RNA–Protein interactions for RNA: ENST00000473714.1

CALD1-216, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 230 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-216ENST00000473714 PPP2R5DQ14738 602 aa3.03□□□□□ -1.92
CALD1-216ENST00000473714 NR1I3Q14994 352 aa3.03□□□□□ -1.92
CALD1-216ENST00000473714 SMN1Q16637 294 aaKnown RBP3.03□□□□□ -1.92
CALD1-216ENST00000473714 PLEKHG6Q3KR16 790 aa3.03□□□□□ -1.92
CALD1-216ENST00000473714 TBC1D10BQ4KMP7 808 aaPredicted RBP3.03□□□□□ -1.92
CALD1-216ENST00000473714 FAM209AQ5JX71 171 aa3.03□□□□□ -1.92
CALD1-216ENST00000473714 NBPF12Q5TAG4 269 aaPredicted RBP3.03□□□□□ -1.92
CALD1-216ENST00000473714 ZC3H14Q6PJT7 736 aaKnown RBP3.03□□□□□ -1.92
CALD1-216ENST00000473714 GLB1LQ6UWU2 654 aa3.03□□□□□ -1.92
CALD1-216ENST00000473714 RPTNQ6XPR3 784 aa3.03□□□□□ -1.92
CALD1-216ENST00000473714 KRT26Q7Z3Y9 468 aa3.03□□□□□ -1.92
CALD1-216ENST00000473714 ZNF575Q86XF7 245 aa3.03□□□□□ -1.92
CALD1-216ENST00000473714 FMNL3Q8IVF7 1028 aa3.03□□□□□ -1.92
CALD1-216ENST00000473714 WDR75Q8IWA0 830 aaKnown RBP3.03□□□□□ -1.92
CALD1-216ENST00000473714 SLFN12Q8IYM2 578 aa3.03□□□□□ -1.92
CALD1-216ENST00000473714 AHI1Q8N157 1196 aa3.03□□□□□ -1.92
CALD1-216ENST00000473714 CARFQ8N187 725 aa3.03□□□□□ -1.92
CALD1-216ENST00000473714 USHBP1Q8N6Y0 703 aa3.03□□□□□ -1.92
CALD1-216ENST00000473714 C2orf69Q8N8R5 385 aa3.03□□□□□ -1.92
CALD1-216ENST00000473714 ADCY4Q8NFM4 1077 aa3.03□□□□□ -1.92
CALD1-216ENST00000473714 ENOX1Q8TC92 643 aaKnown RBP3.03□□□□□ -1.92
CALD1-216ENST00000473714 ZNF512BQ96KM6 892 aaPredicted RBP3.03□□□□□ -1.92
CALD1-216ENST00000473714 HAUS7Q99871 368 aa3.03□□□□□ -1.92
CALD1-216ENST00000473714 DSCC1Q9BVC3 393 aa3.03□□□□□ -1.92
CALD1-216ENST00000473714 FOXP3Q9BZS1 431 aa3.03□□□□□ -1.92
CALD1-216ENST00000473714 GBA2Q9HCG7 927 aaPredicted RBP3.03□□□□□ -1.92
CALD1-216ENST00000473714 POGKQ9P215 609 aa3.03□□□□□ -1.92
CALD1-216ENST00000473714 CHPF2Q9P2E5 772 aa3.03□□□□□ -1.92
CALD1-216ENST00000473714 TNFRSF10DQ9UBN6 386 aa3.03□□□□□ -1.92
CALD1-216ENST00000473714 NDOR1Q9UHB4 597 aa3.03□□□□□ -1.92
CALD1-216ENST00000473714 SFMBT1Q9UHJ3 866 aa3.03□□□□□ -1.92
CALD1-216ENST00000473714 MRPS23Q9Y3D9 190 aaKnown RBP3.03□□□□□ -1.92
CALD1-216ENST00000473714 EPG5Q9HCE0 2579 aa3.03□□□□□ -1.93
CALD1-216ENST00000473714 PIK3C2GO75747 1445 aa3.02□□□□□ -1.93
CALD1-216ENST00000473714 ARFGEF2Q9Y6D5 1785 aa3.02□□□□□ -1.93
CALD1-216ENST00000473714 NRXN2Q9P2S2 1712 aa3.02□□□□□ -1.93
CALD1-216ENST00000473714 ANKRD26Q9UPS8 1709 aa3.02□□□□□ -1.93
CALD1-216ENST00000473714 GPR179Q6PRD1 2367 aa3.02□□□□□ -1.93
CALD1-216ENST00000473714 TMEM82A0PJX8 343 aa3.02□□□□□ -1.93
CALD1-216ENST00000473714 PLD2O14939 933 aa3.02□□□□□ -1.93
CALD1-216ENST00000473714 OPA1O60313 960 aa3.02□□□□□ -1.93
CALD1-216ENST00000473714 DNAJA2O60884 412 aa3.02□□□□□ -1.93
CALD1-216ENST00000473714 KCNH1O95259 989 aa3.02□□□□□ -1.93
CALD1-216ENST00000473714 PARNO95453 639 aaKnown RBP3.02□□□□□ -1.93
CALD1-216ENST00000473714 PLA2G1BP04054 148 aaKnown RBP3.02□□□□□ -1.93
CALD1-216ENST00000473714 ITGAVP06756 1048 aa3.02□□□□□ -1.93
CALD1-216ENST00000473714 PABPC1P11940 636 aaKnown RBP3.02□□□□□ -1.93
CALD1-216ENST00000473714 FOSL2P15408 326 aa3.02□□□□□ -1.93
CALD1-216ENST00000473714 MAPKAPK2P49137 400 aa3.02□□□□□ -1.93
CALD1-216ENST00000473714 PPP2R2AP63151 447 aa3.02□□□□□ -1.93
CALD1-216ENST00000473714 SUMO1P63165 101 aaKnown RBP3.02□□□□□ -1.93
CALD1-216ENST00000473714 MRPS5P82675 430 aaKnown RBP3.02□□□□□ -1.93
CALD1-216ENST00000473714 STRN3Q13033 797 aa3.02□□□□□ -1.93
CALD1-216ENST00000473714 KLF10Q13118 480 aa3.02□□□□□ -1.93
CALD1-216ENST00000473714 ITPK1Q13572 414 aa3.02□□□□□ -1.93
CALD1-216ENST00000473714 NBPF9Q3BBW0 867 aa3.02□□□□□ -1.93
CALD1-216ENST00000473714 FNDC3BQ53EP0 1204 aaKnown RBP3.02□□□□□ -1.93
CALD1-216ENST00000473714 DCAF15Q66K64 600 aa3.02□□□□□ -1.93
CALD1-216ENST00000473714 UBE2R2Q712K3 238 aaPredicted RBP3.02□□□□□ -1.93
CALD1-216ENST00000473714 C2CD5Q86YS7 1000 aa3.02□□□□□ -1.93
CALD1-216ENST00000473714 LURAP1LQ8IV03 231 aa3.02□□□□□ -1.93
CALD1-216ENST00000473714 CCAR1Q8IX12 1150 aaKnown RBP3.02□□□□□ -1.93
CALD1-216ENST00000473714 TMEM192Q8IY95 271 aa3.02□□□□□ -1.93
CALD1-216ENST00000473714 KCNH5Q8NCM2 988 aa3.02□□□□□ -1.93
CALD1-216ENST00000473714 BVESQ8NE79 360 aa3.02□□□□□ -1.93
CALD1-216ENST00000473714 SYTL5Q8TDW5 730 aaPredicted RBP3.02□□□□□ -1.93
CALD1-216ENST00000473714 KLHL6Q8WZ60 621 aa3.02□□□□□ -1.93
CALD1-216ENST00000473714 ERO1AQ96HE7 468 aa3.02□□□□□ -1.93
CALD1-216ENST00000473714 KREMEN1Q96MU8 473 aa3.02□□□□□ -1.93
CALD1-216ENST00000473714 CDK5RAP1Q96SZ6 601 aaKnown RBP3.02□□□□□ -1.93
CALD1-216ENST00000473714 IER2Q9BTL4 223 aa3.02□□□□□ -1.93
CALD1-216ENST00000473714 PRDM14Q9GZV8 571 aa3.02□□□□□ -1.93
CALD1-216ENST00000473714 NCOA5Q9HCD5 579 aaKnown RBP3.02□□□□□ -1.93
CALD1-216ENST00000473714 ADARB2Q9NS39 739 aaKnown RBP3.02□□□□□ -1.93
CALD1-216ENST00000473714 TYW1Q9NV66 732 aaKnown RBP3.02□□□□□ -1.93
CALD1-216ENST00000473714 MAGEC2Q9UBF1 373 aaPredicted RBP3.02□□□□□ -1.93
CALD1-216ENST00000473714 ST6GALNAC2Q9UJ37 374 aa3.02□□□□□ -1.93
CALD1-216ENST00000473714 TCFL5Q9UL49 500 aa3.02□□□□□ -1.93
CALD1-216ENST00000473714 PCDHB12Q9Y5F1 795 aa3.02□□□□□ -1.93
CALD1-216ENST00000473714 FASNP49327 2511 aaKnown RBP3.02□□□□□ -1.93
CALD1-216ENST00000473714 CFAP54Q96N23 3096 aa3.02□□□□□ -1.93
CALD1-216ENST00000473714 COL2A1P02458 1487 aaPredicted RBP3.02□□□□□ -1.93
CALD1-216ENST00000473714 COL5A3P25940 1745 aaPredicted RBP3.02□□□□□ -1.93
CALD1-216ENST00000473714 ZNF536O15090 1300 aa3.01□□□□□ -1.93
CALD1-216ENST00000473714 FADS2P1A8MWK0 482 aa3.01□□□□□ -1.93
CALD1-216ENST00000473714 ADCY3O60266 1144 aa3.01□□□□□ -1.93
CALD1-216ENST00000473714 RPS6KA4O75676 772 aa3.01□□□□□ -1.93
CALD1-216ENST00000473714 SNRPB2P08579 225 aaKnown RBP3.01□□□□□ -1.93
CALD1-216ENST00000473714 CD247P20963 164 aa3.01□□□□□ -1.93
CALD1-216ENST00000473714 STAT3P40763 770 aa3.01□□□□□ -1.93
CALD1-216ENST00000473714 ECI1P42126 302 aa3.01□□□□□ -1.93
CALD1-216ENST00000473714 SARSP49591 514 aaKnown RBP3.01□□□□□ -1.93
CALD1-216ENST00000473714 GUCY2FP51841 1108 aa3.01□□□□□ -1.93
CALD1-216ENST00000473714 INHBEP58166 350 aa3.01□□□□□ -1.93
CALD1-216ENST00000473714 EXOSC10Q01780 885 aaKnown RBP3.01□□□□□ -1.93
CALD1-216ENST00000473714 ITKQ08881 620 aa3.01□□□□□ -1.93
CALD1-216ENST00000473714 NMIQ13287 307 aaPredicted RBP3.01□□□□□ -1.93
CALD1-216ENST00000473714 AUHQ13825 339 aaKnown RBP3.01□□□□□ -1.93
CALD1-216ENST00000473714 PLEKHN1Q494U1 663 aaPredicted RBP3.01□□□□□ -1.93
CALD1-216ENST00000473714 HSF5Q4G112 596 aaPredicted RBP3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms