RNA–Protein interactions for RNA: ENST00000473376.1

CHD3-209, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-209ENST00000473376 RAB27AP51159 221 aa15.21■□□□□ 0.03
CHD3-209ENST00000473376 CLUL1Q15846 466 aa15.21■□□□□ 0.03
CHD3-209ENST00000473376 RBM23Q86U06 439 aaKnown RBP15.21■□□□□ 0.03
CHD3-209ENST00000473376 SLC39A11Q8N1S5 342 aa15.21■□□□□ 0.03
CHD3-209ENST00000473376 MRPL43Q8N983 215 aaKnown RBP15.21■□□□□ 0.03
CHD3-209ENST00000473376 TCF25Q9BQ70 676 aa15.21■□□□□ 0.03
CHD3-209ENST00000473376 PHF20Q9BVI0 1012 aa15.21■□□□□ 0.03
CHD3-209ENST00000473376 S1PR5Q9H228 398 aa15.21■□□□□ 0.03
CHD3-209ENST00000473376 KCNMB3Q9NPA1 279 aa15.21■□□□□ 0.03
CHD3-209ENST00000473376 DDX25Q9UHL0 483 aaKnown RBP15.21■□□□□ 0.03
CHD3-209ENST00000473376 BARX2Q9UMQ3 279 aaPredicted RBP15.21■□□□□ 0.03
CHD3-209ENST00000473376 IRAK3Q9Y616 596 aa15.21■□□□□ 0.03
CHD3-209ENST00000473376 KIAA1671Q9BY89 1806 aa15.21■□□□□ 0.03
CHD3-209ENST00000473376 PIEZO1Q92508 2521 aa15.2■□□□□ 0.02
CHD3-209ENST00000473376 CHMP2AO43633 222 aa15.2■□□□□ 0.02
CHD3-209ENST00000473376 EIF5BO60841 1220 aaKnown RBP15.2■□□□□ 0.02
CHD3-209ENST00000473376 TDP2O95551 362 aa15.2■□□□□ 0.02
CHD3-209ENST00000473376 PHKA2P46019 1235 aa15.2■□□□□ 0.02
CHD3-209ENST00000473376 QARSP47897 775 aaKnown RBP15.2■□□□□ 0.02
CHD3-209ENST00000473376 POLGP54098 1239 aaPredicted RBP15.2■□□□□ 0.02
CHD3-209ENST00000473376 ANAPC15P60006 121 aa15.2■□□□□ 0.02
CHD3-209ENST00000473376 ITIH3Q06033 890 aa15.2■□□□□ 0.02
CHD3-209ENST00000473376 CLLU1OSQ5K130 101 aa15.2■□□□□ 0.02
CHD3-209ENST00000473376 ANKRD54Q6NXT1 300 aa15.2■□□□□ 0.02
CHD3-209ENST00000473376 TRMT1LQ7Z2T5 733 aaKnown RBP15.2■□□□□ 0.02
CHD3-209ENST00000473376 SCLT1Q96NL6 688 aa15.2■□□□□ 0.02
CHD3-209ENST00000473376 NECTIN4Q96NY8 510 aa15.2■□□□□ 0.02
CHD3-209ENST00000473376 UIMC1Q96RL1 719 aa15.2■□□□□ 0.02
CHD3-209ENST00000473376 PPP1R16BQ96T49 567 aa15.2■□□□□ 0.02
CHD3-209ENST00000473376 PDRG1Q9NUG6 133 aa15.2■□□□□ 0.02
CHD3-209ENST00000473376 DAXXQ9UER7 740 aaPredicted RBP15.2■□□□□ 0.02
CHD3-209ENST00000473376 SEPT9Q9UHD8 586 aaPredicted RBP15.2■□□□□ 0.02
CHD3-209ENST00000473376 MUTYHQ9UIF7 546 aa15.2■□□□□ 0.02
CHD3-209ENST00000473376 ASAP2O43150 1006 aa15.19■□□□□ 0.02
CHD3-209ENST00000473376 P4HBP07237 508 aaKnown RBP15.19■□□□□ 0.02
CHD3-209ENST00000473376 RFC5P40937 340 aa15.19■□□□□ 0.02
CHD3-209ENST00000473376 SMC1AQ14683 1233 aaKnown RBP15.19■□□□□ 0.02
CHD3-209ENST00000473376 ANKRD1Q15327 319 aa15.19■□□□□ 0.02
CHD3-209ENST00000473376 TPRNQ4KMQ1 711 aa15.19■□□□□ 0.02
CHD3-209ENST00000473376 ANO5Q75V66 913 aa15.19■□□□□ 0.02
CHD3-209ENST00000473376 NEK8Q86SG6 692 aa15.19■□□□□ 0.02
CHD3-209ENST00000473376 C4orf19Q8IY42 314 aa15.19■□□□□ 0.02
CHD3-209ENST00000473376 VN1R2Q8NFZ6 395 aa15.19■□□□□ 0.02
CHD3-209ENST00000473376 SLC7A3Q8WY07 619 aa15.19■□□□□ 0.02
CHD3-209ENST00000473376 WASF1Q92558 559 aa15.19■□□□□ 0.02
CHD3-209ENST00000473376 CASP10Q92851 521 aa15.19■□□□□ 0.02
CHD3-209ENST00000473376 ENTPD7Q9NQZ7 604 aa15.19■□□□□ 0.02
CHD3-209ENST00000473376 CYP26B1Q9NR63 512 aa15.19■□□□□ 0.02
CHD3-209ENST00000473376 SUCLA2Q9P2R7 463 aaPredicted RBP15.19■□□□□ 0.02
CHD3-209ENST00000473376 CCDC194A0A1B0GVG4 234 aa15.18■□□□□ 0.02
CHD3-209ENST00000473376 PER2O15055 1255 aa15.18■□□□□ 0.02
CHD3-209ENST00000473376 ZXDAP98168 799 aa15.18■□□□□ 0.02
CHD3-209ENST00000473376 POU5F1BQ06416 359 aa15.18■□□□□ 0.02
CHD3-209ENST00000473376 MTERF2Q49AM1 385 aa15.18■□□□□ 0.02
CHD3-209ENST00000473376 TRIM67Q6ZTA4 783 aa15.18■□□□□ 0.02
CHD3-209ENST00000473376 HFE2Q6ZVN8 426 aa15.18■□□□□ 0.02
CHD3-209ENST00000473376 TMC7Q7Z402 723 aa15.18■□□□□ 0.02
CHD3-209ENST00000473376 SRGAP1Q7Z6B7 1085 aa15.18■□□□□ 0.02
CHD3-209ENST00000473376 SLFN12Q8IYM2 578 aa15.18■□□□□ 0.02
CHD3-209ENST00000473376 PGBD4Q96DM1 585 aa15.18■□□□□ 0.02
CHD3-209ENST00000473376 DHX33Q9H6R0 707 aaKnown RBP15.18■□□□□ 0.02
CHD3-209ENST00000473376 KANSL3Q9P2N6 904 aa15.18■□□□□ 0.02
CHD3-209ENST00000473376 VAV3Q9UKW4 847 aa15.18■□□□□ 0.02
CHD3-209ENST00000473376 MUC6Q6W4X9 2439 aa15.18■□□□□ 0.02
CHD3-209ENST00000473376 PLXNA4Q9HCM2 1894 aa15.18■□□□□ 0.02
CHD3-209ENST00000473376 A0A087WZ62 844 aa15.17■□□□□ 0.02
CHD3-209ENST00000473376 C2orf71A6NGG8 1288 aa15.17■□□□□ 0.02
CHD3-209ENST00000473376 DDX11L8A8MPP1 907 aa15.17■□□□□ 0.02
CHD3-209ENST00000473376 PFKFB2O60825 505 aa15.17■□□□□ 0.02
CHD3-209ENST00000473376 NUBP1P53384 320 aa15.17■□□□□ 0.02
CHD3-209ENST00000473376 BCAR1P56945 870 aa15.17■□□□□ 0.02
CHD3-209ENST00000473376 DRP2Q13474 957 aa15.17■□□□□ 0.02
CHD3-209ENST00000473376 EPHA7Q15375 998 aa15.17■□□□□ 0.02
CHD3-209ENST00000473376 INF2Q27J81 1249 aa15.17■□□□□ 0.02
CHD3-209ENST00000473376 SYCE2Q6PIF2 218 aa15.17■□□□□ 0.02
CHD3-209ENST00000473376 GLB1LQ6UWU2 654 aa15.17■□□□□ 0.02
CHD3-209ENST00000473376 OTUD6AQ7L8S5 288 aa15.17■□□□□ 0.02
CHD3-209ENST00000473376 MRPL10Q7Z7H8 261 aaKnown RBP15.17■□□□□ 0.02
CHD3-209ENST00000473376 DDX53Q86TM3 631 aaKnown RBP15.17■□□□□ 0.02
CHD3-209ENST00000473376 CNNM3Q8NE01 707 aa15.17■□□□□ 0.02
CHD3-209ENST00000473376 TCP11Q8WWU5 503 aa15.17■□□□□ 0.02
CHD3-209ENST00000473376 TMEM169Q96HH4 297 aa15.17■□□□□ 0.02
CHD3-209ENST00000473376 FDXACB1Q9BRP7 624 aaPredicted RBP15.17■□□□□ 0.02
CHD3-209ENST00000473376 SLKQ9H2G2 1235 aaPredicted RBP15.17■□□□□ 0.02
CHD3-209ENST00000473376 ADAM7Q9H2U9 754 aa15.17■□□□□ 0.02
CHD3-209ENST00000473376 IFT122Q9HBG6 1241 aa15.17■□□□□ 0.02
CHD3-209ENST00000473376 AGPAT5Q9NUQ2 364 aa15.17■□□□□ 0.02
CHD3-209ENST00000473376 FAM105AQ9NUU6 356 aa15.17■□□□□ 0.02
CHD3-209ENST00000473376 HCSTQ9UBK5 93 aa15.17■□□□□ 0.02
CHD3-209ENST00000473376 NR2E1Q9Y466 385 aa15.17■□□□□ 0.02
CHD3-209ENST00000473376 PCDHGC5Q9Y5F6 944 aa15.17■□□□□ 0.02
CHD3-209ENST00000473376 CNTNAP2Q9UHC6 1331 aa15.17■□□□□ 0.02
CHD3-209ENST00000473376 WDR81Q562E7 1941 aa15.16■□□□□ 0.02
CHD3-209ENST00000473376 HIDE1A8MVS5 230 aa15.16■□□□□ 0.02
CHD3-209ENST00000473376 IBSPP21815 317 aaPredicted RBP15.16■□□□□ 0.02
CHD3-209ENST00000473376 TECP42680 631 aa15.16■□□□□ 0.02
CHD3-209ENST00000473376 SIGLEC14Q08ET2 396 aa15.16■□□□□ 0.02
CHD3-209ENST00000473376 SCRN1Q12765 414 aa15.16■□□□□ 0.02
CHD3-209ENST00000473376 LETM2Q2VYF4 491 aa15.16■□□□□ 0.02
CHD3-209ENST00000473376 PLPP4Q5VZY2 271 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms