RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 KIAA0391O15091 583 aaKnown RBP23.74■■□□□ 1.39
CCM2-206ENST00000474617 ERCC3P19447 782 aa23.74■■□□□ 1.39
CCM2-206ENST00000474617 CYP2J2P51589 502 aa23.74■■□□□ 1.39
CCM2-206ENST00000474617 TRAPPC11Q7Z392 1133 aa23.74■■□□□ 1.39
CCM2-206ENST00000474617 OTUD5Q96G74 571 aa23.74■■□□□ 1.39
CCM2-206ENST00000474617 ASCC2Q9H1I8 757 aaPredicted RBP23.74■■□□□ 1.39
CCM2-206ENST00000474617 PDLIM7Q9NR12 457 aa23.74■■□□□ 1.39
CCM2-206ENST00000474617 BTBD7Q9P203 1132 aa23.74■■□□□ 1.39
CCM2-206ENST00000474617 USP20Q9Y2K6 914 aa23.74■■□□□ 1.39
CCM2-206ENST00000474617 A0A0U1RQJ8 604 aa23.74■■□□□ 1.39
CCM2-206ENST00000474617 ZNF263O14978 683 aa23.74■■□□□ 1.39
CCM2-206ENST00000474617 TLR2O60603 784 aa23.74■■□□□ 1.39
CCM2-206ENST00000474617 STBD1O95210 358 aa23.74■■□□□ 1.39
CCM2-206ENST00000474617 YBX3P16989 372 aaKnown RBP eCLIP23.74■■□□□ 1.392e-6■■□□□ 12.1
CCM2-206ENST00000474617 STAT1P42224 750 aa23.74■■□□□ 1.39
CCM2-206ENST00000474617 PEX3P56589 373 aa23.74■■□□□ 1.39
CCM2-206ENST00000474617 JAM2P57087 298 aa23.74■■□□□ 1.39
CCM2-206ENST00000474617 CHMP4BP1P59074 171 aa23.74■■□□□ 1.39
CCM2-206ENST00000474617 ERCC6LQ2NKX8 1250 aa23.74■■□□□ 1.39
CCM2-206ENST00000474617 UTP14CQ5TAP6 766 aaKnown RBP23.74■■□□□ 1.39
CCM2-206ENST00000474617 IQCEQ6IPM2 695 aa23.74■■□□□ 1.39
CCM2-206ENST00000474617 SWSAP1Q6NVH7 229 aa23.74■■□□□ 1.39
CCM2-206ENST00000474617 EXOC8Q8IYI6 725 aa23.74■■□□□ 1.39
CCM2-206ENST00000474617 FAM133AQ8N9E0 248 aa23.74■■□□□ 1.39
CCM2-206ENST00000474617 TMEM161BQ8NDZ6 487 aa23.74■■□□□ 1.39
CCM2-206ENST00000474617 ATRIPQ8WXE1 791 aa23.74■■□□□ 1.39
CCM2-206ENST00000474617 STK33Q9BYT3 514 aa23.74■■□□□ 1.39
CCM2-206ENST00000474617 MROH8Q9H579 483 aa23.74■■□□□ 1.39
CCM2-206ENST00000474617 CYP26B1Q9NR63 512 aa23.74■■□□□ 1.39
CCM2-206ENST00000474617 TBX20Q9UMR3 447 aa23.74■■□□□ 1.39
CCM2-206ENST00000474617 MAFBQ9Y5Q3 323 aaPredicted RBP23.74■■□□□ 1.39
CCM2-206ENST00000474617 SAR1BQ9Y6B6 198 aa23.74■■□□□ 1.39
CCM2-206ENST00000474617 LCTP09848 1927 aa23.73■■□□□ 1.39
CCM2-206ENST00000474617 PLEKP08567 350 aaPredicted RBP23.73■■□□□ 1.39
CCM2-206ENST00000474617 SLC9A1P19634 815 aa23.73■■□□□ 1.39
CCM2-206ENST00000474617 PRKCEQ02156 737 aa23.73■■□□□ 1.39
CCM2-206ENST00000474617 SHCBP1Q8NEM2 672 aa23.73■■□□□ 1.39
CCM2-206ENST00000474617 NOX5Q96PH1 765 aa23.73■■□□□ 1.39
CCM2-206ENST00000474617 LACRTQ9GZZ8 138 aa23.73■■□□□ 1.39
CCM2-206ENST00000474617 KMT5AQ9NQR1 393 aa23.73■■□□□ 1.39
CCM2-206ENST00000474617 PNMA3Q9UL41 463 aa23.73■■□□□ 1.39
CCM2-206ENST00000474617 ARID2Q68CP9 1835 aa23.72■■□□□ 1.39
CCM2-206ENST00000474617 IGKV6D-21A0A0A0MT36 114 aa23.72■■□□□ 1.39
CCM2-206ENST00000474617 CTAGE15A4D2H0 777 aa23.72■■□□□ 1.39
CCM2-206ENST00000474617 ZNF862O60290 1169 aa23.72■■□□□ 1.39
CCM2-206ENST00000474617 CTAGE8P0CG41 777 aa23.72■■□□□ 1.39
CCM2-206ENST00000474617 H2AFXP16104 143 aaPredicted RBP23.72■■□□□ 1.39
CCM2-206ENST00000474617 RFC5P40937 340 aa23.72■■□□□ 1.39
CCM2-206ENST00000474617 NPTX2P47972 431 aa23.72■■□□□ 1.39
CCM2-206ENST00000474617 MYL7Q01449 175 aa23.72■■□□□ 1.39
CCM2-206ENST00000474617 CYP27A1Q02318 531 aa23.72■■□□□ 1.39
CCM2-206ENST00000474617 TTLL12Q14166 644 aaPredicted RBP23.72■■□□□ 1.39
CCM2-206ENST00000474617 IFI16Q16666 785 aaKnown RBP23.72■■□□□ 1.39
CCM2-206ENST00000474617 BRDTQ58F21 947 aaPredicted RBP23.72■■□□□ 1.39
CCM2-206ENST00000474617 FAM160B1Q5W0V3 765 aa23.72■■□□□ 1.39
CCM2-206ENST00000474617 CTAGE6Q86UF2 777 aa23.72■■□□□ 1.39
CCM2-206ENST00000474617 CTAGE4Q8IX94 777 aa23.72■■□□□ 1.39
CCM2-206ENST00000474617 BCAS3Q9H6U6 928 aa23.72■■□□□ 1.39
CCM2-206ENST00000474617 POLD4Q9HCU8 107 aa23.72■■□□□ 1.39
CCM2-206ENST00000474617 SIX2Q9NPC8 291 aa23.72■■□□□ 1.39
CCM2-206ENST00000474617 ZNF302Q9NR11 478 aa23.72■■□□□ 1.39
CCM2-206ENST00000474617 HSPBP1Q9NZL4 362 aa23.72■■□□□ 1.39
CCM2-206ENST00000474617 INTUQ9ULD6 942 aa23.72■■□□□ 1.39
CCM2-206ENST00000474617 WDR81Q562E7 1941 aa23.72■■□□□ 1.39
CCM2-206ENST00000474617 GLTPD2A6NH11 291 aa23.71■■□□□ 1.39
CCM2-206ENST00000474617 VAMP7P51809 220 aa23.71■■□□□ 1.39
CCM2-206ENST00000474617 PLA2G4FQ68DD2 849 aa23.71■■□□□ 1.39
CCM2-206ENST00000474617 ILDR2Q71H61 639 aa23.71■■□□□ 1.39
CCM2-206ENST00000474617 IRF2BP2Q7Z5L9 587 aa23.71■■□□□ 1.39
CCM2-206ENST00000474617 NCAPG2Q86XI2 1143 aa23.71■■□□□ 1.39
CCM2-206ENST00000474617 CCDC60Q8IWA6 550 aaPredicted RBP23.71■■□□□ 1.39
CCM2-206ENST00000474617 FAM167AQ96KS9 214 aa23.71■■□□□ 1.39
CCM2-206ENST00000474617 NIFKQ9BYG3 293 aaKnown RBP23.71■■□□□ 1.39
CCM2-206ENST00000474617 KIAA1586Q9HCI6 787 aa23.71■■□□□ 1.39
CCM2-206ENST00000474617 SLC45A1Q9Y2W3 748 aa23.71■■□□□ 1.39
CCM2-206ENST00000474617 GARTP22102 1010 aa23.7■■□□□ 1.38
CCM2-206ENST00000474617 GTF2H1P32780 548 aa23.7■■□□□ 1.38
CCM2-206ENST00000474617 NPEPPSP55786 919 aa23.7■■□□□ 1.38
CCM2-206ENST00000474617 SNAPC2Q13487 334 aa23.7■■□□□ 1.38
CCM2-206ENST00000474617 BMS1Q14692 1282 aaKnown RBP23.7■■□□□ 1.38
CCM2-206ENST00000474617 LDLRAD1Q5T700 205 aa23.7■■□□□ 1.38
CCM2-206ENST00000474617 MAEAQ7L5Y9 396 aa23.7■■□□□ 1.38
CCM2-206ENST00000474617 AFAP1L1Q8TED9 768 aa23.7■■□□□ 1.38
CCM2-206ENST00000474617 NRBP2Q9NSY0 501 aa23.7■■□□□ 1.38
CCM2-206ENST00000474617 APEX2Q9UBZ4 518 aa23.7■■□□□ 1.38
CCM2-206ENST00000474617 SEPT9Q9UHD8 586 aaPredicted RBP23.7■■□□□ 1.38
CCM2-206ENST00000474617 FHOD1Q9Y613 1164 aa23.7■■□□□ 1.38
CCM2-206ENST00000474617 CCDC169A6NNP5 214 aa23.69■■□□□ 1.38
CCM2-206ENST00000474617 SLC16A4O15374 487 aa23.69■■□□□ 1.38
CCM2-206ENST00000474617 OATP04181 439 aa23.69■■□□□ 1.38
CCM2-206ENST00000474617 CALR3Q96L12 384 aaKnown RBP23.69■■□□□ 1.38
CCM2-206ENST00000474617 FAM81BQ96LP2 452 aa23.69■■□□□ 1.38
CCM2-206ENST00000474617 CCDC94Q9BW85 323 aaPredicted RBP23.69■■□□□ 1.38
CCM2-206ENST00000474617 SYNGAP1Q96PV0 1343 aa23.69■■□□□ 1.38
CCM2-206ENST00000474617 RCCD1A6NED2 376 aa23.69■■□□□ 1.38
CCM2-206ENST00000474617 ATP8B1O43520 1251 aa23.69■■□□□ 1.38
CCM2-206ENST00000474617 GAS2O43903 313 aaKnown RBP23.69■■□□□ 1.38
CCM2-206ENST00000474617 ABL1P00519 1130 aa23.69■■□□□ 1.38
CCM2-206ENST00000474617 TCP1P17987 556 aaKnown RBP23.69■■□□□ 1.38
CCM2-206ENST00000474617 CNTN2Q02246 1040 aa23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms