55 665 aa13.53□□□□□ -0.24
RNF220-211ENST00000474956 RABEP2Q9H5N1 569 aa13.53□□□□□ -0.24
RNF220-211ENST00000474956 GDF3Q9NR23 364 aa13.53□□□□□ -0.24
RNF220-211ENST00000474956 ESYT3A0FGR9 886 aa13.52□□□□□ -0.24
RNF220-211ENST00000474956 GRID2IPA4D2P6 1211 aa13.52□□□□□ -0.24
RNF220-211ENST00000474956 RARRES1P49788 294 aa13.52□□□□□ -0.24
RNF220-211ENST00000474956 ZNF131P52739 623 aa13.52□□□□□ -0.24
RNF220-211ENST00000474956 ARHGAP44Q17R89 818 aa13.52□□□□□ -0.24
RNF220-211ENST00000474956 SYCP3Q8IZU3 236 aa13.52□□□□□ -0.24
RNF220-211ENST00000474956 IQCKQ8N0W5 287 aa13.52□□□□□ -0.24
RNF220-211ENST00000474956 LUC7LQ9NQ29 371 aaKnown RBP13.52□□□□□ -0.24
RNF220-211ENST00000474956 PPP1R9AQ9ULJ8 1098 aa13.52□□□□□ -0.24
RNF220-211ENST00000474956 CEP350Q5VT06 3117 aa13.52□□□□□ -0.24
RNF220-211ENST00000474956 POLR2AP24928 1970 aaKnown RBP13.52□□□□□ -0.24
RNF220-211ENST00000474956 WDR46O15213 610 aaKnown RBP13.52□□□□□ -0.24
RNF220-211ENST00000474956 ZEB2O60315 1214 aa13.52□□□□□ -0.24
RNF220-211ENST00000474956 PDCLQ13371 301 aa13.52□□□□□ -0.24
RNF220-211ENST00000474956 TTC19Q6DKK2 380 aaPredicted RBP13.52□□□□□ -0.24
RNF220-211ENST00000474956 KAT5Q92993 513 aa13.52□□□□□ -0.24
RNF220-211ENST00000474956 KIAA1683Q9H0B3 1180 aa13.52□□□□□ -0.24
RNF220-211ENST00000474956 NUCKS1Q9H1E3 243 aaKnown RBP13.52□□□□□ -0.24
RNF220-211ENST00000474956 UBIAD1Q9Y5Z9 338 aa13.52□□□□□ -0.24
RNF220-211ENST00000474956 VWA5AO00534 786 aa13.52□□□□□ -0.25
RNF220-211ENST00000474956 SLC16A4O15374 487 aa13.52□□□□□ -0.25
RNF220-211ENST00000474956 PLA2G6O60733 806 aa13.52□□□□□ -0.25
RNF220-211ENST00000474956 IRX3P78415 501 aaPredicted RBP13.52□□□□□ -0.25
RNF220-211ENST00000474956 R3HDM1Q15032 1099 aaKnown RBP13.52□□□□□ -0.25
RNF220-211ENST00000474956 KDM7AQ6ZMT4 941 aa13.52□□□□□ -0.25
RNF220-211ENST00000474956 MREGQ8N565 214 aa13.52□□□□□ -0.25
RNF220-211ENST00000474956 CNKSR2Q8WXI2 1034 aa13.52□□□□□ -0.25
RNF220-211ENST00000474956 CEP89Q96ST8 783 aa13.52□□□□□ -0.25
RNF220-211ENST00000474956 GPR88Q9GZN0 384 aa13.52□□□□□ -0.25
RNF220-211ENST00000474956 TAS2R14Q9NYV8 317 aa13.52□□□□□ -0.25
RNF220-211ENST00000474956 BRCA2P51587 3418 aa13.52□□□□□ -0.25
RNF220-211ENST00000474956 KIAA1217Q5T5P2 1943 aa13.51□□□□□ -0.25
RNF220-211ENST00000474956 DDX3XO00571 662 aaKnown RBP eCLIP13.51□□□□□ -0.25
RNF220-211ENST00000474956 KRT14P02533 472 aa13.51□□□□□ -0.25
RNF220-211ENST00000474956 USP8P40818 1118 aa13.51□□□□□ -0.25
RNF220-211ENST00000474956 FMO5P49326 533 aa13.51□□□□□ -0.25
RNF220-211ENST00000474956 ZNF280AP59817 542 aaPredicted RBP13.51□□□□□ -0.25
RNF220-211ENST00000474956 SETQ01105 290 aaPredicted RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms