RNA–Protein interactions for RNA: ENST00000473778.5

C9orf3-214, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 2,396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-214ENST00000473778 ARP10275 920 aa11.89□□□□□ -0.51
C9orf3-214ENST00000473778 CTNNA1P35221 906 aaKnown RBP11.89□□□□□ -0.51
C9orf3-214ENST00000473778 STAT1P42224 750 aa11.89□□□□□ -0.51
C9orf3-214ENST00000473778 ZNF211Q13398 564 aaPredicted RBP11.89□□□□□ -0.51
C9orf3-214ENST00000473778 CUL1Q13616 776 aa11.89□□□□□ -0.51
C9orf3-214ENST00000473778 SLC27A3Q5K4L6 730 aa11.89□□□□□ -0.51
C9orf3-214ENST00000473778 UBAP2Q5T6F2 1119 aaKnown RBP11.89□□□□□ -0.51
C9orf3-214ENST00000473778 TMC3Q7Z5M5 1100 aa11.89□□□□□ -0.51
C9orf3-214ENST00000473778 COL23A1Q86Y22 540 aaPredicted RBP11.89□□□□□ -0.51
C9orf3-214ENST00000473778 DAW1Q8N136 415 aa11.89□□□□□ -0.51
C9orf3-214ENST00000473778 LMO3Q8TAP4 145 aa11.89□□□□□ -0.51
C9orf3-214ENST00000473778 MYCBPAPQ8TBZ2 947 aa11.89□□□□□ -0.51
C9orf3-214ENST00000473778 ALG3Q92685 438 aa11.89□□□□□ -0.51
C9orf3-214ENST00000473778 PRMT6Q96LA8 375 aaPredicted RBP11.89□□□□□ -0.51
C9orf3-214ENST00000473778 TRIM31Q9BZY9 425 aa11.89□□□□□ -0.51
C9orf3-214ENST00000473778 DPH5Q9H2P9 285 aa11.89□□□□□ -0.51
C9orf3-214ENST00000473778 PARVGQ9HBI0 331 aa11.89□□□□□ -0.51
C9orf3-214ENST00000473778 AGPAT3Q9NRZ7 376 aa11.89□□□□□ -0.51
C9orf3-214ENST00000473778 DMAC2Q9NW81 257 aa11.89□□□□□ -0.51
C9orf3-214ENST00000473778 ATP8B3O60423 1300 aa11.88□□□□□ -0.51
C9orf3-214ENST00000473778 AFF2P51816 1311 aa11.88□□□□□ -0.51
C9orf3-214ENST00000473778 HMGB1P1B2RPK0 211 aaPredicted RBP11.88□□□□□ -0.51
C9orf3-214ENST00000473778 FERP16591 822 aa11.88□□□□□ -0.51
C9orf3-214ENST00000473778 TMOD1P28289 359 aa11.88□□□□□ -0.51
C9orf3-214ENST00000473778 ZNF131P52739 623 aa11.88□□□□□ -0.51
C9orf3-214ENST00000473778 PPP2R5CQ13362 524 aa11.88□□□□□ -0.51
C9orf3-214ENST00000473778 ARHGAP44Q17R89 818 aa11.88□□□□□ -0.51
C9orf3-214ENST00000473778 FBXW10Q5XX13 1052 aa11.88□□□□□ -0.51
C9orf3-214ENST00000473778 EIF1ADQ8N9N8 165 aaKnown RBP11.88□□□□□ -0.51
C9orf3-214ENST00000473778 C1orf131Q8NDD1 294 aaKnown RBP11.88□□□□□ -0.51
C9orf3-214ENST00000473778 ZNF473Q8WTR7 871 aaKnown RBP11.88□□□□□ -0.51
C9orf3-214ENST00000473778 SLC20A1Q8WUM9 679 aa11.88□□□□□ -0.51
C9orf3-214ENST00000473778 SLC5A5Q92911 643 aa11.88□□□□□ -0.51
C9orf3-214ENST00000473778 STK33Q9BYT3 514 aa11.88□□□□□ -0.51
C9orf3-214ENST00000473778 NCANO14594 1321 aa11.88□□□□□ -0.51
C9orf3-214ENST00000473778 FOXN3O00409 490 aaPredicted RBP11.87□□□□□ -0.51
C9orf3-214ENST00000473778 BACH1O14867 736 aa11.87□□□□□ -0.51
C9orf3-214ENST00000473778 MAPK7Q13164 816 aa11.87□□□□□ -0.51
C9orf3-214ENST00000473778 PLS1Q14651 629 aa11.87□□□□□ -0.51
C9orf3-214ENST00000473778 IFI16Q16666 785 aaKnown RBP11.87□□□□□ -0.51
C9orf3-214ENST00000473778 STRIP1Q5VSL9 837 aa11.87□□□□□ -0.51
C9orf3-214ENST00000473778 CCDC174Q6PII3 467 aa11.87□□□□□ -0.51
C9orf3-214ENST00000473778 CDAN1Q8IWY9 1227 aa11.87□□□□□ -0.51
C9orf3-214ENST00000473778 ZDHHC14Q8IZN3 488 aa11.87□□□□□ -0.51
C9orf3-214ENST00000473778 CNPY4Q8N129 248 aa11.87□□□□□ -0.51
C9orf3-214ENST00000473778 UBLCP1Q8WVY7 318 aaPredicted RBP11.87□□□□□ -0.51
C9orf3-214ENST00000473778 RFFLQ8WZ73 363 aa11.87□□□□□ -0.51
C9orf3-214ENST00000473778 GLG1Q92896 1179 aa11.87□□□□□ -0.51
C9orf3-214ENST00000473778 CCT8L2Q96SF2 557 aa11.87□□□□□ -0.51
C9orf3-214ENST00000473778 INTS2Q9H0H0 1204 aaKnown RBP11.87□□□□□ -0.51
C9orf3-214ENST00000473778 UNC45AQ9H3U1 944 aa11.87□□□□□ -0.51
C9orf3-214ENST00000473778 CXorf56Q9H5V9 222 aa11.87□□□□□ -0.51
C9orf3-214ENST00000473778 INTUQ9ULD6 942 aa11.87□□□□□ -0.51
C9orf3-214ENST00000473778 BRWD3Q6RI45 1802 aa11.87□□□□□ -0.51
C9orf3-214ENST00000473778 ATRNL1Q5VV63 1379 aa11.87□□□□□ -0.51
C9orf3-214ENST00000473778 CCDC188H7C350 402 aa11.87□□□□□ -0.51
C9orf3-214ENST00000473778 ERLIN2O94905 339 aa11.87□□□□□ -0.51
C9orf3-214ENST00000473778 GAP43P17677 238 aa11.87□□□□□ -0.51
C9orf3-214ENST00000473778 MARCKSL1P49006 195 aa11.87□□□□□ -0.51
C9orf3-214ENST00000473778 NPEPPSP55786 919 aa11.87□□□□□ -0.51
C9orf3-214ENST00000473778 NFIL3Q16649 462 aa11.87□□□□□ -0.51
C9orf3-214ENST00000473778 KCNV1Q6PIU1 500 aa11.87□□□□□ -0.51
C9orf3-214ENST00000473778 VPS36Q86VN1 386 aa11.87□□□□□ -0.51
C9orf3-214ENST00000473778 NLRP14Q86W24 1093 aa11.87□□□□□ -0.51
C9orf3-214ENST00000473778 SUGP1Q8IWZ8 645 aaKnown RBP11.87□□□□□ -0.51
C9orf3-214ENST00000473778 FAM178BQ8IXR5 827 aa11.87□□□□□ -0.51
C9orf3-214ENST00000473778 AKT1S1Q96B36 256 aa11.87□□□□□ -0.51
C9orf3-214ENST00000473778 HOOK2Q96ED9 719 aa11.87□□□□□ -0.51
C9orf3-214ENST00000473778 CSRNP1Q96S65 589 aa11.87□□□□□ -0.51
C9orf3-214ENST00000473778 MRIQ9BWK5 157 aa11.87□□□□□ -0.51
C9orf3-214ENST00000473778 STRA6Q9BX79 667 aa11.87□□□□□ -0.51
C9orf3-214ENST00000473778 FAM107BQ9H098 131 aa11.87□□□□□ -0.51
C9orf3-214ENST00000473778 EPB41L4BQ9H329 900 aa11.87□□□□□ -0.51
C9orf3-214ENST00000473778 TUFT1Q9NNX1 390 aa11.87□□□□□ -0.51
C9orf3-214ENST00000473778 DONSONQ9NYP3 566 aa11.87□□□□□ -0.51
C9orf3-214ENST00000473778 TMOD4Q9NZQ9 345 aa11.87□□□□□ -0.51
C9orf3-214ENST00000473778 APEX2Q9UBZ4 518 aa11.87□□□□□ -0.51
C9orf3-214ENST00000473778 ZNFX1Q9P2E3 1918 aaKnown RBP11.87□□□□□ -0.51
C9orf3-214ENST00000473778 GCOM1H8Y6P7 765 aaPredicted RBP11.86□□□□□ -0.51
C9orf3-214ENST00000473778 MMP10P09238 476 aa11.86□□□□□ -0.51
C9orf3-214ENST00000473778 TMEM253P0C7T8 217 aa11.86□□□□□ -0.51
C9orf3-214ENST00000473778 MYZAPP0CAP1 466 aa11.86□□□□□ -0.51
C9orf3-214ENST00000473778 ANXA13P27216 316 aa11.86□□□□□ -0.51
C9orf3-214ENST00000473778 ALDH1B1P30837 517 aa11.86□□□□□ -0.51
C9orf3-214ENST00000473778 STAT2P52630 851 aa11.86□□□□□ -0.51
C9orf3-214ENST00000473778 SF3B2Q13435 895 aaKnown RBP11.86□□□□□ -0.51
C9orf3-214ENST00000473778 QPCTQ16769 361 aa11.86□□□□□ -0.51
C9orf3-214ENST00000473778 SPRED3Q2MJR0 410 aa11.86□□□□□ -0.51
C9orf3-214ENST00000473778 ODR4Q5SWX8 454 aa11.86□□□□□ -0.51
C9orf3-214ENST00000473778 MSL1Q68DK7 614 aa11.86□□□□□ -0.51
C9orf3-214ENST00000473778 B3GNT9Q6UX72 402 aa11.86□□□□□ -0.51
C9orf3-214ENST00000473778 LRIG3Q6UXM1 1119 aa11.86□□□□□ -0.51
C9orf3-214ENST00000473778 MAEAQ7L5Y9 396 aa11.86□□□□□ -0.51
C9orf3-214ENST00000473778 CPNE8Q86YQ8 564 aa11.86□□□□□ -0.51
C9orf3-214ENST00000473778 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.86□□□□□ -0.51
C9orf3-214ENST00000473778 SH2D3AQ9BRG2 576 aa11.86□□□□□ -0.51
C9orf3-214ENST00000473778 TXLNGYQ9BZA5 131 aa11.86□□□□□ -0.51
C9orf3-214ENST00000473778 ACP6Q9NPH0 428 aa11.86□□□□□ -0.51
C9orf3-214ENST00000473778 PPANQ9NQ55 473 aaKnown RBP11.86□□□□□ -0.51
C9orf3-214ENST00000473778 AMFRQ9UKV5 643 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms