RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 OR2W6PQ8NHA6 318 aa6.61□□□□□ -1.35
HERC4-209ENST00000473533 CFAP61Q8NHU2 1237 aa6.61□□□□□ -1.35
HERC4-209ENST00000473533 FBF1Q8TES7 1133 aa6.61□□□□□ -1.35
HERC4-209ENST00000473533 NUDT12Q9BQG2 462 aa6.61□□□□□ -1.35
HERC4-209ENST00000473533 NOD2Q9HC29 1040 aa6.61□□□□□ -1.35
HERC4-209ENST00000473533 CD209Q9NNX6 404 aa6.61□□□□□ -1.35
HERC4-209ENST00000473533 APEX2Q9UBZ4 518 aa6.61□□□□□ -1.35
HERC4-209ENST00000473533 SERPINB13Q9UIV8 391 aa6.61□□□□□ -1.35
HERC4-209ENST00000473533 DNAJC12Q9UKB3 198 aa6.61□□□□□ -1.35
HERC4-209ENST00000473533 USP15Q9Y4E8 981 aaPredicted RBP6.61□□□□□ -1.35
HERC4-209ENST00000473533 AFF2P51816 1311 aa6.6□□□□□ -1.35
HERC4-209ENST00000473533 DDX3YO15523 660 aaKnown RBP6.6□□□□□ -1.35
HERC4-209ENST00000473533 WFS1O76024 890 aa6.6□□□□□ -1.35
HERC4-209ENST00000473533 MTA2O94776 668 aa6.6□□□□□ -1.35
HERC4-209ENST00000473533 ZBTB48P10074 688 aaPredicted RBP6.6□□□□□ -1.35
HERC4-209ENST00000473533 FMO5P49326 533 aa6.6□□□□□ -1.35
HERC4-209ENST00000473533 GPC5P78333 572 aa6.6□□□□□ -1.35
HERC4-209ENST00000473533 MYL7Q01449 175 aa6.6□□□□□ -1.35
HERC4-209ENST00000473533 EVX2Q03828 476 aa6.6□□□□□ -1.35
HERC4-209ENST00000473533 ARHGEF18Q6ZSZ5 1173 aa6.6□□□□□ -1.35
HERC4-209ENST00000473533 DDX42Q86XP3 938 aaKnown RBP eCLIP6.6□□□□□ -1.35
HERC4-209ENST00000473533 RIBC1Q8N443 379 aaPredicted RBP6.6□□□□□ -1.35
HERC4-209ENST00000473533 ZNF317Q96PQ6 595 aaPredicted RBP6.6□□□□□ -1.35
HERC4-209ENST00000473533 REEP2Q9BRK0 252 aa6.6□□□□□ -1.35
HERC4-209ENST00000473533 AMNQ9BXJ7 453 aa6.6□□□□□ -1.35
HERC4-209ENST00000473533 PPCSQ9HAB8 311 aa6.6□□□□□ -1.35
HERC4-209ENST00000473533 ZDHHC18Q9NUE0 388 aa6.6□□□□□ -1.35
HERC4-209ENST00000473533 WHRNQ9P202 907 aa6.6□□□□□ -1.35
HERC4-209ENST00000473533 BAIAP2L1Q9UHR4 511 aa6.6□□□□□ -1.35
HERC4-209ENST00000473533 PNMA2Q9UL42 364 aa6.6□□□□□ -1.35
HERC4-209ENST00000473533 ARL2BPQ9Y2Y0 163 aa6.6□□□□□ -1.35
HERC4-209ENST00000473533 RTCBQ9Y3I0 505 aaKnown RBP6.6□□□□□ -1.35
HERC4-209ENST00000473533 DNM1LO00429 736 aa6.6□□□□□ -1.35
HERC4-209ENST00000473533 CAND2O75155 1236 aa6.6□□□□□ -1.35
HERC4-209ENST00000473533 GZMAP12544 262 aa6.6□□□□□ -1.35
HERC4-209ENST00000473533 ACTN1P12814 892 aa6.6□□□□□ -1.35
HERC4-209ENST00000473533 ZNF76P36508 570 aa6.6□□□□□ -1.35
HERC4-209ENST00000473533 PLTPP55058 493 aa6.6□□□□□ -1.35
HERC4-209ENST00000473533 DRAP1Q14919 205 aaPredicted RBP6.6□□□□□ -1.35
HERC4-209ENST00000473533 UBE2SQ16763 222 aa6.6□□□□□ -1.35
HERC4-209ENST00000473533 PPP1R2P3Q6NXS1 205 aa6.6□□□□□ -1.35
HERC4-209ENST00000473533 DPP8Q6V1X1 898 aaPredicted RBP6.6□□□□□ -1.35
HERC4-209ENST00000473533 USP37Q86T82 979 aa6.6□□□□□ -1.35
HERC4-209ENST00000473533 SLC9A9Q8IVB4 645 aa6.6□□□□□ -1.35
HERC4-209ENST00000473533 MAB21L3Q8N8X9 362 aa6.6□□□□□ -1.35
HERC4-209ENST00000473533 MIEF2Q96C03 454 aa6.6□□□□□ -1.35
HERC4-209ENST00000473533 ACSBG1Q96GR2 724 aa6.6□□□□□ -1.35
HERC4-209ENST00000473533 RBM17Q96I25 401 aaKnown RBP6.6□□□□□ -1.35
HERC4-209ENST00000473533 IWS1Q96ST2 819 aa6.6□□□□□ -1.35
HERC4-209ENST00000473533 NEUROG2Q9H2A3 272 aa6.6□□□□□ -1.35
HERC4-209ENST00000473533 PARVGQ9HBI0 331 aa6.6□□□□□ -1.35
HERC4-209ENST00000473533 SIX2Q9NPC8 291 aa6.6□□□□□ -1.35
HERC4-209ENST00000473533 TXLNGQ9NUQ3 528 aa6.6□□□□□ -1.35
HERC4-209ENST00000473533 NKIRAS1Q9NYS0 192 aa6.6□□□□□ -1.35
HERC4-209ENST00000473533 CTTNBP2NLQ9P2B4 639 aa6.6□□□□□ -1.35
HERC4-209ENST00000473533 ACTL7BQ9Y614 415 aa6.6□□□□□ -1.35
HERC4-209ENST00000473533 TLDC2A0PJX2 215 aa6.59□□□□□ -1.35
HERC4-209ENST00000473533 PHF20L1A8MW92 1017 aa6.59□□□□□ -1.35
HERC4-209ENST00000473533 E7ENQ6 273 aa6.59□□□□□ -1.35
HERC4-209ENST00000473533 KIAA0391O15091 583 aaKnown RBP6.59□□□□□ -1.35
HERC4-209ENST00000473533 HNRNPCL1O60812 293 aaKnown RBP6.59□□□□□ -1.35
HERC4-209ENST00000473533 RTN2O75298 545 aa6.59□□□□□ -1.35
HERC4-209ENST00000473533 AKAP3O75969 853 aa6.59□□□□□ -1.35
HERC4-209ENST00000473533 ECEL1O95672 775 aa6.59□□□□□ -1.35
HERC4-209ENST00000473533 GAS8O95995 478 aa6.59□□□□□ -1.35
HERC4-209ENST00000473533 ITIH2P19823 946 aa6.59□□□□□ -1.35
HERC4-209ENST00000473533 CTNNA2P26232 953 aa6.59□□□□□ -1.35
HERC4-209ENST00000473533 CIITAP33076 1130 aa6.59□□□□□ -1.35
HERC4-209ENST00000473533 CETN2P41208 172 aa6.59□□□□□ -1.35
HERC4-209ENST00000473533 RASSF2P50749 326 aa6.59□□□□□ -1.35
HERC4-209ENST00000473533 ARHGAP4P98171 946 aa6.59□□□□□ -1.35
HERC4-209ENST00000473533 GABPAQ06546 454 aa6.59□□□□□ -1.35
HERC4-209ENST00000473533 KLRC3Q07444 240 aa6.59□□□□□ -1.35
HERC4-209ENST00000473533 CCDC15Q0P6D6 951 aa6.59□□□□□ -1.35
HERC4-209ENST00000473533 ZNF268Q14587 947 aaPredicted RBP6.59□□□□□ -1.35
HERC4-209ENST00000473533 ZRSR2Q15696 482 aaKnown RBP6.59□□□□□ -1.35
HERC4-209ENST00000473533 CYP1B1Q16678 543 aa6.59□□□□□ -1.35
HERC4-209ENST00000473533 MFSD14BQ5SR56 506 aa6.59□□□□□ -1.35
HERC4-209ENST00000473533 INTS8Q75QN2 995 aaKnown RBP6.59□□□□□ -1.35
HERC4-209ENST00000473533 LRRC47Q8N1G4 583 aaKnown RBP6.59□□□□□ -1.35
HERC4-209ENST00000473533 C12orf50Q8NA57 414 aaPredicted RBP6.59□□□□□ -1.35
HERC4-209ENST00000473533 SLCO2A1Q92959 643 aa6.59□□□□□ -1.35
HERC4-209ENST00000473533 AGPAT1Q99943 283 aa6.59□□□□□ -1.35
HERC4-209ENST00000473533 INTS2Q9H0H0 1204 aaKnown RBP6.59□□□□□ -1.35
HERC4-209ENST00000473533 CPVLQ9H3G5 476 aa6.59□□□□□ -1.35
HERC4-209ENST00000473533 TMEM206Q9H813 350 aa6.59□□□□□ -1.35
HERC4-209ENST00000473533 SEPT11Q9NVA2 429 aaKnown RBP6.59□□□□□ -1.35
HERC4-209ENST00000473533 KLHL14Q9P2G3 628 aa6.59□□□□□ -1.35
HERC4-209ENST00000473533 UVRAGQ9P2Y5 699 aa6.59□□□□□ -1.35
HERC4-209ENST00000473533 CNOT8Q9UFF9 292 aaKnown RBP6.59□□□□□ -1.35
HERC4-209ENST00000473533 SYNPO2Q9UMS6 1093 aa6.59□□□□□ -1.35
HERC4-209ENST00000473533 PCDHA1Q9Y5I3 950 aa6.59□□□□□ -1.35
HERC4-209ENST00000473533 FOCADQ5VW36 1801 aa6.59□□□□□ -1.35
HERC4-209ENST00000473533 ASTN1O14525 1302 aa6.59□□□□□ -1.35
HERC4-209ENST00000473533 NKRFO15226 690 aaKnown RBP eCLIP6.59□□□□□ -1.35
HERC4-209ENST00000473533 MAPK13O15264 365 aa6.59□□□□□ -1.35
HERC4-209ENST00000473533 MED24O75448 989 aa6.59□□□□□ -1.35
HERC4-209ENST00000473533 BBOX1O75936 387 aa6.59□□□□□ -1.35
HERC4-209ENST00000473533 UFL1O94874 794 aa6.59□□□□□ -1.35
HERC4-209ENST00000473533 MAPTP10636 758 aaKnown RBP6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms