RNA–Protein interactions for RNA: ENST00000472490.1

BRCA1-211, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-211ENST00000472490 IFT122Q9HBG6 1241 aa15.76■□□□□ 0.11
BRCA1-211ENST00000472490 CHST12Q9NRB3 414 aa15.76■□□□□ 0.11
BRCA1-211ENST00000472490 DACT1Q9NYF0 836 aa15.76■□□□□ 0.11
BRCA1-211ENST00000472490 INSL6Q9Y581 213 aa15.76■□□□□ 0.11
BRCA1-211ENST00000472490 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.75■□□□□ 0.11
BRCA1-211ENST00000472490 E9PMD0 336 aa15.75■□□□□ 0.11
BRCA1-211ENST00000472490 STAG3L1P0CL83 205 aa15.75■□□□□ 0.11
BRCA1-211ENST00000472490 KRT85P78386 507 aa15.75■□□□□ 0.11
BRCA1-211ENST00000472490 GRB10Q13322 594 aa15.75■□□□□ 0.11
BRCA1-211ENST00000472490 FOXD4L6Q3SYB3 417 aaPredicted RBP15.75■□□□□ 0.11
BRCA1-211ENST00000472490 TMEM119Q4V9L6 283 aa15.75■□□□□ 0.11
BRCA1-211ENST00000472490 FOXD4L3Q6VB84 417 aaPredicted RBP15.75■□□□□ 0.11
BRCA1-211ENST00000472490 SLC24A5Q71RS6 500 aa15.75■□□□□ 0.11
BRCA1-211ENST00000472490 SYT2Q8N9I0 419 aaPredicted RBP15.75■□□□□ 0.11
BRCA1-211ENST00000472490 IFT74Q96LB3 600 aa15.75■□□□□ 0.11
BRCA1-211ENST00000472490 DRC1Q96MC2 740 aa15.75■□□□□ 0.11
BRCA1-211ENST00000472490 RAD9AQ99638 391 aa15.75■□□□□ 0.11
BRCA1-211ENST00000472490 ADAM2Q99965 735 aa15.75■□□□□ 0.11
BRCA1-211ENST00000472490 RGS18Q9NS28 235 aa15.75■□□□□ 0.11
BRCA1-211ENST00000472490 KCNG1Q9UIX4 513 aa15.75■□□□□ 0.11
BRCA1-211ENST00000472490 CEP290O15078 2479 aa15.75■□□□□ 0.11
BRCA1-211ENST00000472490 ERLIN2O94905 339 aa15.74■□□□□ 0.11
BRCA1-211ENST00000472490 SSBP05455 408 aaKnown RBP eCLIP15.74■□□□□ 0.11
BRCA1-211ENST00000472490 PLA2G4BP0C869 781 aa15.74■□□□□ 0.11
BRCA1-211ENST00000472490 RABGGTBP53611 331 aa15.74■□□□□ 0.11
BRCA1-211ENST00000472490 PTENP60484 403 aa15.74■□□□□ 0.11
BRCA1-211ENST00000472490 GRIN1Q05586 938 aa15.74■□□□□ 0.11
BRCA1-211ENST00000472490 CATSPER4Q7RTX7 472 aa15.74■□□□□ 0.11
BRCA1-211ENST00000472490 NPAS4Q8IUM7 802 aa15.74■□□□□ 0.11
BRCA1-211ENST00000472490 SYMPKQ92797 1274 aaKnown RBP15.74■□□□□ 0.11
BRCA1-211ENST00000472490 PNMA5Q96PV4 448 aa15.74■□□□□ 0.11
BRCA1-211ENST00000472490 YME1L1Q96TA2 773 aa15.74■□□□□ 0.11
BRCA1-211ENST00000472490 PLIN2Q99541 437 aa15.74■□□□□ 0.11
BRCA1-211ENST00000472490 C2orf40Q9H1Z8 148 aa15.74■□□□□ 0.11
BRCA1-211ENST00000472490 C17orf75Q9HAS0 396 aa15.74■□□□□ 0.11
BRCA1-211ENST00000472490 LRFN2Q9ULH4 789 aa15.74■□□□□ 0.11
BRCA1-211ENST00000472490 TRIP12Q14669 1992 aaPredicted RBP15.74■□□□□ 0.11
BRCA1-211ENST00000472490 RANBP2P49792 3224 aaKnown RBP15.74■□□□□ 0.11
BRCA1-211ENST00000472490 LRRIQ4A6NIV6 560 aa15.73■□□□□ 0.11
BRCA1-211ENST00000472490 UPP2O95045 317 aa15.73■□□□□ 0.11
BRCA1-211ENST00000472490 SKIP12755 728 aa15.73■□□□□ 0.11
BRCA1-211ENST00000472490 GLRA2P23416 452 aa15.73■□□□□ 0.11
BRCA1-211ENST00000472490 GUCY2CP25092 1073 aa15.73■□□□□ 0.11
BRCA1-211ENST00000472490 PBX2P40425 430 aa15.73■□□□□ 0.11
BRCA1-211ENST00000472490 NAMPTP43490 491 aa15.73■□□□□ 0.11
BRCA1-211ENST00000472490 ME1P48163 572 aa15.73■□□□□ 0.11
BRCA1-211ENST00000472490 SARSP49591 514 aaKnown RBP15.73■□□□□ 0.11
BRCA1-211ENST00000472490 DNM1Q05193 864 aaKnown RBP15.73■□□□□ 0.11
BRCA1-211ENST00000472490 CAPSQ13938 189 aa15.73■□□□□ 0.11
BRCA1-211ENST00000472490 KARSQ15046 597 aaKnown RBP15.73■□□□□ 0.11
BRCA1-211ENST00000472490 RRAGBQ5VZM2 374 aa15.73■□□□□ 0.11
BRCA1-211ENST00000472490 RINT1Q6NUQ1 792 aa15.73■□□□□ 0.11
BRCA1-211ENST00000472490 CCDC73Q6ZRK6 1079 aa15.73■□□□□ 0.11
BRCA1-211ENST00000472490 IFNLR1Q8IU57 520 aaPredicted RBP15.73■□□□□ 0.11
BRCA1-211ENST00000472490 ZBTB8OSQ8IWT0 167 aa15.73■□□□□ 0.11
BRCA1-211ENST00000472490 EPSTI1Q96J88 318 aa15.73■□□□□ 0.11
BRCA1-211ENST00000472490 CLIC6Q96NY7 704 aa15.73■□□□□ 0.11
BRCA1-211ENST00000472490 TMX1Q9H3N1 280 aa15.73■□□□□ 0.11
BRCA1-211ENST00000472490 GPRC5CQ9NQ84 441 aa15.73■□□□□ 0.11
BRCA1-211ENST00000472490 STK17AQ9UEE5 414 aa15.73■□□□□ 0.11
BRCA1-211ENST00000472490 PCDHB7Q9Y5E2 793 aa15.73■□□□□ 0.11
BRCA1-211ENST00000472490 PHLPP2Q6ZVD8 1323 aa15.72■□□□□ 0.11
BRCA1-211ENST00000472490 SCN5AQ14524 2016 aa15.72■□□□□ 0.11
BRCA1-211ENST00000472490 INO80B-WBP1J3KQ70 363 aa15.72■□□□□ 0.11
BRCA1-211ENST00000472490 CUTAO60888 179 aa15.72■□□□□ 0.11
BRCA1-211ENST00000472490 PLCG1P19174 1290 aa15.72■□□□□ 0.11
BRCA1-211ENST00000472490 NCLP19338 710 aaKnown RBP15.72■□□□□ 0.11
BRCA1-211ENST00000472490 AXLP30530 894 aa15.72■□□□□ 0.11
BRCA1-211ENST00000472490 DDIT3P35638 169 aa15.72■□□□□ 0.11
BRCA1-211ENST00000472490 SLC12A3P55017 1021 aa15.72■□□□□ 0.11
BRCA1-211ENST00000472490 SPECC1Q5M775 1068 aa15.72■□□□□ 0.11
BRCA1-211ENST00000472490 PPP2R2DQ66LE6 453 aa15.72■□□□□ 0.11
BRCA1-211ENST00000472490 FAM117BQ6P1L5 589 aa15.72■□□□□ 0.11
BRCA1-211ENST00000472490 C1orf186Q6ZWK4 172 aa15.72■□□□□ 0.11
BRCA1-211ENST00000472490 KCNK18Q7Z418 384 aa15.72■□□□□ 0.11
BRCA1-211ENST00000472490 RTN4RL1Q86UN2 441 aaPredicted RBP15.72■□□□□ 0.11
BRCA1-211ENST00000472490 DEFB123Q8N688 67 aa15.72■□□□□ 0.11
BRCA1-211ENST00000472490 DEPTORQ8TB45 409 aa15.72■□□□□ 0.11
BRCA1-211ENST00000472490 ASAP3Q8TDY4 903 aa15.72■□□□□ 0.11
BRCA1-211ENST00000472490 LARP4BQ92615 738 aaKnown RBP15.72■□□□□ 0.11
BRCA1-211ENST00000472490 SCAND2PQ9GZW5 306 aaPredicted RBP15.72■□□□□ 0.11
BRCA1-211ENST00000472490 ZNF576Q9H609 170 aa15.72■□□□□ 0.11
BRCA1-211ENST00000472490 ELAC1Q9H777 363 aaKnown RBP15.72■□□□□ 0.11
BRCA1-211ENST00000472490 AGPAT5Q9NUQ2 364 aa15.72■□□□□ 0.11
BRCA1-211ENST00000472490 PIN4Q9Y237 131 aaKnown RBP15.72■□□□□ 0.11
BRCA1-211ENST00000472490 CSDE1O75534 798 aaKnown RBP15.71■□□□□ 0.11
BRCA1-211ENST00000472490 CA3P07451 260 aa15.71■□□□□ 0.11
BRCA1-211ENST00000472490 FGFR4P22455 802 aa15.71■□□□□ 0.11
BRCA1-211ENST00000472490 EFNA5P52803 228 aa15.71■□□□□ 0.11
BRCA1-211ENST00000472490 HTRA4P83105 476 aaPredicted RBP15.71■□□□□ 0.11
BRCA1-211ENST00000472490 DMP1Q13316 513 aaPredicted RBP15.71■□□□□ 0.11
BRCA1-211ENST00000472490 DSC3Q14574 896 aa15.71■□□□□ 0.11
BRCA1-211ENST00000472490 TWF2Q6IBS0 349 aaKnown RBP15.71■□□□□ 0.11
BRCA1-211ENST00000472490 TMCO2Q7Z6W1 182 aaPredicted RBP15.71■□□□□ 0.11
BRCA1-211ENST00000472490 LINC01599Q8WXQ3 324 aa15.71■□□□□ 0.11
BRCA1-211ENST00000472490 RAD54LQ92698 747 aa15.71■□□□□ 0.11
BRCA1-211ENST00000472490 PRIMPOLQ96LW4 560 aa15.71■□□□□ 0.11
BRCA1-211ENST00000472490 TRAIPQ9BWF2 469 aa15.71■□□□□ 0.11
BRCA1-211ENST00000472490 NKX2-4Q9H2Z4 354 aa15.71■□□□□ 0.11
BRCA1-211ENST00000472490 TMEM161AQ9NX61 479 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms