RNA–Protein interactions for RNA: ENST00000473079.1

EPHB3-202, Transcript of EPH receptor B3, humanhuman

TSL 2

Gene EPHB3, Length 486 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-202ENST00000473079 SH2B1Q9NRF2 756 aaPredicted RBP23.22■■□□□ 1.31
EPHB3-202ENST00000473079 BDP1A6H8Y1 2624 aa23.21■■□□□ 1.31
EPHB3-202ENST00000473079 WNT7AO00755 349 aa23.21■■□□□ 1.31
EPHB3-202ENST00000473079 LTBRP36941 435 aa23.21■■□□□ 1.31
EPHB3-202ENST00000473079 POLGP54098 1239 aaPredicted RBP23.21■■□□□ 1.31
EPHB3-202ENST00000473079 HMGN5P82970 282 aaKnown RBP23.21■■□□□ 1.31
EPHB3-202ENST00000473079 SPOUT1Q5T280 376 aaKnown RBP23.21■■□□□ 1.31
EPHB3-202ENST00000473079 KSR1Q8IVT5 923 aa23.21■■□□□ 1.31
EPHB3-202ENST00000473079 PRPF31Q8WWY3 499 aaKnown RBP23.21■■□□□ 1.31
EPHB3-202ENST00000473079 PPP2R3CQ969Q6 453 aa23.21■■□□□ 1.31
EPHB3-202ENST00000473079 C8orf76Q96K31 380 aa23.21■■□□□ 1.31
EPHB3-202ENST00000473079 EIF2AK1Q9BQI3 630 aaKnown RBP23.21■■□□□ 1.31
EPHB3-202ENST00000473079 IFT122Q9HBG6 1241 aa23.21■■□□□ 1.31
EPHB3-202ENST00000473079 COL4A3BPQ9Y5P4 624 aa23.21■■□□□ 1.31
EPHB3-202ENST00000473079 TCF20Q9UGU0 1960 aaKnown RBP23.2■■□□□ 1.3
EPHB3-202ENST00000473079 GRXCR2A6NFK2 248 aa23.2■■□□□ 1.3
EPHB3-202ENST00000473079 LAG3P18627 525 aa23.2■■□□□ 1.3
EPHB3-202ENST00000473079 FOSBP53539 338 aa23.2■■□□□ 1.3
EPHB3-202ENST00000473079 CTTNQ14247 550 aaKnown RBP23.2■■□□□ 1.3
EPHB3-202ENST00000473079 TPH2Q8IWU9 490 aa23.2■■□□□ 1.3
EPHB3-202ENST00000473079 COLGALT1Q8NBJ5 622 aa23.2■■□□□ 1.3
EPHB3-202ENST00000473079 FBXO18Q8NFZ0 1043 aa23.2■■□□□ 1.3
EPHB3-202ENST00000473079 TCP11Q8WWU5 503 aa23.2■■□□□ 1.3
EPHB3-202ENST00000473079 PSPC1Q8WXF1 523 aaKnown RBP23.2■■□□□ 1.3
EPHB3-202ENST00000473079 RSPH1Q8WYR4 309 aa23.2■■□□□ 1.3
EPHB3-202ENST00000473079 FOXP1Q9H334 677 aaPredicted RBP23.2■■□□□ 1.3
EPHB3-202ENST00000473079 CLDND1Q9NY35 253 aa23.2■■□□□ 1.3
EPHB3-202ENST00000473079 FNDC1Q4ZHG4 1894 aaPredicted RBP23.19■■□□□ 1.3
EPHB3-202ENST00000473079 ZBTB39O15060 712 aa23.19■■□□□ 1.3
EPHB3-202ENST00000473079 ASAP2O43150 1006 aa23.19■■□□□ 1.3
EPHB3-202ENST00000473079 FGF18O76093 207 aa23.19■■□□□ 1.3
EPHB3-202ENST00000473079 SKIP12755 728 aa23.19■■□□□ 1.3
EPHB3-202ENST00000473079 TXKP42681 527 aa23.19■■□□□ 1.3
EPHB3-202ENST00000473079 CYP4A11Q02928 519 aa23.19■■□□□ 1.3
EPHB3-202ENST00000473079 ORC2Q13416 577 aaPredicted RBP23.19■■□□□ 1.3
EPHB3-202ENST00000473079 XKR9Q5GH70 373 aa23.19■■□□□ 1.3
EPHB3-202ENST00000473079 PTCRAQ6ISU1 281 aaPredicted RBP23.19■■□□□ 1.3
EPHB3-202ENST00000473079 LRRC55Q6ZSA7 311 aa23.19■■□□□ 1.3
EPHB3-202ENST00000473079 ABI1Q8IZP0 508 aa23.19■■□□□ 1.3
EPHB3-202ENST00000473079 LRRC43Q8N309 656 aa23.19■■□□□ 1.3
EPHB3-202ENST00000473079 NLRP4Q96MN2 994 aa23.19■■□□□ 1.3
EPHB3-202ENST00000473079 ANKEF1Q9NU02 776 aa23.19■■□□□ 1.3
EPHB3-202ENST00000473079 LZTS1Q9Y250 596 aa23.19■■□□□ 1.3
EPHB3-202ENST00000473079 KIAA1671Q9BY89 1806 aa23.19■■□□□ 1.3
EPHB3-202ENST00000473079 H3BQ06 376 aaPredicted RBP23.18■■□□□ 1.3
EPHB3-202ENST00000473079 XRCC6P12956 609 aaKnown RBP eCLIP23.18■■□□□ 1.3
EPHB3-202ENST00000473079 ATF7P17544 494 aaPredicted RBP23.18■■□□□ 1.3
EPHB3-202ENST00000473079 IRS1P35568 1242 aa23.18■■□□□ 1.3
EPHB3-202ENST00000473079 PHKA2P46019 1235 aa23.18■■□□□ 1.3
EPHB3-202ENST00000473079 PLCB3Q01970 1234 aa23.18■■□□□ 1.3
EPHB3-202ENST00000473079 GUCY1B3Q02153 619 aa23.18■■□□□ 1.3
EPHB3-202ENST00000473079 LAMTOR4Q0VGL1 99 aa23.18■■□□□ 1.3
EPHB3-202ENST00000473079 ADAM15Q13444 863 aa23.18■■□□□ 1.3
EPHB3-202ENST00000473079 CLLU1OSQ5K130 101 aa23.18■■□□□ 1.3
EPHB3-202ENST00000473079 PDE12Q6L8Q7 609 aaKnown RBP23.18■■□□□ 1.3
EPHB3-202ENST00000473079 SRGAP1Q7Z6B7 1085 aa23.18■■□□□ 1.3
EPHB3-202ENST00000473079 FAM178BQ8IXR5 827 aa23.18■■□□□ 1.3
EPHB3-202ENST00000473079 TMEM143Q96AN5 459 aa23.18■■□□□ 1.3
EPHB3-202ENST00000473079 HCSTQ9UBK5 93 aa23.18■■□□□ 1.3
EPHB3-202ENST00000473079 FAM50BQ9Y247 325 aa23.18■■□□□ 1.3
EPHB3-202ENST00000473079 ZNF623O75123 536 aa23.17■■□□□ 1.3
EPHB3-202ENST00000473079 EMC2Q15006 297 aa23.17■■□□□ 1.3
EPHB3-202ENST00000473079 CATSPER4Q7RTX7 472 aa23.17■■□□□ 1.3
EPHB3-202ENST00000473079 THNSL1Q8IYQ7 743 aa23.17■■□□□ 1.3
EPHB3-202ENST00000473079 TMEM60Q9H2L4 133 aa23.17■■□□□ 1.3
EPHB3-202ENST00000473079 BRWD1Q9NSI6 2320 aa23.17■■□□□ 1.3
EPHB3-202ENST00000473079 RAB27AP51159 221 aa23.16■■□□□ 1.3
EPHB3-202ENST00000473079 TWF2Q6IBS0 349 aaKnown RBP23.16■■□□□ 1.3
EPHB3-202ENST00000473079 KCNT2Q6UVM3 1135 aa23.16■■□□□ 1.3
EPHB3-202ENST00000473079 EP400NLQ6ZTU2 488 aa23.16■■□□□ 1.3
EPHB3-202ENST00000473079 FERMT3Q86UX7 667 aa23.16■■□□□ 1.3
EPHB3-202ENST00000473079 EFHBQ8N7U6 833 aa23.16■■□□□ 1.3
EPHB3-202ENST00000473079 RNF169Q8NCN4 708 aa23.16■■□□□ 1.3
EPHB3-202ENST00000473079 MRPL9Q9BYD2 267 aaKnown RBP23.16■■□□□ 1.3
EPHB3-202ENST00000473079 TLR9Q9NR96 1032 aa23.16■■□□□ 1.3
EPHB3-202ENST00000473079 AGPAT5Q9NUQ2 364 aa23.16■■□□□ 1.3
EPHB3-202ENST00000473079 PIN4Q9Y237 131 aaKnown RBP23.16■■□□□ 1.3
EPHB3-202ENST00000473079 SRGAP2CP0DJJ0 459 aa23.15■■□□□ 1.3
EPHB3-202ENST00000473079 IL9P15248 144 aa23.15■■□□□ 1.3
EPHB3-202ENST00000473079 MCM7P33993 719 aa23.15■■□□□ 1.3
EPHB3-202ENST00000473079 GTF2F1P35269 517 aaKnown RBP eCLIP23.15■■□□□ 1.3
EPHB3-202ENST00000473079 PPM1AP35813 382 aa23.15■■□□□ 1.3
EPHB3-202ENST00000473079 POU5F1BQ06416 359 aa23.15■■□□□ 1.3
EPHB3-202ENST00000473079 MXD4Q14582 209 aaPredicted RBP23.15■■□□□ 1.3
EPHB3-202ENST00000473079 RABEP1Q15276 862 aa23.15■■□□□ 1.3
EPHB3-202ENST00000473079 PCBP1Q15365 356 aaKnown RBP eCLIP23.15■■□□□ 1.3
EPHB3-202ENST00000473079 ADGRD2Q7Z7M1 963 aa23.15■■□□□ 1.3
EPHB3-202ENST00000473079 FAM184AQ8NB25 1140 aa23.15■■□□□ 1.3
EPHB3-202ENST00000473079 MRPS27Q92552 414 aaKnown RBP23.15■■□□□ 1.3
EPHB3-202ENST00000473079 ZNF558Q96NG5 402 aa23.15■■□□□ 1.3
EPHB3-202ENST00000473079 MTRQ99707 1265 aa23.15■■□□□ 1.3
EPHB3-202ENST00000473079 IGFLR1Q9H665 355 aa23.15■■□□□ 1.3
EPHB3-202ENST00000473079 XPNPEP1Q9NQW7 623 aa23.15■■□□□ 1.3
EPHB3-202ENST00000473079 FAM105AQ9NUU6 356 aa23.15■■□□□ 1.3
EPHB3-202ENST00000473079 PUF60Q9UHX1 559 aaKnown RBP23.15■■□□□ 1.3
EPHB3-202ENST00000473079 NCOR1O75376 2440 aa23.15■■□□□ 1.3
EPHB3-202ENST00000473079 ATG2AQ2TAZ0 1938 aa23.15■■□□□ 1.3
EPHB3-202ENST00000473079 DGAT1O75907 488 aa23.14■■□□□ 1.29
EPHB3-202ENST00000473079 TRAPPC10P48553 1259 aa23.14■■□□□ 1.29
EPHB3-202ENST00000473079 DLX2Q07687 328 aaPredicted RBP23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms