RNA–Protein interactions for RNA: ENST00000474067.5

SNX13-206, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-206ENST00000474067 HSD17B14Q9BPX1 270 aa22.84■■□□□ 1.25
SNX13-206ENST00000474067 TRAIPQ9BWF2 469 aa22.84■■□□□ 1.25
SNX13-206ENST00000474067 PRDM6Q9NQX0 595 aa22.84■■□□□ 1.25
SNX13-206ENST00000474067 DAXXQ9UER7 740 aaPredicted RBP22.84■■□□□ 1.25
SNX13-206ENST00000474067 FAM50BQ9Y247 325 aa22.84■■□□□ 1.25
SNX13-206ENST00000474067 MRPL42Q9Y6G3 142 aaKnown RBP22.84■■□□□ 1.25
SNX13-206ENST00000474067 CHD9Q3L8U1 2897 aa22.83■■□□□ 1.25
SNX13-206ENST00000474067 PPM1AP35813 382 aa22.83■■□□□ 1.25
SNX13-206ENST00000474067 PHKA2P46019 1235 aa22.83■■□□□ 1.25
SNX13-206ENST00000474067 NPEPPSP55786 919 aa22.83■■□□□ 1.25
SNX13-206ENST00000474067 LRRC43Q8N309 656 aa22.83■■□□□ 1.25
SNX13-206ENST00000474067 SH2D3AQ9BRG2 576 aa22.83■■□□□ 1.25
SNX13-206ENST00000474067 TMEM150BA6NC51 233 aa22.82■■□□□ 1.24
SNX13-206ENST00000474067 U2AF2P26368 475 aaKnown RBP eCLIP22.82■■□□□ 1.24
SNX13-206ENST00000474067 POU5F1BQ06416 359 aa22.82■■□□□ 1.24
SNX13-206ENST00000474067 TWF2Q6IBS0 349 aaKnown RBP22.82■■□□□ 1.24
SNX13-206ENST00000474067 PDE12Q6L8Q7 609 aaKnown RBP22.82■■□□□ 1.24
SNX13-206ENST00000474067 ECHDC2Q86YB7 292 aa22.82■■□□□ 1.24
SNX13-206ENST00000474067 PGBD4Q96DM1 585 aa22.82■■□□□ 1.24
SNX13-206ENST00000474067 TBC1D32Q96NH3 1257 aa22.82■■□□□ 1.24
SNX13-206ENST00000474067 NACC1Q96RE7 527 aa22.82■■□□□ 1.24
SNX13-206ENST00000474067 PUF60Q9UHX1 559 aaKnown RBP22.82■■□□□ 1.24
SNX13-206ENST00000474067 PIN4Q9Y237 131 aaKnown RBP22.82■■□□□ 1.24
SNX13-206ENST00000474067 H3BQV1 296 aa22.81■■□□□ 1.24
SNX13-206ENST00000474067 ERLIN2O94905 339 aa22.81■■□□□ 1.24
SNX13-206ENST00000474067 AXLP30530 894 aa22.81■■□□□ 1.24
SNX13-206ENST00000474067 DRP2Q13474 957 aa22.81■■□□□ 1.24
SNX13-206ENST00000474067 BMS1Q14692 1282 aaKnown RBP22.81■■□□□ 1.24
SNX13-206ENST00000474067 MCPH1Q8NEM0 835 aa22.81■■□□□ 1.24
SNX13-206ENST00000474067 PRPF31Q8WWY3 499 aaKnown RBP22.81■■□□□ 1.24
SNX13-206ENST00000474067 TMX3Q96JJ7 454 aa22.81■■□□□ 1.24
SNX13-206ENST00000474067 POLR3CQ9BUI4 534 aaPredicted RBP22.81■■□□□ 1.24
SNX13-206ENST00000474067 UBE2ZQ9H832 354 aaPredicted RBP22.81■■□□□ 1.24
SNX13-206ENST00000474067 PLAGL2Q9UPG8 496 aa22.81■■□□□ 1.24
SNX13-206ENST00000474067 LINC00271P0C7V0 271 aa22.8■■□□□ 1.24
SNX13-206ENST00000474067 LAMTOR4Q0VGL1 99 aa22.8■■□□□ 1.24
SNX13-206ENST00000474067 RILPL1Q5EBL4 403 aa22.8■■□□□ 1.24
SNX13-206ENST00000474067 FERMT3Q86UX7 667 aa22.8■■□□□ 1.24
SNX13-206ENST00000474067 CNNM3Q8NE01 707 aa22.8■■□□□ 1.24
SNX13-206ENST00000474067 ADAMTS19Q8TE59 1207 aa22.8■■□□□ 1.24
SNX13-206ENST00000474067 ZNF668Q96K58 619 aaPredicted RBP22.8■■□□□ 1.24
SNX13-206ENST00000474067 WRAP73Q9P2S5 460 aaPredicted RBP22.8■■□□□ 1.24
SNX13-206ENST00000474067 POTEMA6NI47 508 aa22.79■■□□□ 1.24
SNX13-206ENST00000474067 SRGAP2CP0DJJ0 459 aa22.79■■□□□ 1.24
SNX13-206ENST00000474067 RPA1P27694 616 aa22.79■■□□□ 1.24
SNX13-206ENST00000474067 TECP42680 631 aa22.79■■□□□ 1.24
SNX13-206ENST00000474067 RARRES1P49788 294 aa22.79■■□□□ 1.24
SNX13-206ENST00000474067 ZNF174Q15697 407 aa22.79■■□□□ 1.24
SNX13-206ENST00000474067 THNSL1Q8IYQ7 743 aa22.79■■□□□ 1.24
SNX13-206ENST00000474067 RNF149Q8NC42 400 aa22.79■■□□□ 1.24
SNX13-206ENST00000474067 RNF169Q8NCN4 708 aa22.79■■□□□ 1.24
SNX13-206ENST00000474067 TMEM143Q96AN5 459 aa22.79■■□□□ 1.24
SNX13-206ENST00000474067 PABPC5Q96DU9 382 aaKnown RBP22.79■■□□□ 1.24
SNX13-206ENST00000474067 UHRF1Q96T88 793 aaPredicted RBP22.79■■□□□ 1.24
SNX13-206ENST00000474067 AGPAT5Q9NUQ2 364 aa22.79■■□□□ 1.24
SNX13-206ENST00000474067 DBR1Q9UK59 544 aaKnown RBP22.79■■□□□ 1.24
SNX13-206ENST00000474067 SMC3Q9UQE7 1217 aa22.79■■□□□ 1.24
SNX13-206ENST00000474067 FGFR1P11362 822 aa22.78■■□□□ 1.24
SNX13-206ENST00000474067 FXR2P51116 673 aaKnown RBP eCLIP22.78■■□□□ 1.24
SNX13-206ENST00000474067 KRT17Q04695 432 aa22.78■■□□□ 1.24
SNX13-206ENST00000474067 PDIA5Q14554 519 aa22.78■■□□□ 1.24
SNX13-206ENST00000474067 FAM102BQ5T8I3 360 aa22.78■■□□□ 1.24
SNX13-206ENST00000474067 MCTP1Q6DN14 999 aa22.78■■□□□ 1.24
SNX13-206ENST00000474067 GLB1LQ6UWU2 654 aa22.78■■□□□ 1.24
SNX13-206ENST00000474067 HACE1Q8IYU2 909 aa22.78■■□□□ 1.24
SNX13-206ENST00000474067 KLHL23Q8NBE8 558 aa22.78■■□□□ 1.24
SNX13-206ENST00000474067 CCDC51Q96ER9 411 aa22.78■■□□□ 1.24
SNX13-206ENST00000474067 TMEM60Q9H2L4 133 aa22.78■■□□□ 1.24
SNX13-206ENST00000474067 IFT122Q9HBG6 1241 aa22.78■■□□□ 1.24
SNX13-206ENST00000474067 STK39Q9UEW8 545 aa22.78■■□□□ 1.24
SNX13-206ENST00000474067 LZTS1Q9Y250 596 aa22.78■■□□□ 1.24
SNX13-206ENST00000474067 CHD7Q9P2D1 2997 aa22.78■■□□□ 1.24
SNX13-206ENST00000474067 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP22.77■■□□□ 1.24
SNX13-206ENST00000474067 TNFRSF10AO00220 468 aa22.77■■□□□ 1.24
SNX13-206ENST00000474067 GRM6O15303 877 aa22.77■■□□□ 1.24
SNX13-206ENST00000474067 LEXMQ3ZCV2 418 aa22.77■■□□□ 1.24
SNX13-206ENST00000474067 TCEAL5Q5H9L2 206 aa22.77■■□□□ 1.24
SNX13-206ENST00000474067 POF1BQ8WVV4 589 aa22.77■■□□□ 1.24
SNX13-206ENST00000474067 ZNF558Q96NG5 402 aa22.77■■□□□ 1.24
SNX13-206ENST00000474067 NFKBIZQ9BYH8 718 aa22.77■■□□□ 1.24
SNX13-206ENST00000474067 ALG13Q9NP73 1137 aaKnown RBP22.77■■□□□ 1.24
SNX13-206ENST00000474067 UBN1Q9NPG3 1134 aa22.77■■□□□ 1.24
SNX13-206ENST00000474067 FAM105AQ9NUU6 356 aa22.77■■□□□ 1.24
SNX13-206ENST00000474067 TYW1Q9NV66 732 aaKnown RBP22.77■■□□□ 1.24
SNX13-206ENST00000474067 ARID2Q68CP9 1835 aa22.77■■□□□ 1.24
SNX13-206ENST00000474067 FNDC1Q4ZHG4 1894 aaPredicted RBP22.77■■□□□ 1.24
SNX13-206ENST00000474067 ZNF623O75123 536 aa22.76■■□□□ 1.23
SNX13-206ENST00000474067 ITGB1P05556 798 aa22.76■■□□□ 1.23
SNX13-206ENST00000474067 SRGAP2BP0DMP2 458 aa22.76■■□□□ 1.23
SNX13-206ENST00000474067 FGFR4P22455 802 aa22.76■■□□□ 1.23
SNX13-206ENST00000474067 PRPHP41219 470 aa22.76■■□□□ 1.23
SNX13-206ENST00000474067 TFF2Q03403 129 aa22.76■■□□□ 1.23
SNX13-206ENST00000474067 CATSPER3Q86XQ3 398 aa22.76■■□□□ 1.23
SNX13-206ENST00000474067 IFNLR1Q8IU57 520 aaPredicted RBP22.76■■□□□ 1.23
SNX13-206ENST00000474067 COLGALT1Q8NBJ5 622 aa22.76■■□□□ 1.23
SNX13-206ENST00000474067 SPPL3Q8TCT6 385 aa22.76■■□□□ 1.23
SNX13-206ENST00000474067 URGCPQ8TCY9 931 aa22.76■■□□□ 1.23
SNX13-206ENST00000474067 LRWD1Q9UFC0 647 aa22.76■■□□□ 1.23
SNX13-206ENST00000474067 CNTNAP2Q9UHC6 1331 aa22.76■■□□□ 1.23
SNX13-206ENST00000474067 ARHGEF35A5YM69 484 aa22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms